RNA–Protein interactions for RNA: ENST00000566600.1

NME3-209, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 913 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-209ENST00000566600 SLC7A14Q8TBB6 771 aa27.97■■■□□ 2.07
NME3-209ENST00000566600 C2orf15Q8WU43 125 aaKnown RBP27.97■■■□□ 2.07
NME3-209ENST00000566600 FAXDC2Q96IV6 333 aa27.97■■■□□ 2.07
NME3-209ENST00000566600 NECTIN4Q96NY8 510 aa27.97■■■□□ 2.07
NME3-209ENST00000566600 CYP4F11Q9HBI6 524 aa27.97■■■□□ 2.07
NME3-209ENST00000566600 MAGEC2Q9UBF1 373 aaPredicted RBP27.97■■■□□ 2.07
NME3-209ENST00000566600 POLIQ9UNA4 740 aa27.97■■■□□ 2.07
NME3-209ENST00000566600 GNL1P36915 607 aaPredicted RBP27.96■■■□□ 2.07
NME3-209ENST00000566600 NOP14P78316 857 aaKnown RBP27.96■■■□□ 2.07
NME3-209ENST00000566600 SMAD2Q15796 467 aaKnown RBP27.96■■■□□ 2.07
NME3-209ENST00000566600 NFE2Q16621 373 aaPredicted RBP27.96■■■□□ 2.07
NME3-209ENST00000566600 SLC39A12Q504Y0 691 aa27.96■■■□□ 2.07
NME3-209ENST00000566600 CREBRFQ8IUR6 639 aa27.96■■■□□ 2.07
NME3-209ENST00000566600 SUSD6Q92537 303 aa27.96■■■□□ 2.07
NME3-209ENST00000566600 TMEM209Q96SK2 561 aa27.96■■■□□ 2.07
NME3-209ENST00000566600 MRPL45Q9BRJ2 306 aaKnown RBP27.96■■■□□ 2.07
NME3-209ENST00000566600 PRKD2Q9BZL6 878 aa27.96■■■□□ 2.07
NME3-209ENST00000566600 NAT10Q9H0A0 1025 aaKnown RBP27.96■■■□□ 2.07
NME3-209ENST00000566600 HSFX1Q9UBD0 423 aa27.96■■■□□ 2.07
NME3-209ENST00000566600 XIRP2A4UGR9 3374 aa27.95■■■□□ 2.07
NME3-209ENST00000566600 RFPL2O75678 378 aa27.95■■■□□ 2.06
NME3-209ENST00000566600 AFPP02771 609 aaKnown RBP27.95■■■□□ 2.06
NME3-209ENST00000566600 POU2F2P09086 479 aa27.95■■■□□ 2.06
NME3-209ENST00000566600 BMP1P13497 986 aa27.95■■■□□ 2.06
NME3-209ENST00000566600 KCNH2Q12809 1159 aa27.95■■■□□ 2.06
NME3-209ENST00000566600 INTS6LQ5JSJ4 861 aaKnown RBP27.95■■■□□ 2.06
NME3-209ENST00000566600 IRF2BP1Q8IU81 584 aa27.95■■■□□ 2.06
NME3-209ENST00000566600 OR6B3Q8NGW1 331 aa27.95■■■□□ 2.06
NME3-209ENST00000566600 PI4K2AQ9BTU6 479 aa27.95■■■□□ 2.06
NME3-209ENST00000566600 NIF3L1Q9GZT8 377 aa27.95■■■□□ 2.06
NME3-209ENST00000566600 CDH9Q9ULB4 789 aa27.95■■■□□ 2.06
NME3-209ENST00000566600 MTMR11A4FU01 709 aa27.94■■■□□ 2.06
NME3-209ENST00000566600 XYLBO75191 536 aa27.94■■■□□ 2.06
NME3-209ENST00000566600 CBX2Q14781 532 aaPredicted RBP27.94■■■□□ 2.06
NME3-209ENST00000566600 SPOPLQ6IQ16 392 aa27.94■■■□□ 2.06
NME3-209ENST00000566600 SMG7Q92540 1137 aaKnown RBP27.94■■■□□ 2.06
NME3-209ENST00000566600 SEMA4DQ92854 862 aa27.94■■■□□ 2.06
NME3-209ENST00000566600 PGLYRP2Q96PD5 576 aa27.94■■■□□ 2.06
NME3-209ENST00000566600 SMYD3Q9H7B4 428 aa27.94■■■□□ 2.06
NME3-209ENST00000566600 CYP3A43Q9HB55 503 aa27.94■■■□□ 2.06
NME3-209ENST00000566600 PIDD1Q9HB75 910 aa27.94■■■□□ 2.06
NME3-209ENST00000566600 SEC24AO95486 1093 aa27.93■■■□□ 2.06
NME3-209ENST00000566600 LRG1P02750 347 aa27.93■■■□□ 2.06
NME3-209ENST00000566600 ACAT1P24752 427 aaKnown RBP27.93■■■□□ 2.06
NME3-209ENST00000566600 MTIF2P46199 727 aaKnown RBP27.93■■■□□ 2.06
NME3-209ENST00000566600 MAPRE1Q15691 268 aaKnown RBP27.93■■■□□ 2.06
NME3-209ENST00000566600 SCARA5Q6ZMJ2 495 aa27.93■■■□□ 2.06
NME3-209ENST00000566600 C11orf57Q6ZUT1 292 aaPredicted RBP27.93■■■□□ 2.06
NME3-209ENST00000566600 SPPL2BQ8TCT7 592 aa27.93■■■□□ 2.06
NME3-209ENST00000566600 ZNF707Q96C28 371 aaPredicted RBP27.93■■■□□ 2.06
NME3-209ENST00000566600 SYT15Q9BQS2 421 aa27.93■■■□□ 2.06
NME3-209ENST00000566600 BCO2Q9BYV7 579 aa27.93■■■□□ 2.06
NME3-209ENST00000566600 DNAJC25Q9H1X3 360 aa27.93■■■□□ 2.06
NME3-209ENST00000566600 NFE2L3Q9Y4A8 694 aa27.93■■■□□ 2.06
NME3-209ENST00000566600 INSL5Q9Y5Q6 135 aa27.93■■■□□ 2.06
NME3-209ENST00000566600 LMO2P25791 158 aa27.92■■■□□ 2.06
NME3-209ENST00000566600 ASPAP45381 313 aa27.92■■■□□ 2.06
NME3-209ENST00000566600 PLD1Q13393 1074 aa27.92■■■□□ 2.06
NME3-209ENST00000566600 LRRTM3Q86VH5 581 aa27.92■■■□□ 2.06
NME3-209ENST00000566600 TTC39CQ8N584 583 aa27.92■■■□□ 2.06
NME3-209ENST00000566600 ELMO3Q96BJ8 720 aa27.92■■■□□ 2.06
NME3-209ENST00000566600 DNAI2Q9GZS0 605 aa27.92■■■□□ 2.06
NME3-209ENST00000566600 FAM124BQ9H5Z6 455 aaPredicted RBP27.92■■■□□ 2.06
NME3-209ENST00000566600 APOBEC3GQ9HC16 384 aaKnown RBP27.92■■■□□ 2.06
NME3-209ENST00000566600 PRKAG3Q9UGI9 489 aa27.92■■■□□ 2.06
NME3-209ENST00000566600 PCDHB5Q9Y5E4 795 aa27.92■■■□□ 2.06
NME3-209ENST00000566600 SPTBN5Q9NRC6 3674 aaKnown RBP27.91■■■□□ 2.06
NME3-209ENST00000566600 A8MXQ7 604 aa27.91■■■□□ 2.06
NME3-209ENST00000566600 PDGFRBP09619 1106 aa27.91■■■□□ 2.06
NME3-209ENST00000566600 IL9P15248 144 aa27.91■■■□□ 2.06
NME3-209ENST00000566600 EEF1GP26641 437 aaKnown RBP27.91■■■□□ 2.06
NME3-209ENST00000566600 TUFMP49411 452 aaKnown RBP27.91■■■□□ 2.06
NME3-209ENST00000566600 CDH8P55286 799 aa27.91■■■□□ 2.06
NME3-209ENST00000566600 MYL5Q02045 173 aa27.91■■■□□ 2.06
NME3-209ENST00000566600 DUSP4Q13115 394 aa27.91■■■□□ 2.06
NME3-209ENST00000566600 ATAD1Q8NBU5 361 aa27.91■■■□□ 2.06
NME3-209ENST00000566600 UTP3Q9NQZ2 479 aaKnown RBP eCLIP27.91■■■□□ 2.06
NME3-209ENST00000566600 CCL16O15467 120 aa27.9■■■□□ 2.06
NME3-209ENST00000566600 VNN2O95498 520 aa27.9■■■□□ 2.06
NME3-209ENST00000566600 PRKCSHP14314 528 aaPredicted RBP27.9■■■□□ 2.06
NME3-209ENST00000566600 TRIM21P19474 475 aaKnown RBP27.9■■■□□ 2.06
NME3-209ENST00000566600 RAP1GAPP47736 663 aa27.9■■■□□ 2.06
NME3-209ENST00000566600 FAM171BQ6P995 826 aa27.9■■■□□ 2.06
NME3-209ENST00000566600 C4orf50Q6ZRC1 276 aa27.9■■■□□ 2.06
NME3-209ENST00000566600 UNC93AQ86WB7 457 aa27.9■■■□□ 2.06
NME3-209ENST00000566600 ELMOD1Q8N336 334 aa27.9■■■□□ 2.06
NME3-209ENST00000566600 TNIP3Q96KP6 325 aa27.9■■■□□ 2.06
NME3-209ENST00000566600 PKMYT1Q99640 499 aa27.9■■■□□ 2.06
NME3-209ENST00000566600 SDCBP2Q9H190 292 aa27.9■■■□□ 2.06
NME3-209ENST00000566600 ABCB6Q9NP58 842 aa27.9■■■□□ 2.06
NME3-209ENST00000566600 GTF3C4Q9UKN8 822 aa27.9■■■□□ 2.06
NME3-209ENST00000566600 KCNJ18B7U540 433 aa27.89■■■□□ 2.06
NME3-209ENST00000566600 WEE2P0C1S8 567 aa27.89■■■□□ 2.06
NME3-209ENST00000566600 ALDH1A3P47895 512 aa27.89■■■□□ 2.06
NME3-209ENST00000566600 KCNJ12Q14500 433 aa27.89■■■□□ 2.06
NME3-209ENST00000566600 MAN2A1Q16706 1144 aa27.89■■■□□ 2.06
NME3-209ENST00000566600 ANO6Q4KMQ2 910 aa27.89■■■□□ 2.06
NME3-209ENST00000566600 SPATA2LQ8IUW3 424 aaPredicted RBP27.89■■■□□ 2.06
NME3-209ENST00000566600 FUBP3Q96I24 572 aaKnown RBP eCLIP27.89■■■□□ 2.06
NME3-209ENST00000566600 PHF7Q9BWX1 381 aaPredicted RBP27.89■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms