RNA–Protein interactions for RNA: ENST00000566550.1

HERPUD1-211, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 511 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-211ENST00000566550 VAMP2P63027 116 aa3.72□□□□□ -1.81
HERPUD1-211ENST00000566550 NOMO3P69849 1222 aa3.72□□□□□ -1.81
HERPUD1-211ENST00000566550 ZNF200P98182 395 aaPredicted RBP3.72□□□□□ -1.81
HERPUD1-211ENST00000566550 CHRNDQ07001 517 aa3.72□□□□□ -1.81
HERPUD1-211ENST00000566550 RAB32Q13637 225 aa3.72□□□□□ -1.81
HERPUD1-211ENST00000566550 BECN1Q14457 450 aa3.72□□□□□ -1.81
HERPUD1-211ENST00000566550 WTAPQ15007 396 aa3.72□□□□□ -1.81
HERPUD1-211ENST00000566550 RASA2Q15283 850 aa3.72□□□□□ -1.81
HERPUD1-211ENST00000566550 ATP2B3Q16720 1220 aa3.72□□□□□ -1.81
HERPUD1-211ENST00000566550 ZXDCQ2QGD7 858 aaPredicted RBP3.72□□□□□ -1.81
HERPUD1-211ENST00000566550 GAB4Q2WGN9 574 aa3.72□□□□□ -1.81
HERPUD1-211ENST00000566550 HECTD3Q5T447 861 aa3.72□□□□□ -1.81
HERPUD1-211ENST00000566550 ATG16L1Q676U5 607 aa3.72□□□□□ -1.81
HERPUD1-211ENST00000566550 CRTC1Q6UUV9 634 aa3.72□□□□□ -1.81
HERPUD1-211ENST00000566550 KDELC2Q7Z4H8 507 aa3.72□□□□□ -1.81
HERPUD1-211ENST00000566550 GALNTL5Q7Z4T8 443 aa3.72□□□□□ -1.81
HERPUD1-211ENST00000566550 MILR1Q7Z6M3 343 aa3.72□□□□□ -1.81
HERPUD1-211ENST00000566550 MICU3Q86XE3 530 aa3.72□□□□□ -1.81
HERPUD1-211ENST00000566550 DCP2Q8IU60 420 aaKnown RBP3.72□□□□□ -1.81
HERPUD1-211ENST00000566550 PQLC1Q8N2U9 271 aa3.72□□□□□ -1.81
HERPUD1-211ENST00000566550 ZGPATQ8N5A5 531 aaKnown RBP3.72□□□□□ -1.81
HERPUD1-211ENST00000566550 ZMIZ2Q8NF64 920 aa3.72□□□□□ -1.81
HERPUD1-211ENST00000566550 OR56A3Q8NH54 315 aa3.72□□□□□ -1.81
HERPUD1-211ENST00000566550 WDR48Q8TAF3 677 aa3.72□□□□□ -1.81
HERPUD1-211ENST00000566550 CYP2W1Q8TAV3 490 aa3.72□□□□□ -1.81
HERPUD1-211ENST00000566550 IFI44Q8TCB0 444 aa3.72□□□□□ -1.81
HERPUD1-211ENST00000566550 PHOSPHO1Q8TCT1 267 aa3.72□□□□□ -1.81
HERPUD1-211ENST00000566550 ADAMTS15Q8TE58 950 aa3.72□□□□□ -1.81
HERPUD1-211ENST00000566550 C3orf49Q96BT1 292 aa3.72□□□□□ -1.81
HERPUD1-211ENST00000566550 SYTL4Q96C24 671 aaPredicted RBP3.72□□□□□ -1.81
HERPUD1-211ENST00000566550 SNX27Q96L92 541 aa3.72□□□□□ -1.81
HERPUD1-211ENST00000566550 JAKMIP1Q96N16 626 aaKnown RBP3.72□□□□□ -1.81
HERPUD1-211ENST00000566550 TWNKQ96RR1 684 aa3.72□□□□□ -1.81
HERPUD1-211ENST00000566550 RTKNQ9BST9 563 aa3.72□□□□□ -1.81
HERPUD1-211ENST00000566550 TXLNGYQ9BZA5 131 aa3.72□□□□□ -1.81
HERPUD1-211ENST00000566550 OSBPL6Q9BZF3 934 aa3.72□□□□□ -1.81
HERPUD1-211ENST00000566550 ARHGAP39Q9C0H5 1083 aa3.72□□□□□ -1.81
HERPUD1-211ENST00000566550 PDGFDQ9GZP0 370 aaPredicted RBP3.72□□□□□ -1.81
HERPUD1-211ENST00000566550 PCDHAC1Q9H158 963 aa3.72□□□□□ -1.81
HERPUD1-211ENST00000566550 SLC6A17Q9H1V8 727 aa3.72□□□□□ -1.81
HERPUD1-211ENST00000566550 CHST8Q9H2A9 424 aa3.72□□□□□ -1.81
HERPUD1-211ENST00000566550 PABPC3Q9H361 631 aaKnown RBP3.72□□□□□ -1.81
HERPUD1-211ENST00000566550 ZWILCHQ9H900 591 aa3.72□□□□□ -1.81
HERPUD1-211ENST00000566550 HEYLQ9NQ87 328 aaPredicted RBP3.72□□□□□ -1.81
HERPUD1-211ENST00000566550 NECTIN3Q9NQS3 549 aa3.72□□□□□ -1.81
HERPUD1-211ENST00000566550 PLSCR4Q9NRQ2 329 aa3.72□□□□□ -1.81
HERPUD1-211ENST00000566550 SEMA3GQ9NS98 782 aa3.72□□□□□ -1.81
HERPUD1-211ENST00000566550 ATP8A2Q9NTI2 1148 aa3.72□□□□□ -1.81
HERPUD1-211ENST00000566550 LPAR3Q9UBY5 353 aa3.72□□□□□ -1.81
HERPUD1-211ENST00000566550 MID2Q9UJV3 735 aa3.72□□□□□ -1.81
HERPUD1-211ENST00000566550 ACAD8Q9UKU7 415 aa3.72□□□□□ -1.81
HERPUD1-211ENST00000566550 TBX20Q9UMR3 447 aa3.72□□□□□ -1.81
HERPUD1-211ENST00000566550 CAMK2AQ9UQM7 478 aa3.72□□□□□ -1.81
HERPUD1-211ENST00000566550 TBC1D30Q9Y2I9 924 aa3.72□□□□□ -1.81
HERPUD1-211ENST00000566550 ZNF711Q9Y462 761 aa3.72□□□□□ -1.81
HERPUD1-211ENST00000566550 RB1CC1Q8TDY2 1594 aa3.72□□□□□ -1.81
HERPUD1-211ENST00000566550 CC2D2AQ9P2K1 1620 aa3.71□□□□□ -1.82
HERPUD1-211ENST00000566550 TCRBV5S2A0A599 114 aa3.71□□□□□ -1.82
HERPUD1-211ENST00000566550 H0Y3Z8 333 aa3.71□□□□□ -1.82
HERPUD1-211ENST00000566550 MASP2O00187 686 aa3.71□□□□□ -1.82
HERPUD1-211ENST00000566550 RAB27BO00194 218 aa3.71□□□□□ -1.82
HERPUD1-211ENST00000566550 F2RL2O00254 374 aa3.71□□□□□ -1.82
HERPUD1-211ENST00000566550 CLGNO14967 610 aa3.71□□□□□ -1.82
HERPUD1-211ENST00000566550 DNPH1O43598 174 aa3.71□□□□□ -1.82
HERPUD1-211ENST00000566550 PEX10O60683 326 aa3.71□□□□□ -1.82
HERPUD1-211ENST00000566550 PTP4A3O75365 173 aa3.71□□□□□ -1.82
HERPUD1-211ENST00000566550 GPR32O75388 356 aa3.71□□□□□ -1.82
HERPUD1-211ENST00000566550 FAM155BO75949 473 aa3.71□□□□□ -1.82
HERPUD1-211ENST00000566550 MPIG6BO95866 241 aa3.71□□□□□ -1.82
HERPUD1-211ENST00000566550 MSL3P1P0C860 447 aa3.71□□□□□ -1.82
HERPUD1-211ENST00000566550 PECAM1P16284 738 aaPredicted RBP3.71□□□□□ -1.82
HERPUD1-211ENST00000566550 PORP16435 677 aaPredicted RBP3.71□□□□□ -1.82
HERPUD1-211ENST00000566550 NPPBP16860 134 aa3.71□□□□□ -1.82
HERPUD1-211ENST00000566550 DDCP20711 480 aa3.71□□□□□ -1.82
HERPUD1-211ENST00000566550 MAPK4P31152 587 aa3.71□□□□□ -1.82
HERPUD1-211ENST00000566550 HOXC13P31276 330 aa3.71□□□□□ -1.82
HERPUD1-211ENST00000566550 HOXD13P35453 343 aa3.71□□□□□ -1.82
HERPUD1-211ENST00000566550 GGT5P36269 586 aa3.71□□□□□ -1.82
HERPUD1-211ENST00000566550 ATP6V1E1P36543 226 aa3.71□□□□□ -1.82
HERPUD1-211ENST00000566550 KCNC1P48547 511 aa3.71□□□□□ -1.82
HERPUD1-211ENST00000566550 PIK3CGP48736 1102 aa3.71□□□□□ -1.82
HERPUD1-211ENST00000566550 GPR15P49685 360 aa3.71□□□□□ -1.82
HERPUD1-211ENST00000566550 GALK1P51570 392 aa3.71□□□□□ -1.82
HERPUD1-211ENST00000566550 BCAT1P54687 386 aa3.71□□□□□ -1.82
HERPUD1-211ENST00000566550 DBPQ10586 325 aaPredicted RBP3.71□□□□□ -1.82
HERPUD1-211ENST00000566550 CTBP1Q13363 440 aa3.71□□□□□ -1.82
HERPUD1-211ENST00000566550 TDGQ13569 410 aa3.71□□□□□ -1.82
HERPUD1-211ENST00000566550 RPS6KA2Q15349 733 aa3.71□□□□□ -1.82
HERPUD1-211ENST00000566550 UBE3CQ15386 1083 aa3.71□□□□□ -1.82
HERPUD1-211ENST00000566550 GPR68Q15743 365 aa3.71□□□□□ -1.82
HERPUD1-211ENST00000566550 TBCEQ15813 527 aaPredicted RBP3.71□□□□□ -1.82
HERPUD1-211ENST00000566550 BTBD16Q32M84 506 aa3.71□□□□□ -1.82
HERPUD1-211ENST00000566550 TMTC4Q5T4D3 741 aa3.71□□□□□ -1.82
HERPUD1-211ENST00000566550 DCAF12L1Q5VU92 463 aa3.71□□□□□ -1.82
HERPUD1-211ENST00000566550 BICRALQ6AI39 1079 aa3.71□□□□□ -1.82
HERPUD1-211ENST00000566550 NFRKBQ6P4R8 1299 aa3.71□□□□□ -1.82
HERPUD1-211ENST00000566550 ABHD15Q6UXT9 468 aa3.71□□□□□ -1.82
HERPUD1-211ENST00000566550 CEP128Q6ZU80 1094 aa3.71□□□□□ -1.82
HERPUD1-211ENST00000566550 IRF2BP1Q8IU81 584 aa3.71□□□□□ -1.82
HERPUD1-211ENST00000566550 TMEM57Q8N5G2 664 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms