RNA–Protein interactions for RNA: ENST00000566493.1

UBR1-206, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 598 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-206ENST00000566493 L1TD1Q5T7N2 865 aaKnown RBP12.88□□□□□ -0.35
UBR1-206ENST00000566493 WSCD1Q658N2 575 aa12.88□□□□□ -0.35
UBR1-206ENST00000566493 CRELD2Q6UXH1 353 aaPredicted RBP12.88□□□□□ -0.35
UBR1-206ENST00000566493 GAREM2Q75VX8 874 aa12.88□□□□□ -0.35
UBR1-206ENST00000566493 DCLK2Q8N568 766 aa12.88□□□□□ -0.35
UBR1-206ENST00000566493 TTC9BQ8N6N2 239 aa12.88□□□□□ -0.35
UBR1-206ENST00000566493 SUMF1Q8NBK3 374 aa12.88□□□□□ -0.35
UBR1-206ENST00000566493 ZBTB44Q8NCP5 570 aa12.88□□□□□ -0.35
UBR1-206ENST00000566493 SPPL2BQ8TCT7 592 aa12.88□□□□□ -0.35
UBR1-206ENST00000566493 CACTINQ8WUQ7 758 aaKnown RBP12.88□□□□□ -0.35
UBR1-206ENST00000566493 LPIN3Q9BQK8 851 aa12.88□□□□□ -0.35
UBR1-206ENST00000566493 FAM213AQ9BRX8 229 aa12.88□□□□□ -0.35
UBR1-206ENST00000566493 C8orf33Q9H7E9 229 aaPredicted RBP12.88□□□□□ -0.35
UBR1-206ENST00000566493 PRMT8Q9NR22 394 aaPredicted RBP12.88□□□□□ -0.35
UBR1-206ENST00000566493 NUP210Q8TEM1 1887 aaPredicted RBP12.87□□□□□ -0.35
UBR1-206ENST00000566493 SHISA7A6NL88 538 aa12.87□□□□□ -0.35
UBR1-206ENST00000566493 PPP1R37O75864 691 aa12.87□□□□□ -0.35
UBR1-206ENST00000566493 ADSSP30520 456 aa12.87□□□□□ -0.35
UBR1-206ENST00000566493 CCR3P51677 355 aa12.87□□□□□ -0.35
UBR1-206ENST00000566493 CDR1P51861 262 aa12.87□□□□□ -0.35
UBR1-206ENST00000566493 TSPY1Q01534 308 aa12.87□□□□□ -0.35
UBR1-206ENST00000566493 STXBP5Q5T5C0 1151 aa12.87□□□□□ -0.35
UBR1-206ENST00000566493 FAM173BQ6P4H8 233 aa12.87□□□□□ -0.35
UBR1-206ENST00000566493 EFCAB13Q8IY85 973 aa12.87□□□□□ -0.35
UBR1-206ENST00000566493 ZNF687Q8N1G0 1237 aa12.87□□□□□ -0.35
UBR1-206ENST00000566493 GPR161Q8N6U8 529 aaKnown RBP12.87□□□□□ -0.35
UBR1-206ENST00000566493 GIPC2Q8TF65 315 aa12.87□□□□□ -0.35
UBR1-206ENST00000566493 NOC3LQ8WTT2 800 aaKnown RBP12.87□□□□□ -0.35
UBR1-206ENST00000566493 DNAJC19Q96DA6 116 aa12.87□□□□□ -0.35
UBR1-206ENST00000566493 RSPRY1Q96DX4 576 aa12.87□□□□□ -0.35
UBR1-206ENST00000566493 STRA6Q9BX79 667 aa12.87□□□□□ -0.35
UBR1-206ENST00000566493 PANK2Q9BZ23 570 aa12.87□□□□□ -0.35
UBR1-206ENST00000566493 IKZF4Q9H2S9 585 aa12.87□□□□□ -0.35
UBR1-206ENST00000566493 ZSCAN16Q9H4T2 348 aaPredicted RBP12.87□□□□□ -0.35
UBR1-206ENST00000566493 TASP1Q9H6P5 420 aa12.87□□□□□ -0.35
UBR1-206ENST00000566493 PANK4Q9NVE7 773 aa12.87□□□□□ -0.35
UBR1-206ENST00000566493 THG1LQ9NWX6 298 aaKnown RBP12.87□□□□□ -0.35
UBR1-206ENST00000566493 OBP2AQ9NY56 170 aa12.87□□□□□ -0.35
UBR1-206ENST00000566493 ABI2Q9NYB9 513 aaPredicted RBP12.87□□□□□ -0.35
UBR1-206ENST00000566493 RBAKQ9NYW8 714 aaPredicted RBP12.87□□□□□ -0.35
UBR1-206ENST00000566493 ZMYM5Q9UJ78 669 aa12.87□□□□□ -0.35
UBR1-206ENST00000566493 RAB23Q9ULC3 237 aa12.87□□□□□ -0.35
UBR1-206ENST00000566493 R3HCC1Q9Y3T6 440 aaKnown RBP12.87□□□□□ -0.35
UBR1-206ENST00000566493 PCDHB5Q9Y5E4 795 aa12.87□□□□□ -0.35
UBR1-206ENST00000566493 COL4A2P08572 1712 aa12.87□□□□□ -0.35
UBR1-206ENST00000566493 SLC38A8A6NNN8 435 aa12.86□□□□□ -0.35
UBR1-206ENST00000566493 ARNTLO00327 626 aa12.86□□□□□ -0.35
UBR1-206ENST00000566493 HUS1O60921 280 aa12.86□□□□□ -0.35
UBR1-206ENST00000566493 LILRB5O75023 590 aa12.86□□□□□ -0.35
UBR1-206ENST00000566493 HAPLN1P10915 354 aaPredicted RBP12.86□□□□□ -0.35
UBR1-206ENST00000566493 ATF6P18850 670 aa12.86□□□□□ -0.35
UBR1-206ENST00000566493 GARTP22102 1010 aa12.86□□□□□ -0.35
UBR1-206ENST00000566493 POLR2BP30876 1174 aaKnown RBP12.86□□□□□ -0.35
UBR1-206ENST00000566493 CYP4F8P98187 520 aa12.86□□□□□ -0.35
UBR1-206ENST00000566493 PLCB2Q00722 1185 aa12.86□□□□□ -0.35
UBR1-206ENST00000566493 KCNA1Q09470 495 aa12.86□□□□□ -0.35
UBR1-206ENST00000566493 NFE2Q16621 373 aaPredicted RBP12.86□□□□□ -0.35
UBR1-206ENST00000566493 STXBP4Q6ZWJ1 553 aa12.86□□□□□ -0.35
UBR1-206ENST00000566493 RALGPS2Q86X27 583 aaPredicted RBP12.86□□□□□ -0.35
UBR1-206ENST00000566493 BRSK2Q8IWQ3 736 aa12.86□□□□□ -0.35
UBR1-206ENST00000566493 CCDC65Q8IXS2 484 aa12.86□□□□□ -0.35
UBR1-206ENST00000566493 NELL1Q92832 810 aa12.86□□□□□ -0.35
UBR1-206ENST00000566493 SAAL1Q96ER3 474 aa12.86□□□□□ -0.35
UBR1-206ENST00000566493 INTS4Q96HW7 963 aaKnown RBP12.86□□□□□ -0.35
UBR1-206ENST00000566493 EPC1Q9H2F5 836 aa12.86□□□□□ -0.35
UBR1-206ENST00000566493 TMEM206Q9H813 350 aa12.86□□□□□ -0.35
UBR1-206ENST00000566493 OLFML3Q9NRN5 406 aa12.86□□□□□ -0.35
UBR1-206ENST00000566493 AGAP1Q9UPQ3 857 aa12.86□□□□□ -0.35
UBR1-206ENST00000566493 SMG5Q9UPR3 1016 aaKnown RBP12.86□□□□□ -0.35
UBR1-206ENST00000566493 NCANO14594 1321 aa12.86□□□□□ -0.35
UBR1-206ENST00000566493 SPECC1L-ADORA2AF8WAN1 911 aa12.85□□□□□ -0.35
UBR1-206ENST00000566493 EXTL3O43909 919 aa12.85□□□□□ -0.35
UBR1-206ENST00000566493 PRPF40AO75400 957 aaKnown RBP12.85□□□□□ -0.35
UBR1-206ENST00000566493 ITGB3P05106 788 aa12.85□□□□□ -0.35
UBR1-206ENST00000566493 CHRNB1P11230 501 aa12.85□□□□□ -0.35
UBR1-206ENST00000566493 WEE1P30291 646 aa12.85□□□□□ -0.35
UBR1-206ENST00000566493 CXCL12P48061 93 aa12.85□□□□□ -0.35
UBR1-206ENST00000566493 MYL7Q01449 175 aa12.85□□□□□ -0.35
UBR1-206ENST00000566493 BFSP1Q12934 665 aa12.85□□□□□ -0.35
UBR1-206ENST00000566493 PUM1Q14671 1186 aaKnown RBP eCLIP12.85□□□□□ -0.35
UBR1-206ENST00000566493 SLC39A14Q15043 492 aa12.85□□□□□ -0.35
UBR1-206ENST00000566493 STK38Q15208 465 aa12.85□□□□□ -0.35
UBR1-206ENST00000566493 DGKKQ5KSL6 1271 aa12.85□□□□□ -0.35
UBR1-206ENST00000566493 DGLUCYQ7Z3D6 616 aa12.85□□□□□ -0.35
UBR1-206ENST00000566493 LRRTM3Q86VH5 581 aa12.85□□□□□ -0.35
UBR1-206ENST00000566493 CSGALNACT2Q8N6G5 542 aa12.85□□□□□ -0.35
UBR1-206ENST00000566493 CELF5Q8N6W0 485 aaKnown RBP12.85□□□□□ -0.35
UBR1-206ENST00000566493 TTC8Q8TAM2 541 aa12.85□□□□□ -0.35
UBR1-206ENST00000566493 BPIFB1Q8TDL5 484 aa12.85□□□□□ -0.35
UBR1-206ENST00000566493 RMDN1Q96DB5 314 aa12.85□□□□□ -0.35
UBR1-206ENST00000566493 ZFYVE19Q96K21 471 aa12.85□□□□□ -0.35
UBR1-206ENST00000566493 USP28Q96RU2 1077 aa12.85□□□□□ -0.35
UBR1-206ENST00000566493 MKNK1Q9BUB5 465 aa12.85□□□□□ -0.35
UBR1-206ENST00000566493 LRRC27Q9C0I9 530 aa12.85□□□□□ -0.35
UBR1-206ENST00000566493 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.85□□□□□ -0.35
UBR1-206ENST00000566493 GMEB2Q9UKD1 530 aa12.85□□□□□ -0.35
UBR1-206ENST00000566493 ITGA11Q9UKX5 1188 aa12.85□□□□□ -0.35
UBR1-206ENST00000566493 MORC2Q9Y6X9 1032 aaPredicted RBP12.85□□□□□ -0.35
UBR1-206ENST00000566493 MYBPHLA2RUH7 354 aa12.84□□□□□ -0.35
UBR1-206ENST00000566493 GOLGA8IPA6NC78 632 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms