RNA–Protein interactions for RNA: ENST00000566121.1

CMTM3-212, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-212ENST00000566121 ZNF233A6NK53 670 aa16.34■□□□□ 0.21
CMTM3-212ENST00000566121 HEPACAM2A8MVW5 462 aa16.34■□□□□ 0.21
CMTM3-212ENST00000566121 ZNF263O14978 683 aa16.34■□□□□ 0.21
CMTM3-212ENST00000566121 ZSCAN22P10073 491 aaPredicted RBP16.34■□□□□ 0.21
CMTM3-212ENST00000566121 TARSP26639 723 aaKnown RBP16.34■□□□□ 0.21
CMTM3-212ENST00000566121 PLCB2Q00722 1185 aa16.34■□□□□ 0.21
CMTM3-212ENST00000566121 VEPH1Q14D04 833 aa16.34■□□□□ 0.21
CMTM3-212ENST00000566121 SLC39A12Q504Y0 691 aa16.34■□□□□ 0.21
CMTM3-212ENST00000566121 ARHGAP15Q53QZ3 475 aa16.34■□□□□ 0.21
CMTM3-212ENST00000566121 SHC4Q6S5L8 630 aa16.34■□□□□ 0.21
CMTM3-212ENST00000566121 TPRG1Q6ZUI0 275 aa16.34■□□□□ 0.21
CMTM3-212ENST00000566121 ZBTB44Q8NCP5 570 aa16.34■□□□□ 0.21
CMTM3-212ENST00000566121 FUBP3Q96I24 572 aaKnown RBP eCLIP16.34■□□□□ 0.21
CMTM3-212ENST00000566121 TMEM209Q96SK2 561 aa16.34■□□□□ 0.21
CMTM3-212ENST00000566121 PKMYT1Q99640 499 aa16.34■□□□□ 0.21
CMTM3-212ENST00000566121 CBWD1Q9BRT8 395 aa16.34■□□□□ 0.21
CMTM3-212ENST00000566121 IKZF4Q9H2S9 585 aa16.34■□□□□ 0.21
CMTM3-212ENST00000566121 IL21Q9HBE4 155 aa16.34■□□□□ 0.21
CMTM3-212ENST00000566121 PRMT8Q9NR22 394 aaPredicted RBP16.34■□□□□ 0.21
CMTM3-212ENST00000566121 HEBP1Q9NRV9 189 aa16.34■□□□□ 0.21
CMTM3-212ENST00000566121 INTS13Q9NVM9 706 aa16.34■□□□□ 0.21
CMTM3-212ENST00000566121 RCOR1Q9UKL0 485 aa16.34■□□□□ 0.21
CMTM3-212ENST00000566121 CFAP45Q9UL16 551 aa16.34■□□□□ 0.21
CMTM3-212ENST00000566121 SLC27A5Q9Y2P5 690 aa16.34■□□□□ 0.21
CMTM3-212ENST00000566121 MTF2Q9Y483 593 aaPredicted RBP16.34■□□□□ 0.21
CMTM3-212ENST00000566121 PCDHB5Q9Y5E4 795 aa16.34■□□□□ 0.21
CMTM3-212ENST00000566121 CEP250Q9BV73 2442 aa16.34■□□□□ 0.21
CMTM3-212ENST00000566121 A0A1W2PRU2 124 aa16.33■□□□□ 0.2
CMTM3-212ENST00000566121 LAMTOR5O43504 91 aa16.33■□□□□ 0.2
CMTM3-212ENST00000566121 HUS1O60921 280 aa16.33■□□□□ 0.2
CMTM3-212ENST00000566121 HOXD13P35453 343 aa16.33■□□□□ 0.2
CMTM3-212ENST00000566121 TSPY1Q01534 308 aa16.33■□□□□ 0.2
CMTM3-212ENST00000566121 UBXN2BQ14CS0 331 aa16.33■□□□□ 0.2
CMTM3-212ENST00000566121 DUOXA2Q1HG44 320 aa16.33■□□□□ 0.2
CMTM3-212ENST00000566121 BMT2Q1RMZ1 405 aa16.33■□□□□ 0.2
CMTM3-212ENST00000566121 CFAP221Q4G0U5 840 aa16.33■□□□□ 0.2
CMTM3-212ENST00000566121 ARHGAP29Q52LW3 1261 aa16.33■□□□□ 0.2
CMTM3-212ENST00000566121 UNC13DQ70J99 1090 aa16.33■□□□□ 0.2
CMTM3-212ENST00000566121 ARID3BQ8IVW6 561 aaPredicted RBP16.33■□□□□ 0.2
CMTM3-212ENST00000566121 C12orf56Q8IXR9 622 aa16.33■□□□□ 0.2
CMTM3-212ENST00000566121 PDCL2Q8N4E4 241 aa16.33■□□□□ 0.2
CMTM3-212ENST00000566121 PDILTQ8N807 584 aa16.33■□□□□ 0.2
CMTM3-212ENST00000566121 ST13P5Q8NFI4 369 aaPredicted RBP16.33■□□□□ 0.2
CMTM3-212ENST00000566121 TRMT2BQ96GJ1 504 aaKnown RBP16.33■□□□□ 0.2
CMTM3-212ENST00000566121 MYRFLQ96LU7 910 aa16.33■□□□□ 0.2
CMTM3-212ENST00000566121 CHRDQ9H2X0 955 aa16.33■□□□□ 0.2
CMTM3-212ENST00000566121 TBC1D7Q9P0N9 293 aa16.33■□□□□ 0.2
CMTM3-212ENST00000566121 AGAP1Q9UPQ3 857 aa16.33■□□□□ 0.2
CMTM3-212ENST00000566121 MIA3Q5JRA6 1907 aa16.33■□□□□ 0.2
CMTM3-212ENST00000566121 DMXL1Q9Y485 3027 aa16.32■□□□□ 0.2
CMTM3-212ENST00000566121 DCHS1Q96JQ0 3298 aa16.32■□□□□ 0.2
CMTM3-212ENST00000566121 PRPF40AO75400 957 aaKnown RBP16.32■□□□□ 0.2
CMTM3-212ENST00000566121 PRPF6O94906 941 aaKnown RBP16.32■□□□□ 0.2
CMTM3-212ENST00000566121 PAPSS2O95340 614 aaPredicted RBP16.32■□□□□ 0.2
CMTM3-212ENST00000566121 STAU1O95793 577 aaKnown RBP16.32■□□□□ 0.2
CMTM3-212ENST00000566121 ITGB3P05106 788 aa16.32■□□□□ 0.2
CMTM3-212ENST00000566121 CSH1P0DML2 217 aa16.32■□□□□ 0.2
CMTM3-212ENST00000566121 CSH2P0DML3 217 aa16.32■□□□□ 0.2
CMTM3-212ENST00000566121 HMGA1P17096 107 aaKnown RBP16.32■□□□□ 0.2
CMTM3-212ENST00000566121 ATF6P18850 670 aa16.32■□□□□ 0.2
CMTM3-212ENST00000566121 PCSK1P29120 753 aa16.32■□□□□ 0.2
CMTM3-212ENST00000566121 POLR2BP30876 1174 aaKnown RBP16.32■□□□□ 0.2
CMTM3-212ENST00000566121 GDI1P31150 447 aa16.32■□□□□ 0.2
CMTM3-212ENST00000566121 VIPR2P41587 438 aa16.32■□□□□ 0.2
CMTM3-212ENST00000566121 WNT7BP56706 349 aa16.32■□□□□ 0.2
CMTM3-212ENST00000566121 TFAMQ00059 246 aaKnown RBP16.32■□□□□ 0.2
CMTM3-212ENST00000566121 FOXK2Q01167 660 aa16.32■□□□□ 0.2
CMTM3-212ENST00000566121 MYL7Q01449 175 aa16.32■□□□□ 0.2
CMTM3-212ENST00000566121 FAM171BQ6P995 826 aa16.32■□□□□ 0.2
CMTM3-212ENST00000566121 WDR49Q8IV35 697 aa16.32■□□□□ 0.2
CMTM3-212ENST00000566121 SYNPOQ8N3V7 929 aa16.32■□□□□ 0.2
CMTM3-212ENST00000566121 CSGALNACT2Q8N6G5 542 aa16.32■□□□□ 0.2
CMTM3-212ENST00000566121 SAAL1Q96ER3 474 aa16.32■□□□□ 0.2
CMTM3-212ENST00000566121 ANKRD36BP1Q96IX9 119 aa16.32■□□□□ 0.2
CMTM3-212ENST00000566121 FGFBP2Q9BYJ0 223 aa16.32■□□□□ 0.2
CMTM3-212ENST00000566121 ATXN3LQ9H3M9 355 aa16.32■□□□□ 0.2
CMTM3-212ENST00000566121 TFIP11Q9UBB9 837 aaKnown RBP16.32■□□□□ 0.2
CMTM3-212ENST00000566121 SIX4Q9UIU6 781 aa16.32■□□□□ 0.2
CMTM3-212ENST00000566121 L1RE1Q9UN81 338 aa16.32■□□□□ 0.2
CMTM3-212ENST00000566121 TSC2P49815 1807 aa16.31■□□□□ 0.2
CMTM3-212ENST00000566121 MYBPHLA2RUH7 354 aa16.31■□□□□ 0.2
CMTM3-212ENST00000566121 TGFB1I1O43294 461 aa16.31■□□□□ 0.2
CMTM3-212ENST00000566121 LILRB5O75023 590 aa16.31■□□□□ 0.2
CMTM3-212ENST00000566121 LRRN2O75325 713 aa16.31■□□□□ 0.2
CMTM3-212ENST00000566121 F13A1P00488 732 aa16.31■□□□□ 0.2
CMTM3-212ENST00000566121 F11P03951 625 aa16.31■□□□□ 0.2
CMTM3-212ENST00000566121 GABRR2P28476 465 aa16.31■□□□□ 0.2
CMTM3-212ENST00000566121 MAGEA11P43364 429 aa16.31■□□□□ 0.2
CMTM3-212ENST00000566121 NRLP54845 237 aa16.31■□□□□ 0.2
CMTM3-212ENST00000566121 RPL10AP62906 217 aaKnown RBP16.31■□□□□ 0.2
CMTM3-212ENST00000566121 MYO1EQ12965 1108 aa16.31■□□□□ 0.2
CMTM3-212ENST00000566121 ZNF268Q14587 947 aaPredicted RBP16.31■□□□□ 0.2
CMTM3-212ENST00000566121 FAM26FQ5R3K3 315 aa16.31■□□□□ 0.2
CMTM3-212ENST00000566121 RESP18Q5W5W9 173 aa16.31■□□□□ 0.2
CMTM3-212ENST00000566121 RALGPS2Q86X27 583 aaPredicted RBP16.31■□□□□ 0.2
CMTM3-212ENST00000566121 ADSSL1Q8N142 457 aa16.31■□□□□ 0.2
CMTM3-212ENST00000566121 KIAA1958Q8N8K9 716 aa16.31■□□□□ 0.2
CMTM3-212ENST00000566121 ZSWIM2Q8NEG5 633 aa16.31■□□□□ 0.2
CMTM3-212ENST00000566121 PDE11AQ9HCR9 933 aa16.31■□□□□ 0.2
CMTM3-212ENST00000566121 ZSCAN32Q9NX65 697 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms