RNA–Protein interactions for RNA: ENST00000565453.1

CDH3-204, Transcript of cadherin 3, humanhuman

TSL 4

Gene CDH3, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-204ENST00000565453 HSP90AA1P07900 732 aaKnown RBP16.86■□□□□ 0.29
CDH3-204ENST00000565453 CASP1P29466 404 aa16.86■□□□□ 0.29
CDH3-204ENST00000565453 GDI1P31150 447 aa16.86■□□□□ 0.29
CDH3-204ENST00000565453 RBP5P82980 135 aa16.86■□□□□ 0.29
CDH3-204ENST00000565453 DNM1Q05193 864 aaKnown RBP16.86■□□□□ 0.29
CDH3-204ENST00000565453 BFSP1Q12934 665 aa16.86■□□□□ 0.29
CDH3-204ENST00000565453 MGAT5BQ3V5L5 792 aa16.86■□□□□ 0.29
CDH3-204ENST00000565453 LMBRD2Q68DH5 695 aaPredicted RBP16.86■□□□□ 0.29
CDH3-204ENST00000565453 OSTM1Q86WC4 334 aa16.86■□□□□ 0.29
CDH3-204ENST00000565453 MFSD6LQ8IWD5 586 aa16.86■□□□□ 0.29
CDH3-204ENST00000565453 DCP1BQ8IZD4 617 aaKnown RBP16.86■□□□□ 0.29
CDH3-204ENST00000565453 CSGALNACT2Q8N6G5 542 aa16.86■□□□□ 0.29
CDH3-204ENST00000565453 OR5B17Q8NGF7 314 aa16.86■□□□□ 0.29
CDH3-204ENST00000565453 NOC3LQ8WTT2 800 aaKnown RBP16.86■□□□□ 0.29
CDH3-204ENST00000565453 SCFD1Q8WVM8 642 aa16.86■□□□□ 0.29
CDH3-204ENST00000565453 IRF7Q92985 503 aa16.86■□□□□ 0.29
CDH3-204ENST00000565453 NKD2Q969F2 451 aaPredicted RBP16.86■□□□□ 0.29
CDH3-204ENST00000565453 E2F7Q96AV8 911 aa16.86■□□□□ 0.29
CDH3-204ENST00000565453 CLDN23Q96B33 292 aa16.86■□□□□ 0.29
CDH3-204ENST00000565453 PKMYT1Q99640 499 aa16.86■□□□□ 0.29
CDH3-204ENST00000565453 RCOR1Q9UKL0 485 aa16.86■□□□□ 0.29
CDH3-204ENST00000565453 PATJQ8NI35 1801 aa16.85■□□□□ 0.29
CDH3-204ENST00000565453 ZNF233A6NK53 670 aa16.85■□□□□ 0.29
CDH3-204ENST00000565453 FGF19O95750 216 aa16.85■□□□□ 0.29
CDH3-204ENST00000565453 TMEM191BP0C7N4 346 aa16.85■□□□□ 0.29
CDH3-204ENST00000565453 SP9P0CG40 484 aa16.85■□□□□ 0.29
CDH3-204ENST00000565453 GABRR2P28476 465 aa16.85■□□□□ 0.29
CDH3-204ENST00000565453 ZNF852Q6ZMS4 543 aa16.85■□□□□ 0.29
CDH3-204ENST00000565453 LIMS2Q7Z4I7 341 aa16.85■□□□□ 0.29
CDH3-204ENST00000565453 TMEM86AQ8N2M4 240 aa16.85■□□□□ 0.29
CDH3-204ENST00000565453 SPRYD3Q8NCJ5 442 aa16.85■□□□□ 0.29
CDH3-204ENST00000565453 SPATA18Q8TC71 538 aa16.85■□□□□ 0.29
CDH3-204ENST00000565453 LEO1Q8WVC0 666 aaPredicted RBP16.85■□□□□ 0.29
CDH3-204ENST00000565453 NELL2Q99435 816 aa16.85■□□□□ 0.29
CDH3-204ENST00000565453 ACBD6Q9BR61 282 aa16.85■□□□□ 0.29
CDH3-204ENST00000565453 BCO2Q9BYV7 579 aa16.85■□□□□ 0.29
CDH3-204ENST00000565453 BLZF1Q9H2G9 400 aa16.85■□□□□ 0.29
CDH3-204ENST00000565453 ATXN3LQ9H3M9 355 aa16.85■□□□□ 0.29
CDH3-204ENST00000565453 SLITRK6Q9H5Y7 841 aa16.85■□□□□ 0.29
CDH3-204ENST00000565453 AGPAT3Q9NRZ7 376 aa16.85■□□□□ 0.29
CDH3-204ENST00000565453 ABI2Q9NYB9 513 aaPredicted RBP16.85■□□□□ 0.29
CDH3-204ENST00000565453 FAM13BQ9NYF5 915 aa16.85■□□□□ 0.29
CDH3-204ENST00000565453 UBE4BO95155 1302 aa16.85■□□□□ 0.29
CDH3-204ENST00000565453 NUP210Q8TEM1 1887 aaPredicted RBP16.84■□□□□ 0.29
CDH3-204ENST00000565453 GABRDO14764 452 aa16.84■□□□□ 0.29
CDH3-204ENST00000565453 HUS1O60921 280 aa16.84■□□□□ 0.29
CDH3-204ENST00000565453 KRT19P08727 400 aa16.84■□□□□ 0.29
CDH3-204ENST00000565453 HMGA1P17096 107 aaKnown RBP16.84■□□□□ 0.29
CDH3-204ENST00000565453 WEE1P30291 646 aa16.84■□□□□ 0.29
CDH3-204ENST00000565453 MAGEA9P43362 315 aa16.84■□□□□ 0.29
CDH3-204ENST00000565453 ME1P48163 572 aa16.84■□□□□ 0.29
CDH3-204ENST00000565453 FCHO2Q0JRZ9 810 aa16.84■□□□□ 0.29
CDH3-204ENST00000565453 VEPH1Q14D04 833 aa16.84■□□□□ 0.29
CDH3-204ENST00000565453 SURF1Q15526 300 aa16.84■□□□□ 0.29
CDH3-204ENST00000565453 BMT2Q1RMZ1 405 aa16.84■□□□□ 0.29
CDH3-204ENST00000565453 INTS6LQ5JSJ4 861 aaKnown RBP16.84■□□□□ 0.29
CDH3-204ENST00000565453 ARID3BQ8IVW6 561 aaPredicted RBP16.84■□□□□ 0.29
CDH3-204ENST00000565453 TOP6BLQ8N6T0 577 aa16.84■□□□□ 0.29
CDH3-204ENST00000565453 FAM200AQ8TCP9 573 aa16.84■□□□□ 0.29
CDH3-204ENST00000565453 GIPC2Q8TF65 315 aa16.84■□□□□ 0.29
CDH3-204ENST00000565453 ANKRD36BP1Q96IX9 119 aa16.84■□□□□ 0.29
CDH3-204ENST00000565453 LRRC3BQ96PB8 259 aa16.84■□□□□ 0.29
CDH3-204ENST00000565453 KIAA1586Q9HCI6 787 aa16.84■□□□□ 0.29
CDH3-204ENST00000565453 DDX43Q9NXZ2 648 aaKnown RBP16.84■□□□□ 0.29
CDH3-204ENST00000565453 CFAP45Q9UL16 551 aa16.84■□□□□ 0.29
CDH3-204ENST00000565453 PCDHB5Q9Y5E4 795 aa16.84■□□□□ 0.29
CDH3-204ENST00000565453 SNX9Q9Y5X1 595 aa16.84■□□□□ 0.29
CDH3-204ENST00000565453 USP34Q70CQ2 3546 aa16.84■□□□□ 0.29
CDH3-204ENST00000565453 TICRRQ7Z2Z1 1910 aa16.84■□□□□ 0.29
CDH3-204ENST00000565453 MYO15AQ9UKN7 3530 aa16.83■□□□□ 0.29
CDH3-204ENST00000565453 PVALEFA0A1B0GWK0 134 aa16.83■□□□□ 0.28
CDH3-204ENST00000565453 TULP1O00294 542 aaPredicted RBP16.83■□□□□ 0.28
CDH3-204ENST00000565453 ZNF263O14978 683 aa16.83■□□□□ 0.28
CDH3-204ENST00000565453 HCRTO43612 131 aa16.83■□□□□ 0.28
CDH3-204ENST00000565453 RPS9P46781 194 aaKnown RBP16.83■□□□□ 0.28
CDH3-204ENST00000565453 GPR15P49685 360 aa16.83■□□□□ 0.28
CDH3-204ENST00000565453 SNRPFP62306 86 aaKnown RBP16.83■□□□□ 0.28
CDH3-204ENST00000565453 CYP4F8P98187 520 aa16.83■□□□□ 0.28
CDH3-204ENST00000565453 TSPY1Q01534 308 aa16.83■□□□□ 0.28
CDH3-204ENST00000565453 CUL4BQ13620 913 aa16.83■□□□□ 0.28
CDH3-204ENST00000565453 NFE2Q16621 373 aaPredicted RBP16.83■□□□□ 0.28
CDH3-204ENST00000565453 SOWAHAQ2M3V2 549 aa16.83■□□□□ 0.28
CDH3-204ENST00000565453 GPR158Q5T848 1215 aa16.83■□□□□ 0.28
CDH3-204ENST00000565453 TMEM150AQ86TG1 271 aa16.83■□□□□ 0.28
CDH3-204ENST00000565453 WDR49Q8IV35 697 aa16.83■□□□□ 0.28
CDH3-204ENST00000565453 NELFCDQ8IXH7 590 aa16.83■□□□□ 0.28
CDH3-204ENST00000565453 ZFHX2Q9C0A1 2572 aaPredicted RBP16.83■□□□□ 0.28
CDH3-204ENST00000565453 TASP1Q9H6P5 420 aa16.83■□□□□ 0.28
CDH3-204ENST00000565453 OBP2AQ9NY56 170 aa16.83■□□□□ 0.28
CDH3-204ENST00000565453 R4GN57 208 aa16.83■□□□□ 0.28
CDH3-204ENST00000565453 MAN2B1O00754 1011 aa16.82■□□□□ 0.28
CDH3-204ENST00000565453 CLIC2O15247 247 aa16.82■□□□□ 0.28
CDH3-204ENST00000565453 CHADO15335 359 aa16.82■□□□□ 0.28
CDH3-204ENST00000565453 ACTN4O43707 911 aaKnown RBP16.82■□□□□ 0.28
CDH3-204ENST00000565453 KLRC4O43908 158 aa16.82■□□□□ 0.28
CDH3-204ENST00000565453 F11P03951 625 aa16.82■□□□□ 0.28
CDH3-204ENST00000565453 ACAT1P24752 427 aaKnown RBP16.82■□□□□ 0.28
CDH3-204ENST00000565453 CDC25CP30307 473 aa16.82■□□□□ 0.28
CDH3-204ENST00000565453 AFMP43652 599 aa16.82■□□□□ 0.28
CDH3-204ENST00000565453 MLLT6P55198 1093 aaPredicted RBP16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms