RNA–Protein interactions for RNA: ENST00000564846.1

CLN6-205, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 1,762 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-205ENST00000564846 DNAI2Q9GZS0 605 aa20.75■□□□□ 0.91
CLN6-205ENST00000564846 GOLGA2P5Q9HBQ8 144 aa20.75■□□□□ 0.91
CLN6-205ENST00000564846 ARL5CA6NH57 179 aa20.74■□□□□ 0.91
CLN6-205ENST00000564846 SPTLC1O15269 473 aa20.74■□□□□ 0.91
CLN6-205ENST00000564846 CEP104O60308 925 aa20.74■□□□□ 0.91
CLN6-205ENST00000564846 MICAL2O94851 1124 aa20.74■□□□□ 0.91
CLN6-205ENST00000564846 TUBBP07437 444 aa20.74■□□□□ 0.91
CLN6-205ENST00000564846 C2orf54Q08AI8 447 aa20.74■□□□□ 0.91
CLN6-205ENST00000564846 TRAF7Q6Q0C0 670 aa20.74■□□□□ 0.91
CLN6-205ENST00000564846 AGMOQ6ZNB7 445 aa20.74■□□□□ 0.91
CLN6-205ENST00000564846 DPH6Q7L8W6 267 aa20.74■□□□□ 0.91
CLN6-205ENST00000564846 RASGEF1CQ8N431 466 aa20.74■□□□□ 0.91
CLN6-205ENST00000564846 LPPQ93052 612 aa20.74■□□□□ 0.91
CLN6-205ENST00000564846 BTBD6Q96KE9 485 aa20.74■□□□□ 0.91
CLN6-205ENST00000564846 ADAM2Q99965 735 aa20.74■□□□□ 0.91
CLN6-205ENST00000564846 TSPYL2Q9H2G4 693 aaPredicted RBP20.74■□□□□ 0.91
CLN6-205ENST00000564846 ANKZF1Q9H8Y5 726 aa20.74■□□□□ 0.91
CLN6-205ENST00000564846 ARGLU1Q9NWB6 273 aaPredicted RBP20.74■□□□□ 0.91
CLN6-205ENST00000564846 SMARCAL1Q9NZC9 954 aa20.74■□□□□ 0.91
CLN6-205ENST00000564846 EHD2Q9NZN4 543 aa20.74■□□□□ 0.91
CLN6-205ENST00000564846 LCMT1Q9UIC8 334 aa20.74■□□□□ 0.91
CLN6-205ENST00000564846 CCDC66A2RUB6 948 aa20.74■□□□□ 0.91
CLN6-205ENST00000564846 SPOPO43791 374 aa20.74■□□□□ 0.91
CLN6-205ENST00000564846 CDK7P50613 346 aa20.74■□□□□ 0.91
CLN6-205ENST00000564846 LILRA4P59901 499 aa20.74■□□□□ 0.91
CLN6-205ENST00000564846 TAP1Q03518 808 aa20.74■□□□□ 0.91
CLN6-205ENST00000564846 LCLAT1Q6UWP7 414 aa20.74■□□□□ 0.91
CLN6-205ENST00000564846 LIMS2Q7Z4I7 341 aa20.74■□□□□ 0.91
CLN6-205ENST00000564846 PHLDB2Q86SQ0 1253 aa20.74■□□□□ 0.91
CLN6-205ENST00000564846 APPL2Q8NEU8 664 aa20.74■□□□□ 0.91
CLN6-205ENST00000564846 OR6B3Q8NGW1 331 aa20.74■□□□□ 0.91
CLN6-205ENST00000564846 CD101Q93033 1021 aa20.74■□□□□ 0.91
CLN6-205ENST00000564846 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.74■□□□□ 0.91
CLN6-205ENST00000564846 EPC1Q9H2F5 836 aa20.74■□□□□ 0.91
CLN6-205ENST00000564846 TTC7AQ9ULT0 858 aaPredicted RBP20.74■□□□□ 0.91
CLN6-205ENST00000564846 SCN1AP35498 2009 aa20.74■□□□□ 0.91
CLN6-205ENST00000564846 PGRMC1O00264 195 aaKnown RBP20.73■□□□□ 0.91
CLN6-205ENST00000564846 FAM163BP0C2L3 166 aa20.73■□□□□ 0.91
CLN6-205ENST00000564846 H2AFXP16104 143 aaPredicted RBP20.73■□□□□ 0.91
CLN6-205ENST00000564846 CTNNA2P26232 953 aa20.73■□□□□ 0.91
CLN6-205ENST00000564846 CLUL1Q15846 466 aa20.73■□□□□ 0.91
CLN6-205ENST00000564846 CCDC70Q6NSX1 233 aa20.73■□□□□ 0.91
CLN6-205ENST00000564846 TOP6BLQ8N6T0 577 aa20.73■□□□□ 0.91
CLN6-205ENST00000564846 FEZF2Q8TBJ5 459 aa20.73■□□□□ 0.91
CLN6-205ENST00000564846 PARD6BQ9BYG5 372 aa20.73■□□□□ 0.91
CLN6-205ENST00000564846 RSAD1Q9HA92 442 aa20.73■□□□□ 0.91
CLN6-205ENST00000564846 A8MXQ7 604 aa20.72■□□□□ 0.91
CLN6-205ENST00000564846 M0QYV0 167 aa20.72■□□□□ 0.91
CLN6-205ENST00000564846 HUS1O60921 280 aa20.72■□□□□ 0.91
CLN6-205ENST00000564846 RHOXF2BP0C7M4 288 aa20.72■□□□□ 0.91
CLN6-205ENST00000564846 CTNNA1P35221 906 aaKnown RBP20.72■□□□□ 0.91
CLN6-205ENST00000564846 LLGL2Q6P1M3 1020 aa20.72■□□□□ 0.91
CLN6-205ENST00000564846 DNAJC24Q6P3W2 148 aa20.72■□□□□ 0.91
CLN6-205ENST00000564846 RHOXF2Q9BQY4 288 aa20.72■□□□□ 0.91
CLN6-205ENST00000564846 SNX25Q9H3E2 840 aa20.72■□□□□ 0.91
CLN6-205ENST00000564846 WDR35Q9P2L0 1181 aa20.72■□□□□ 0.91
CLN6-205ENST00000564846 PCDHA3Q9Y5H8 950 aa20.72■□□□□ 0.91
CLN6-205ENST00000564846 TCRBV5S1A1TA0A578 114 aa20.72■□□□□ 0.91
CLN6-205ENST00000564846 PROSCO94903 275 aa20.72■□□□□ 0.91
CLN6-205ENST00000564846 RPL9P32969 192 aaKnown RBP20.72■□□□□ 0.91
CLN6-205ENST00000564846 GNL1P36915 607 aaPredicted RBP20.72■□□□□ 0.91
CLN6-205ENST00000564846 GPD2P43304 727 aa20.72■□□□□ 0.91
CLN6-205ENST00000564846 GSCP56915 257 aaPredicted RBP20.72■□□□□ 0.91
CLN6-205ENST00000564846 PTPN20Q4JDL3 420 aa20.72■□□□□ 0.91
CLN6-205ENST00000564846 FBXO38Q6PIJ6 1188 aa20.72■□□□□ 0.91
CLN6-205ENST00000564846 C3orf20Q8ND61 904 aa20.72■□□□□ 0.91
CLN6-205ENST00000564846 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.72■□□□□ 0.91
CLN6-205ENST00000564846 KBTBD7Q8WVZ9 684 aa20.72■□□□□ 0.91
CLN6-205ENST00000564846 ALG3Q92685 438 aa20.72■□□□□ 0.91
CLN6-205ENST00000564846 C18orf8Q96DM3 657 aa20.72■□□□□ 0.91
CLN6-205ENST00000564846 DEFB118Q96PH6 123 aa20.72■□□□□ 0.91
CLN6-205ENST00000564846 RGS18Q9NS28 235 aa20.72■□□□□ 0.91
CLN6-205ENST00000564846 MIOSQ9NXC5 875 aa20.72■□□□□ 0.91
CLN6-205ENST00000564846 TSPAN16Q9UKR8 245 aa20.72■□□□□ 0.91
CLN6-205ENST00000564846 OGDHLQ9ULD0 1010 aa20.72■□□□□ 0.91
CLN6-205ENST00000564846 TARSL2A2RTX5 802 aaKnown RBP20.71■□□□□ 0.91
CLN6-205ENST00000564846 PEX5P50542 639 aa20.71■□□□□ 0.91
CLN6-205ENST00000564846 SCNN1GP51170 649 aa20.71■□□□□ 0.91
CLN6-205ENST00000564846 RBM10P98175 930 aaKnown RBP20.71■□□□□ 0.91
CLN6-205ENST00000564846 DCAF12L1Q5VU92 463 aa20.71■□□□□ 0.91
CLN6-205ENST00000564846 ACOT1Q86TX2 421 aa20.71■□□□□ 0.91
CLN6-205ENST00000564846 FAM126BQ8IXS8 530 aa20.71■□□□□ 0.91
CLN6-205ENST00000564846 CRYBG2Q8N1P7 616 aa20.71■□□□□ 0.91
CLN6-205ENST00000564846 RNF169Q8NCN4 708 aa20.71■□□□□ 0.91
CLN6-205ENST00000564846 NAP1L3Q99457 506 aaPredicted RBP20.71■□□□□ 0.91
CLN6-205ENST00000564846 TRIM7Q9C029 511 aa20.71■□□□□ 0.91
CLN6-205ENST00000564846 RBM12Q9NTZ6 932 aaKnown RBP20.71■□□□□ 0.91
CLN6-205ENST00000564846 CYTH4Q9UIA0 394 aa20.71■□□□□ 0.91
CLN6-205ENST00000564846 TMEM59LQ9UK28 342 aa20.71■□□□□ 0.91
CLN6-205ENST00000564846 L1RE1Q9UN81 338 aa20.71■□□□□ 0.91
CLN6-205ENST00000564846 TMEM191CA6NGB0 347 aa20.7■□□□□ 0.9
CLN6-205ENST00000564846 CCL5P13501 91 aa20.7■□□□□ 0.9
CLN6-205ENST00000564846 SELPP16109 830 aa20.7■□□□□ 0.9
CLN6-205ENST00000564846 MAN1A1P33908 653 aa20.7■□□□□ 0.9
CLN6-205ENST00000564846 AFF1P51825 1210 aaKnown RBP20.7■□□□□ 0.9
CLN6-205ENST00000564846 RNASE9P60153 205 aaKnown RBP20.7■□□□□ 0.9
CLN6-205ENST00000564846 PDCLQ13371 301 aa20.7■□□□□ 0.9
CLN6-205ENST00000564846 BFSP2Q13515 415 aa20.7■□□□□ 0.9
CLN6-205ENST00000564846 MBTPS1Q14703 1052 aa20.7■□□□□ 0.9
CLN6-205ENST00000564846 ARHGAP17Q68EM7 881 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms