RNA–Protein interactions for RNA: ENST00000564841.1

LINC00554-201, long intergenic non-protein coding RNA 554, humanhuman

BASIC

Gene LINC00554, Length 3,011 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00554-201ENST00000564841 PSMC2P35998 433 aaKnown RBP17.15■□□□□ 0.34
LINC00554-201ENST00000564841 LPCAT4Q643R3 524 aa17.15■□□□□ 0.34
LINC00554-201ENST00000564841 NOP9Q86U38 636 aaKnown RBP17.15■□□□□ 0.34
LINC00554-201ENST00000564841 SLC47A2Q86VL8 602 aa17.15■□□□□ 0.34
LINC00554-201ENST00000564841 SESTD1Q86VW0 696 aa17.15■□□□□ 0.34
LINC00554-201ENST00000564841 ZSWIM2Q8NEG5 633 aa17.15■□□□□ 0.34
LINC00554-201ENST00000564841 ZNF653Q96CK0 615 aa17.15■□□□□ 0.34
LINC00554-201ENST00000564841 PANX3Q96QZ0 392 aa17.15■□□□□ 0.34
LINC00554-201ENST00000564841 ZNF212Q9UDV6 495 aa17.15■□□□□ 0.34
LINC00554-201ENST00000564841 KDM3AQ9Y4C1 1321 aa17.14■□□□□ 0.34
LINC00554-201ENST00000564841 SPDYE16A6NNV3 312 aaPredicted RBP17.14■□□□□ 0.33
LINC00554-201ENST00000564841 ZNF862O60290 1169 aa17.14■□□□□ 0.33
LINC00554-201ENST00000564841 ASLP04424 464 aa17.14■□□□□ 0.33
LINC00554-201ENST00000564841 ITGA2BP08514 1039 aa17.14■□□□□ 0.33
LINC00554-201ENST00000564841 MAGEA8P43361 318 aa17.14■□□□□ 0.33
LINC00554-201ENST00000564841 HYIQ5T013 277 aa17.14■□□□□ 0.33
LINC00554-201ENST00000564841 DLK2Q6UY11 383 aa17.14■□□□□ 0.33
LINC00554-201ENST00000564841 RIPOR1Q6ZS17 1223 aa17.14■□□□□ 0.33
LINC00554-201ENST00000564841 MICALL2Q8IY33 904 aa17.14■□□□□ 0.33
LINC00554-201ENST00000564841 SYT2Q8N9I0 419 aaPredicted RBP17.14■□□□□ 0.33
LINC00554-201ENST00000564841 CENPKQ9BS16 269 aa17.14■□□□□ 0.33
LINC00554-201ENST00000564841 TMEM120AQ9BXJ8 343 aa17.14■□□□□ 0.33
LINC00554-201ENST00000564841 CYP26A1O43174 497 aa17.14■□□□□ 0.33
LINC00554-201ENST00000564841 ENO1P06733 434 aaKnown RBP17.14■□□□□ 0.33
LINC00554-201ENST00000564841 GMPSP49915 693 aaPredicted RBP17.14■□□□□ 0.33
LINC00554-201ENST00000564841 MYL7Q01449 175 aa17.14■□□□□ 0.33
LINC00554-201ENST00000564841 KDSRQ06136 332 aa17.14■□□□□ 0.33
LINC00554-201ENST00000564841 SPIRE1Q08AE8 756 aa17.14■□□□□ 0.33
LINC00554-201ENST00000564841 ZRSR2Q15696 482 aaKnown RBP17.14■□□□□ 0.33
LINC00554-201ENST00000564841 DBN1Q16643 649 aa17.14■□□□□ 0.33
LINC00554-201ENST00000564841 FYB2Q5VWT5 728 aa17.14■□□□□ 0.33
LINC00554-201ENST00000564841 DUS1LQ6P1R4 473 aaKnown RBP17.14■□□□□ 0.33
LINC00554-201ENST00000564841 ANKS1BQ7Z6G8 1248 aa17.14■□□□□ 0.33
LINC00554-201ENST00000564841 ANKMY2Q8IV38 441 aa17.14■□□□□ 0.33
LINC00554-201ENST00000564841 EIF2AK1Q9BQI3 630 aaKnown RBP17.14■□□□□ 0.33
LINC00554-201ENST00000564841 NMUR2Q9GZQ4 415 aa17.14■□□□□ 0.33
LINC00554-201ENST00000564841 KCNK13Q9HB14 408 aa17.14■□□□□ 0.33
LINC00554-201ENST00000564841 ARHGEF4Q9NR80 690 aa17.14■□□□□ 0.33
LINC00554-201ENST00000564841 ANKFY1Q9P2R3 1169 aa17.14■□□□□ 0.33
LINC00554-201ENST00000564841 ATP8B3O60423 1300 aa17.14■□□□□ 0.33
LINC00554-201ENST00000564841 FSCN2O14926 492 aa17.13■□□□□ 0.33
LINC00554-201ENST00000564841 TYROBPO43914 113 aa17.13■□□□□ 0.33
LINC00554-201ENST00000564841 ARFIP2P53365 341 aa17.13■□□□□ 0.33
LINC00554-201ENST00000564841 PTK6Q13882 451 aa17.13■□□□□ 0.33
LINC00554-201ENST00000564841 KIF22Q14807 665 aa17.13■□□□□ 0.33
LINC00554-201ENST00000564841 CLUL1Q15846 466 aa17.13■□□□□ 0.33
LINC00554-201ENST00000564841 C12orf50Q8NA57 414 aaPredicted RBP17.13■□□□□ 0.33
LINC00554-201ENST00000564841 CNKSR2Q8WXI2 1034 aa17.13■□□□□ 0.33
LINC00554-201ENST00000564841 THTPAQ9BU02 230 aa17.13■□□□□ 0.33
LINC00554-201ENST00000564841 DCLK3Q9C098 648 aa17.13■□□□□ 0.33
LINC00554-201ENST00000564841 COMMD3-BMI1R4GMX3 469 aa17.13■□□□□ 0.33
LINC00554-201ENST00000564841 SORBS2O94875 1100 aaKnown RBP17.13■□□□□ 0.33
LINC00554-201ENST00000564841 TREML1Q86YW5 311 aa17.13■□□□□ 0.33
LINC00554-201ENST00000564841 NLGN2Q8NFZ4 835 aa17.13■□□□□ 0.33
LINC00554-201ENST00000564841 ETNPPLQ8TBG4 499 aa17.13■□□□□ 0.33
LINC00554-201ENST00000564841 NR1H4Q96RI1 486 aaPredicted RBP17.13■□□□□ 0.33
LINC00554-201ENST00000564841 FHDC1Q9C0D6 1143 aaPredicted RBP17.13■□□□□ 0.33
LINC00554-201ENST00000564841 KLHL11Q9NVR0 708 aa17.13■□□□□ 0.33
LINC00554-201ENST00000564841 DDX43Q9NXZ2 648 aaKnown RBP17.13■□□□□ 0.33
LINC00554-201ENST00000564841 TMCO1Q9UM00 188 aa17.13■□□□□ 0.33
LINC00554-201ENST00000564841 ACTL7BQ9Y614 415 aa17.13■□□□□ 0.33
LINC00554-201ENST00000564841 SIPA1L1O43166 1804 aa17.13■□□□□ 0.33
LINC00554-201ENST00000564841 FAM237BA0A1B0GVD1 139 aa17.13■□□□□ 0.33
LINC00554-201ENST00000564841 TMEM150BA6NC51 233 aa17.13■□□□□ 0.33
LINC00554-201ENST00000564841 FAM13AO94988 1023 aa17.13■□□□□ 0.33
LINC00554-201ENST00000564841 ORC2Q13416 577 aaPredicted RBP17.13■□□□□ 0.33
LINC00554-201ENST00000564841 SFT2D3Q587I9 215 aa17.13■□□□□ 0.33
LINC00554-201ENST00000564841 TCP10LQ8TDR4 215 aa17.13■□□□□ 0.33
LINC00554-201ENST00000564841 SLC16A10Q8TF71 515 aa17.13■□□□□ 0.33
LINC00554-201ENST00000564841 PYDC1Q8WXC3 89 aa17.13■□□□□ 0.33
LINC00554-201ENST00000564841 USP6NLQ92738 828 aa17.13■□□□□ 0.33
LINC00554-201ENST00000564841 LENG9Q96B70 501 aa17.13■□□□□ 0.33
LINC00554-201ENST00000564841 GMCL1Q96IK5 515 aa17.13■□□□□ 0.33
LINC00554-201ENST00000564841 RPL26L1Q9UNX3 145 aaKnown RBP17.13■□□□□ 0.33
LINC00554-201ENST00000564841 RABGAP1Q9Y3P9 1069 aa17.13■□□□□ 0.33
LINC00554-201ENST00000564841 GTPBP10A4D1E9 387 aaKnown RBP17.12■□□□□ 0.33
LINC00554-201ENST00000564841 E5RJQ4 531 aa17.12■□□□□ 0.33
LINC00554-201ENST00000564841 TROVE2P10155 538 aaKnown RBP eCLIP17.12■□□□□ 0.33
LINC00554-201ENST00000564841 RALAP11233 206 aa17.12■□□□□ 0.33
LINC00554-201ENST00000564841 CAP2P40123 477 aa17.12■□□□□ 0.33
LINC00554-201ENST00000564841 GCLMP48507 274 aa17.12■□□□□ 0.33
LINC00554-201ENST00000564841 GAD2Q05329 585 aa17.12■□□□□ 0.33
LINC00554-201ENST00000564841 DPY19L2Q6NUT2 758 aa17.12■□□□□ 0.33
LINC00554-201ENST00000564841 PPP1R18Q6NYC8 613 aa17.12■□□□□ 0.33
LINC00554-201ENST00000564841 GSTA5Q7RTV2 222 aa17.12■□□□□ 0.33
LINC00554-201ENST00000564841 TRIM42Q8IWZ5 723 aa17.12■□□□□ 0.33
LINC00554-201ENST00000564841 GMCL1P1Q8NEA9 526 aa17.12■□□□□ 0.33
LINC00554-201ENST00000564841 ATRNL1Q5VV63 1379 aa17.12■□□□□ 0.33
LINC00554-201ENST00000564841 CCDC160A6NGH7 325 aa17.12■□□□□ 0.33
LINC00554-201ENST00000564841 PRPF4O43172 522 aaKnown RBP eCLIP17.12■□□□□ 0.33
LINC00554-201ENST00000564841 GAS8O95995 478 aa17.12■□□□□ 0.33
LINC00554-201ENST00000564841 HIRAP54198 1017 aaPredicted RBP17.12■□□□□ 0.33
LINC00554-201ENST00000564841 ARL4CP56559 192 aa17.12■□□□□ 0.33
LINC00554-201ENST00000564841 DLG1Q12959 904 aa17.12■□□□□ 0.33
LINC00554-201ENST00000564841 GSTA3Q16772 222 aa17.12■□□□□ 0.33
LINC00554-201ENST00000564841 ZNF276Q8N554 614 aa17.12■□□□□ 0.33
LINC00554-201ENST00000564841 RBM15BQ8NDT2 890 aaKnown RBP17.12■□□□□ 0.33
LINC00554-201ENST00000564841 HIPK4Q8NE63 616 aa17.12■□□□□ 0.33
LINC00554-201ENST00000564841 ZNF395Q9H8N7 513 aaPredicted RBP17.12■□□□□ 0.33
LINC00554-201ENST00000564841 WRAP73Q9P2S5 460 aaPredicted RBP17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms