RNA–Protein interactions for RNA: ENST00000564791.5

SNX29-204, Transcript of sorting nexin 29, humanhuman

TSL 1 (best)

Gene SNX29, Length 1,633 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-204ENST00000564791 PRDM5Q9NQX1 630 aaPredicted RBP11.96□□□□□ -0.5
SNX29-204ENST00000564791 TBC1D13Q9NVG8 400 aa11.96□□□□□ -0.5
SNX29-204ENST00000564791 GTF3C4Q9UKN8 822 aa11.96□□□□□ -0.5
SNX29-204ENST00000564791 LRFN2Q9ULH4 789 aa11.96□□□□□ -0.5
SNX29-204ENST00000564791 PCDHB7Q9Y5E2 793 aa11.96□□□□□ -0.5
SNX29-204ENST00000564791 PCDHGC5Q9Y5F6 944 aa11.96□□□□□ -0.5
SNX29-204ENST00000564791 ENC1O14682 589 aa11.95□□□□□ -0.5
SNX29-204ENST00000564791 DDHD2O94830 711 aa11.95□□□□□ -0.5
SNX29-204ENST00000564791 MICAL2O94851 1124 aa11.95□□□□□ -0.5
SNX29-204ENST00000564791 CYP1A2P05177 515 aa11.95□□□□□ -0.5
SNX29-204ENST00000564791 PDGFRBP09619 1106 aa11.95□□□□□ -0.5
SNX29-204ENST00000564791 CDH5P33151 784 aaPredicted RBP11.95□□□□□ -0.5
SNX29-204ENST00000564791 RFC2P35250 354 aa11.95□□□□□ -0.5
SNX29-204ENST00000564791 GNL1P36915 607 aaPredicted RBP11.95□□□□□ -0.5
SNX29-204ENST00000564791 AARSP49588 968 aaKnown RBP eCLIP11.95□□□□□ -0.53e-6■■■■■ 61.8
SNX29-204ENST00000564791 GATMP50440 423 aa11.95□□□□□ -0.5
SNX29-204ENST00000564791 DSC1Q08554 894 aa11.95□□□□□ -0.5
SNX29-204ENST00000564791 PAN2Q504Q3 1202 aaKnown RBP11.95□□□□□ -0.5
SNX29-204ENST00000564791 WSCD1Q658N2 575 aa11.95□□□□□ -0.5
SNX29-204ENST00000564791 CNKSR3Q6P9H4 555 aa11.95□□□□□ -0.5
SNX29-204ENST00000564791 CD300LGQ6UXG3 332 aa11.95□□□□□ -0.5
SNX29-204ENST00000564791 DSTYKQ6XUX3 929 aa11.95□□□□□ -0.5
SNX29-204ENST00000564791 DPH6Q7L8W6 267 aa11.95□□□□□ -0.5
SNX29-204ENST00000564791 PHF13Q86YI8 300 aaPredicted RBP11.95□□□□□ -0.5
SNX29-204ENST00000564791 RHOT2Q8IXI1 618 aa11.95□□□□□ -0.5
SNX29-204ENST00000564791 C12orf29Q8N999 325 aa11.95□□□□□ -0.5
SNX29-204ENST00000564791 TMEM35BQ8NCS4 154 aa11.95□□□□□ -0.5
SNX29-204ENST00000564791 TPCN2Q8NHX9 752 aa11.95□□□□□ -0.5
SNX29-204ENST00000564791 LPIN3Q9BQK8 851 aa11.95□□□□□ -0.5
SNX29-204ENST00000564791 C11orf70Q9BRQ4 267 aa11.95□□□□□ -0.5
SNX29-204ENST00000564791 CNOT8Q9UFF9 292 aaKnown RBP11.95□□□□□ -0.5
SNX29-204ENST00000564791 CHORDC1Q9UHD1 332 aaPredicted RBP11.95□□□□□ -0.5
SNX29-204ENST00000564791 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.95□□□□□ -0.5
SNX29-204ENST00000564791 COG5Q9UP83 839 aa11.95□□□□□ -0.5
SNX29-204ENST00000564791 CEP83Q9Y592 693 aa11.95□□□□□ -0.5
SNX29-204ENST00000564791 F8W810 466 aa11.94□□□□□ -0.5
SNX29-204ENST00000564791 M0QYV0 167 aa11.94□□□□□ -0.5
SNX29-204ENST00000564791 KIAA0355O15063 1070 aa11.94□□□□□ -0.5
SNX29-204ENST00000564791 URI1O94763 535 aaPredicted RBP11.94□□□□□ -0.5
SNX29-204ENST00000564791 B3GAT3O94766 335 aa11.94□□□□□ -0.5
SNX29-204ENST00000564791 KIF4AO95239 1232 aa11.94□□□□□ -0.5
SNX29-204ENST00000564791 TIMP1P01033 207 aa11.94□□□□□ -0.5
SNX29-204ENST00000564791 ATP1A1P05023 1023 aaKnown RBP11.94□□□□□ -0.5
SNX29-204ENST00000564791 EN2P19622 333 aaPredicted RBP11.94□□□□□ -0.5
SNX29-204ENST00000564791 LMO2P25791 158 aa11.94□□□□□ -0.5
SNX29-204ENST00000564791 ITGB8P26012 769 aa11.94□□□□□ -0.5
SNX29-204ENST00000564791 BRCC3P46736 316 aa11.94□□□□□ -0.5
SNX29-204ENST00000564791 RNASELQ05823 741 aaKnown RBP11.94□□□□□ -0.5
SNX29-204ENST00000564791 PTP4A2Q12974 167 aa11.94□□□□□ -0.5
SNX29-204ENST00000564791 TCEAL1Q15170 157 aa11.94□□□□□ -0.5
SNX29-204ENST00000564791 CNGA2Q16280 664 aa11.94□□□□□ -0.5
SNX29-204ENST00000564791 IFI16Q16666 785 aaKnown RBP11.94□□□□□ -0.5
SNX29-204ENST00000564791 GOLGA7BQ2TAP0 167 aa11.94□□□□□ -0.5
SNX29-204ENST00000564791 TIGD5Q53EQ6 642 aa11.94□□□□□ -0.5
SNX29-204ENST00000564791 C2CD6Q53TS8 623 aa11.94□□□□□ -0.5
SNX29-204ENST00000564791 PPP1R2P3Q6NXS1 205 aa11.94□□□□□ -0.5
SNX29-204ENST00000564791 LLGL2Q6P1M3 1020 aa11.94□□□□□ -0.5
SNX29-204ENST00000564791 MMS22LQ6ZRQ5 1243 aa11.94□□□□□ -0.5
SNX29-204ENST00000564791 NPAS4Q8IUM7 802 aa11.94□□□□□ -0.5
SNX29-204ENST00000564791 COLGALT2Q8IYK4 626 aa11.94□□□□□ -0.5
SNX29-204ENST00000564791 ABI1Q8IZP0 508 aa11.94□□□□□ -0.5
SNX29-204ENST00000564791 CRIPAKQ8N1N5 446 aa11.94□□□□□ -0.5
SNX29-204ENST00000564791 WDTC1Q8N5D0 677 aa11.94□□□□□ -0.5
SNX29-204ENST00000564791 LRRC57Q8N9N7 239 aa11.94□□□□□ -0.5
SNX29-204ENST00000564791 HASPINQ8TF76 798 aa11.94□□□□□ -0.5
SNX29-204ENST00000564791 TRIM11Q96F44 468 aa11.94□□□□□ -0.5
SNX29-204ENST00000564791 CASD1Q96PB1 797 aa11.94□□□□□ -0.5
SNX29-204ENST00000564791 ZNF518BQ9C0D4 1074 aa11.94□□□□□ -0.5
SNX29-204ENST00000564791 LHX5Q9H2C1 402 aa11.94□□□□□ -0.5
SNX29-204ENST00000564791 FAM49BQ9NUQ9 324 aa11.94□□□□□ -0.5
SNX29-204ENST00000564791 ADAM22Q9P0K1 906 aa11.94□□□□□ -0.5
SNX29-204ENST00000564791 CTTNBP2NLQ9P2B4 639 aa11.94□□□□□ -0.5
SNX29-204ENST00000564791 PCDH10Q9P2E7 1040 aa11.94□□□□□ -0.5
SNX29-204ENST00000564791 KANSL3Q9P2N6 904 aa11.94□□□□□ -0.5
SNX29-204ENST00000564791 CYTH4Q9UIA0 394 aa11.94□□□□□ -0.5
SNX29-204ENST00000564791 KIAA1257Q9ULG3 409 aa11.94□□□□□ -0.5
SNX29-204ENST00000564791 STXBP5LQ9Y2K9 1186 aa11.94□□□□□ -0.5
SNX29-204ENST00000564791 I3L4J1 428 aa11.93□□□□□ -0.5
SNX29-204ENST00000564791 NCK2O43639 380 aa11.93□□□□□ -0.5
SNX29-204ENST00000564791 FTCDO95954 541 aa11.93□□□□□ -0.5
SNX29-204ENST00000564791 ITGB1P05556 798 aa11.93□□□□□ -0.5
SNX29-204ENST00000564791 FAM163BP0C2L3 166 aa11.93□□□□□ -0.5
SNX29-204ENST00000564791 MYBL1P10243 752 aa11.93□□□□□ -0.5
SNX29-204ENST00000564791 RRM1P23921 792 aa11.93□□□□□ -0.5
SNX29-204ENST00000564791 C1QBPQ07021 282 aaKnown RBP11.93□□□□□ -0.5
SNX29-204ENST00000564791 PPP1R26Q5T8A7 1209 aaPredicted RBP11.93□□□□□ -0.5
SNX29-204ENST00000564791 DCLRE1AQ6PJP8 1040 aa11.93□□□□□ -0.5
SNX29-204ENST00000564791 LCLAT1Q6UWP7 414 aa11.93□□□□□ -0.5
SNX29-204ENST00000564791 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.93□□□□□ -0.5
SNX29-204ENST00000564791 UBE2Q1Q7Z7E8 422 aa11.93□□□□□ -0.5
SNX29-204ENST00000564791 PHLDB2Q86SQ0 1253 aa11.93□□□□□ -0.5
SNX29-204ENST00000564791 CRYBG2Q8N1P7 616 aa11.93□□□□□ -0.5
SNX29-204ENST00000564791 NUP85Q9BW27 656 aa11.93□□□□□ -0.5
SNX29-204ENST00000564791 GOLPH3Q9H4A6 298 aa11.93□□□□□ -0.5
SNX29-204ENST00000564791 AVENQ9NQS1 362 aaPredicted RBP11.93□□□□□ -0.5
SNX29-204ENST00000564791 DNAJB4Q9UDY4 337 aa11.93□□□□□ -0.5
SNX29-204ENST00000564791 TSPAN16Q9UKR8 245 aa11.93□□□□□ -0.5
SNX29-204ENST00000564791 JRKLQ9Y4A0 524 aa11.93□□□□□ -0.5
SNX29-204ENST00000564791 TIMM13Q9Y5L4 95 aaPredicted RBP11.93□□□□□ -0.5
SNX29-204ENST00000564791 COL4A6Q14031 1691 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms