RNA–Protein interactions for RNA: ENST00000564606.5

ATXN3-249, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 645 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-249ENST00000564606 NIF3L1Q9GZT8 377 aa8.05□□□□□ -1.12
ATXN3-249ENST00000564606 IQCGQ9H095 443 aaKnown RBP8.05□□□□□ -1.12
ATXN3-249ENST00000564606 LHX5Q9H2C1 402 aa8.05□□□□□ -1.12
ATXN3-249ENST00000564606 EPB41L4BQ9H329 900 aa8.05□□□□□ -1.12
ATXN3-249ENST00000564606 RPAP3Q9H6T3 665 aaPredicted RBP8.05□□□□□ -1.12
ATXN3-249ENST00000564606 ECT2Q9H8V3 914 aa8.05□□□□□ -1.12
ATXN3-249ENST00000564606 MYOZ2Q9NPC6 264 aa8.05□□□□□ -1.12
ATXN3-249ENST00000564606 PDLIM7Q9NR12 457 aa8.05□□□□□ -1.12
ATXN3-249ENST00000564606 ASNSD1Q9NWL6 643 aa8.05□□□□□ -1.12
ATXN3-249ENST00000564606 NINJ2Q9NZG7 142 aa8.05□□□□□ -1.12
ATXN3-249ENST00000564606 PKD2L1Q9P0L9 805 aa8.05□□□□□ -1.12
ATXN3-249ENST00000564606 LIMD1Q9UGP4 676 aa8.05□□□□□ -1.12
ATXN3-249ENST00000564606 NAALADL1Q9UQQ1 740 aa8.05□□□□□ -1.12
ATXN3-249ENST00000564606 NR2E1Q9Y466 385 aa8.05□□□□□ -1.12
ATXN3-249ENST00000564606 CNTNAP1P78357 1384 aa8.05□□□□□ -1.12
ATXN3-249ENST00000564606 TMEM191CA6NGB0 347 aa8.04□□□□□ -1.12
ATXN3-249ENST00000564606 LRRIQ4A6NIV6 560 aa8.04□□□□□ -1.12
ATXN3-249ENST00000564606 ANKRD63C9JTQ0 380 aa8.04□□□□□ -1.12
ATXN3-249ENST00000564606 DNM1LO00429 736 aa8.04□□□□□ -1.12
ATXN3-249ENST00000564606 ABLIM1O14639 778 aa8.04□□□□□ -1.12
ATXN3-249ENST00000564606 PPP1R12AO14974 1030 aaPredicted RBP8.04□□□□□ -1.12
ATXN3-249ENST00000564606 MCF2LO15068 1137 aa8.04□□□□□ -1.12
ATXN3-249ENST00000564606 OGTO15294 1046 aa8.04□□□□□ -1.12
ATXN3-249ENST00000564606 LIASO43766 372 aa8.04□□□□□ -1.12
ATXN3-249ENST00000564606 GRIN3BO60391 1043 aa8.04□□□□□ -1.12
ATXN3-249ENST00000564606 TOM1L1O75674 476 aa8.04□□□□□ -1.12
ATXN3-249ENST00000564606 RAD17O75943 681 aa8.04□□□□□ -1.12
ATXN3-249ENST00000564606 UNC5CO95185 931 aa8.04□□□□□ -1.12
ATXN3-249ENST00000564606 OAS1P00973 400 aaKnown RBP8.04□□□□□ -1.12
ATXN3-249ENST00000564606 TMEM191BP0C7N4 346 aa8.04□□□□□ -1.12
ATXN3-249ENST00000564606 ZFXP17010 805 aaPredicted RBP8.04□□□□□ -1.12
ATXN3-249ENST00000564606 MMP8P22894 467 aa8.04□□□□□ -1.12
ATXN3-249ENST00000564606 ATICP31939 592 aa8.04□□□□□ -1.12
ATXN3-249ENST00000564606 ELF1P32519 619 aa8.04□□□□□ -1.12
ATXN3-249ENST00000564606 CDH5P33151 784 aaPredicted RBP8.04□□□□□ -1.12
ATXN3-249ENST00000564606 MSH2P43246 934 aa8.04□□□□□ -1.12
ATXN3-249ENST00000564606 KCNJ1P48048 391 aa8.04□□□□□ -1.12
ATXN3-249ENST00000564606 IFNAR2P48551 515 aa8.04□□□□□ -1.12
ATXN3-249ENST00000564606 SH3BGRP55822 239 aaPredicted RBP8.04□□□□□ -1.12
ATXN3-249ENST00000564606 BACE1P56817 501 aa8.04□□□□□ -1.12
ATXN3-249ENST00000564606 ACTR2P61160 394 aa8.04□□□□□ -1.12
ATXN3-249ENST00000564606 NOP14P78316 857 aaKnown RBP8.04□□□□□ -1.12
ATXN3-249ENST00000564606 SNX1Q13596 522 aa8.04□□□□□ -1.12
ATXN3-249ENST00000564606 BAATQ14032 418 aaPredicted RBP8.04□□□□□ -1.12
ATXN3-249ENST00000564606 SKIV2LQ15477 1246 aaKnown RBP8.04□□□□□ -1.12
ATXN3-249ENST00000564606 TBCCQ15814 346 aa8.04□□□□□ -1.12
ATXN3-249ENST00000564606 PDK4Q16654 411 aa8.04□□□□□ -1.12
ATXN3-249ENST00000564606 HIF1AQ16665 826 aa8.04□□□□□ -1.12
ATXN3-249ENST00000564606 QPCTQ16769 361 aa8.04□□□□□ -1.12
ATXN3-249ENST00000564606 P3H1Q32P28 736 aa8.04□□□□□ -1.12
ATXN3-249ENST00000564606 NBPF20Q3BBV1 942 aa8.04□□□□□ -1.12
ATXN3-249ENST00000564606 SLC45A4Q5BKX6 768 aa8.04□□□□□ -1.12
ATXN3-249ENST00000564606 WASHC2DQ5SRD0 308 aa8.04□□□□□ -1.12
ATXN3-249ENST00000564606 SNRNP48Q6IEG0 339 aaKnown RBP8.04□□□□□ -1.12
ATXN3-249ENST00000564606 ABHD15Q6UXT9 468 aa8.04□□□□□ -1.12
ATXN3-249ENST00000564606 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.04□□□□□ -1.12
ATXN3-249ENST00000564606 ANO5Q75V66 913 aa8.04□□□□□ -1.12
ATXN3-249ENST00000564606 BZW1Q7L1Q6 419 aaKnown RBP8.04□□□□□ -1.12
ATXN3-249ENST00000564606 PALB2Q86YC2 1186 aa8.04□□□□□ -1.12
ATXN3-249ENST00000564606 NT5DC4Q86YG4 428 aa8.04□□□□□ -1.12
ATXN3-249ENST00000564606 BRSK2Q8IWQ3 736 aa8.04□□□□□ -1.12
ATXN3-249ENST00000564606 PALM2Q8IXS6 379 aa8.04□□□□□ -1.12
ATXN3-249ENST00000564606 LMNTD2Q8IXW0 634 aa8.04□□□□□ -1.12
ATXN3-249ENST00000564606 SCYL3Q8IZE3 742 aa8.04□□□□□ -1.12
ATXN3-249ENST00000564606 ANKRD42Q8N9B4 389 aa8.04□□□□□ -1.12
ATXN3-249ENST00000564606 ZNF280CQ8ND82 737 aa8.04□□□□□ -1.12
ATXN3-249ENST00000564606 RAB3IL1Q8TBN0 382 aa8.04□□□□□ -1.12
ATXN3-249ENST00000564606 SEMA4DQ92854 862 aa8.04□□□□□ -1.12
ATXN3-249ENST00000564606 LRRC39Q96DD0 335 aa8.04□□□□□ -1.12
ATXN3-249ENST00000564606 ZBED3Q96IU2 234 aaPredicted RBP8.04□□□□□ -1.12
ATXN3-249ENST00000564606 CYTH2Q99418 400 aa8.04□□□□□ -1.12
ATXN3-249ENST00000564606 C11orf70Q9BRQ4 267 aa8.04□□□□□ -1.12
ATXN3-249ENST00000564606 TCHPQ9BT92 498 aa8.04□□□□□ -1.12
ATXN3-249ENST00000564606 GCOM2Q9BZD3 368 aaPredicted RBP8.04□□□□□ -1.12
ATXN3-249ENST00000564606 VPS11Q9H270 941 aa8.04□□□□□ -1.12
ATXN3-249ENST00000564606 TRABDQ9H4I3 376 aa8.04□□□□□ -1.12
ATXN3-249ENST00000564606 SYNCQ9H7C4 482 aa8.04□□□□□ -1.12
ATXN3-249ENST00000564606 VPS37BQ9H9H4 285 aa8.04□□□□□ -1.12
ATXN3-249ENST00000564606 RSAD1Q9HA92 442 aa8.04□□□□□ -1.12
ATXN3-249ENST00000564606 CYP3A43Q9HB55 503 aa8.04□□□□□ -1.12
ATXN3-249ENST00000564606 POLD4Q9HCU8 107 aa8.04□□□□□ -1.12
ATXN3-249ENST00000564606 SAYSD1Q9NPB0 183 aa8.04□□□□□ -1.12
ATXN3-249ENST00000564606 ARHGEF3Q9NR81 526 aa8.04□□□□□ -1.12
ATXN3-249ENST00000564606 FGFR1OP2Q9NVK5 253 aa8.04□□□□□ -1.12
ATXN3-249ENST00000564606 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.04□□□□□ -1.12
ATXN3-249ENST00000564606 MAFBQ9Y5Q3 323 aaPredicted RBP8.04□□□□□ -1.12
ATXN3-249ENST00000564606 CLUHO75153 1309 aa8.03□□□□□ -1.12
ATXN3-249ENST00000564606 MROH7Q68CQ1 1323 aa8.03□□□□□ -1.12
ATXN3-249ENST00000564606 SLX4Q8IY92 1834 aa8.03□□□□□ -1.12
ATXN3-249ENST00000564606 RGPD3A6NKT7 1758 aaPredicted RBP8.03□□□□□ -1.12
ATXN3-249ENST00000564606 RGPD4Q7Z3J3 1758 aa8.03□□□□□ -1.12
ATXN3-249ENST00000564606 SSC5DA1L4H1 1573 aa8.03□□□□□ -1.12
ATXN3-249ENST00000564606 A0A0B4J269 797 aa8.03□□□□□ -1.12
ATXN3-249ENST00000564606 SGK1O00141 431 aa8.03□□□□□ -1.12
ATXN3-249ENST00000564606 ADCY3O60266 1144 aa8.03□□□□□ -1.12
ATXN3-249ENST00000564606 ATP2C2O75185 946 aa8.03□□□□□ -1.12
ATXN3-249ENST00000564606 KRT37O76014 449 aa8.03□□□□□ -1.12
ATXN3-249ENST00000564606 ATG7O95352 703 aa8.03□□□□□ -1.12
ATXN3-249ENST00000564606 TGDSO95455 350 aa8.03□□□□□ -1.12
ATXN3-249ENST00000564606 NEFHP12036 1026 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms