RNA–Protein interactions for RNA: ENST00000564600.6

CHD9-211, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-211ENST00000564600 TCF15Q12870 199 aa3.93□□□□□ -1.78
CHD9-211ENST00000564600 TTF1Q15361 905 aaPredicted RBP3.93□□□□□ -1.78
CHD9-211ENST00000564600 USP37Q86T82 979 aa3.93□□□□□ -1.78
CHD9-211ENST00000564600 GRAMD1CQ8IYS0 662 aa3.93□□□□□ -1.78
CHD9-211ENST00000564600 HPS3Q969F9 1004 aa3.93□□□□□ -1.78
CHD9-211ENST00000564600 RFKQ969G6 155 aa3.93□□□□□ -1.78
CHD9-211ENST00000564600 AMBRA1Q9C0C7 1298 aa3.93□□□□□ -1.78
CHD9-211ENST00000564600 ARMT1Q9H993 441 aa3.93□□□□□ -1.78
CHD9-211ENST00000564600 SERHLQ9NQF3 203 aa3.93□□□□□ -1.78
CHD9-211ENST00000564600 RLIMQ9NVW2 624 aa3.93□□□□□ -1.78
CHD9-211ENST00000564600 DDX56Q9NY93 547 aaKnown RBP3.93□□□□□ -1.78
CHD9-211ENST00000564600 CFAP97Q9P2B7 532 aa3.93□□□□□ -1.78
CHD9-211ENST00000564600 ADAM21Q9UKJ8 722 aa3.93□□□□□ -1.78
CHD9-211ENST00000564600 NEU2Q9Y3R4 380 aa3.93□□□□□ -1.78
CHD9-211ENST00000564600 A0A0B4J269 797 aa3.92□□□□□ -1.78
CHD9-211ENST00000564600 E7ENX8 843 aa3.92□□□□□ -1.78
CHD9-211ENST00000564600 PROB1E7EW31 1015 aa3.92□□□□□ -1.78
CHD9-211ENST00000564600 M0QYG6 137 aa3.92□□□□□ -1.78
CHD9-211ENST00000564600 DCLK1O15075 740 aa3.92□□□□□ -1.78
CHD9-211ENST00000564600 SLC16A6O15403 523 aa3.92□□□□□ -1.78
CHD9-211ENST00000564600 PDGFRBP09619 1106 aa3.92□□□□□ -1.78
CHD9-211ENST00000564600 FTH1P19P0C7X4 201 aa3.92□□□□□ -1.78
CHD9-211ENST00000564600 PCSK6P29122 969 aa3.92□□□□□ -1.78
CHD9-211ENST00000564600 GRIA3P42263 894 aa3.92□□□□□ -1.78
CHD9-211ENST00000564600 NDUFV1P49821 464 aa3.92□□□□□ -1.78
CHD9-211ENST00000564600 ZNF134P52741 427 aa3.92□□□□□ -1.78
CHD9-211ENST00000564600 TAP2Q03519 686 aa3.92□□□□□ -1.78
CHD9-211ENST00000564600 TUBB3Q13509 450 aa3.92□□□□□ -1.78
CHD9-211ENST00000564600 PTPRRQ15256 657 aa3.92□□□□□ -1.78
CHD9-211ENST00000564600 ATAT1Q5SQI0 421 aa3.92□□□□□ -1.78
CHD9-211ENST00000564600 RBM20Q5T481 1227 aaKnown RBP3.92□□□□□ -1.78
CHD9-211ENST00000564600 TPH2Q8IWU9 490 aa3.92□□□□□ -1.78
CHD9-211ENST00000564600 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP3.92□□□□□ -1.78
CHD9-211ENST00000564600 AOPEPQ8N6M6 819 aa3.92□□□□□ -1.78
CHD9-211ENST00000564600 C9orf106Q8NAJ2 232 aa3.92□□□□□ -1.78
CHD9-211ENST00000564600 PCSK9Q8NBP7 692 aaKnown RBP3.92□□□□□ -1.78
CHD9-211ENST00000564600 NELL1Q92832 810 aa3.92□□□□□ -1.78
CHD9-211ENST00000564600 SLC35A4Q96G79 324 aa3.92□□□□□ -1.78
CHD9-211ENST00000564600 CGRRF1Q99675 332 aa3.92□□□□□ -1.78
CHD9-211ENST00000564600 WDCPQ9H6R7 721 aa3.92□□□□□ -1.78
CHD9-211ENST00000564600 ST6GALNAC1Q9NSC7 600 aaPredicted RBP3.92□□□□□ -1.78
CHD9-211ENST00000564600 PNPOQ9NVS9 261 aa3.92□□□□□ -1.78
CHD9-211ENST00000564600 ARPP21Q9UBL0 812 aaPredicted RBP3.92□□□□□ -1.78
CHD9-211ENST00000564600 PCDHA6Q9UN73 950 aa3.92□□□□□ -1.78
CHD9-211ENST00000564600 H3BUI4 141 aa3.91□□□□□ -1.78
CHD9-211ENST00000564600 AKAP10O43572 662 aa3.91□□□□□ -1.78
CHD9-211ENST00000564600 DTNBO60941 627 aa3.91□□□□□ -1.78
CHD9-211ENST00000564600 MYBP10242 640 aa3.91□□□□□ -1.78
CHD9-211ENST00000564600 RAB27AP51159 221 aa3.91□□□□□ -1.78
CHD9-211ENST00000564600 TSTD2Q5T7W7 516 aa3.91□□□□□ -1.78
CHD9-211ENST00000564600 AMIGO2Q86SJ2 522 aa3.91□□□□□ -1.78
CHD9-211ENST00000564600 FAM109AQ8N4B1 249 aa3.91□□□□□ -1.78
CHD9-211ENST00000564600 B3GALNT2Q8NCR0 500 aa3.91□□□□□ -1.78
CHD9-211ENST00000564600 FAM46DQ8NEK8 389 aa3.91□□□□□ -1.78
CHD9-211ENST00000564600 PGBD1Q96JS3 809 aa3.91□□□□□ -1.78
CHD9-211ENST00000564600 NT5C1BQ96P26 610 aa3.91□□□□□ -1.78
CHD9-211ENST00000564600 CNPPD1Q9BV87 410 aa3.91□□□□□ -1.78
CHD9-211ENST00000564600 ACTRT3Q9BYD9 372 aa3.91□□□□□ -1.78
CHD9-211ENST00000564600 TPSD1Q9BZJ3 242 aa3.91□□□□□ -1.78
CHD9-211ENST00000564600 CPNE5Q9HCH3 593 aa3.91□□□□□ -1.78
CHD9-211ENST00000564600 ANLNQ9NQW6 1124 aa3.91□□□□□ -1.78
CHD9-211ENST00000564600 GNL3LQ9NVN8 582 aaKnown RBP3.91□□□□□ -1.78
CHD9-211ENST00000564600 SLC17A6Q9P2U8 582 aa3.91□□□□□ -1.78
CHD9-211ENST00000564600 STAP2Q9UGK3 403 aa3.91□□□□□ -1.78
CHD9-211ENST00000564600 FEZ2Q9UHY8 353 aaPredicted RBP3.91□□□□□ -1.78
CHD9-211ENST00000564600 ZDHHC8Q9ULC8 765 aa3.91□□□□□ -1.78
CHD9-211ENST00000564600 THRAP3Q9Y2W1 955 aaKnown RBP3.91□□□□□ -1.78
CHD9-211ENST00000564600 SPATA31A3Q5VYP0 1347 aa3.91□□□□□ -1.78
CHD9-211ENST00000564600 hCG_2014768A0A024R1R8 64 aa3.9□□□□□ -1.79
CHD9-211ENST00000564600 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa3.9□□□□□ -1.79
CHD9-211ENST00000564600 WIPF3A6NGB9 483 aa3.9□□□□□ -1.79
CHD9-211ENST00000564600 PPM1DO15297 605 aa3.9□□□□□ -1.79
CHD9-211ENST00000564600 AP1G1O43747 822 aa3.9□□□□□ -1.79
CHD9-211ENST00000564600 UNC5CO95185 931 aa3.9□□□□□ -1.79
CHD9-211ENST00000564600 ARIH2O95376 493 aa3.9□□□□□ -1.79
CHD9-211ENST00000564600 CHEK2O96017 543 aa3.9□□□□□ -1.79
CHD9-211ENST00000564600 PIM1P11309 404 aaPredicted RBP3.9□□□□□ -1.79
CHD9-211ENST00000564600 JUPP14923 745 aa3.9□□□□□ -1.79
CHD9-211ENST00000564600 IBSPP21815 317 aaPredicted RBP3.9□□□□□ -1.79
CHD9-211ENST00000564600 AKAP5P24588 427 aa3.9□□□□□ -1.79
CHD9-211ENST00000564600 GCLCP48506 637 aaPredicted RBP3.9□□□□□ -1.79
CHD9-211ENST00000564600 SOX8P57073 446 aa3.9□□□□□ -1.79
CHD9-211ENST00000564600 EIF2B5Q13144 721 aaKnown RBP3.9□□□□□ -1.79
CHD9-211ENST00000564600 PIN1Q13526 163 aaPredicted RBP3.9□□□□□ -1.79
CHD9-211ENST00000564600 AKNAD1Q5T1N1 836 aa3.9□□□□□ -1.79
CHD9-211ENST00000564600 THEMIS2Q5TEJ8 643 aa3.9□□□□□ -1.79
CHD9-211ENST00000564600 B3GNT9Q6UX72 402 aa3.9□□□□□ -1.79
CHD9-211ENST00000564600 TMEM108Q6UXF1 575 aa3.9□□□□□ -1.79
CHD9-211ENST00000564600 PPP1R35Q8TAP8 253 aa3.9□□□□□ -1.79
CHD9-211ENST00000564600 DIS3LQ8TF46 1054 aaKnown RBP3.9□□□□□ -1.79
CHD9-211ENST00000564600 JPH3Q8WXH2 748 aaPredicted RBP3.9□□□□□ -1.79
CHD9-211ENST00000564600 LRGUKQ96M69 825 aa3.9□□□□□ -1.79
CHD9-211ENST00000564600 UROC1Q96N76 676 aa3.9□□□□□ -1.79
CHD9-211ENST00000564600 SLC46A1Q96NT5 459 aa3.9□□□□□ -1.79
CHD9-211ENST00000564600 OSBPL9Q96SU4 736 aa3.9□□□□□ -1.79
CHD9-211ENST00000564600 NUP88Q99567 741 aaPredicted RBP3.9□□□□□ -1.79
CHD9-211ENST00000564600 TIMP4Q99727 224 aa3.9□□□□□ -1.79
CHD9-211ENST00000564600 TTYH3Q9C0H2 523 aa3.9□□□□□ -1.79
CHD9-211ENST00000564600 KLC4Q9NSK0 619 aa3.9□□□□□ -1.79
CHD9-211ENST00000564600 ANKRD6Q9Y2G4 727 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms