RNA–Protein interactions for RNA: ENST00000564540.5

UBR1-205, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-205ENST00000564540 KHDC1LQ5JSQ8 128 aa6.15□□□□□ -1.42
UBR1-205ENST00000564540 ODR4Q5SWX8 454 aa6.15□□□□□ -1.42
UBR1-205ENST00000564540 RBM20Q5T481 1227 aaKnown RBP6.15□□□□□ -1.42
UBR1-205ENST00000564540 DPY19L2P1Q6NXN4 242 aa6.15□□□□□ -1.42
UBR1-205ENST00000564540 B3GNT9Q6UX72 402 aa6.15□□□□□ -1.42
UBR1-205ENST00000564540 ARHGEF25Q86VW2 580 aa6.15□□□□□ -1.42
UBR1-205ENST00000564540 PPP1R35Q8TAP8 253 aa6.15□□□□□ -1.42
UBR1-205ENST00000564540 PGBD1Q96JS3 809 aa6.15□□□□□ -1.42
UBR1-205ENST00000564540 AIFM3Q96NN9 605 aa6.15□□□□□ -1.42
UBR1-205ENST00000564540 ACO2Q99798 780 aaKnown RBP6.15□□□□□ -1.42
UBR1-205ENST00000564540 TPSD1Q9BZJ3 242 aa6.15□□□□□ -1.42
UBR1-205ENST00000564540 SIK2Q9H0K1 926 aa6.15□□□□□ -1.42
UBR1-205ENST00000564540 KLK15Q9H2R5 256 aa6.15□□□□□ -1.42
UBR1-205ENST00000564540 NMRK2Q9NPI5 230 aa6.15□□□□□ -1.42
UBR1-205ENST00000564540 CPA4Q9UI42 421 aa6.15□□□□□ -1.42
UBR1-205ENST00000564540 RAD54BQ9Y620 910 aa6.15□□□□□ -1.42
UBR1-205ENST00000564540 SPATA31A3Q5VYP0 1347 aa6.15□□□□□ -1.43
UBR1-205ENST00000564540 TRIAP1O43715 76 aa6.14□□□□□ -1.43
UBR1-205ENST00000564540 PIM1P11309 404 aaPredicted RBP6.14□□□□□ -1.43
UBR1-205ENST00000564540 HSPA6P17066 643 aa6.14□□□□□ -1.43
UBR1-205ENST00000564540 ITGALP20701 1170 aa6.14□□□□□ -1.43
UBR1-205ENST00000564540 GCLCP48506 637 aaPredicted RBP6.14□□□□□ -1.43
UBR1-205ENST00000564540 CACNA2D1P54289 1103 aa6.14□□□□□ -1.43
UBR1-205ENST00000564540 ITIH3Q06033 890 aa6.14□□□□□ -1.43
UBR1-205ENST00000564540 PTPRRQ15256 657 aa6.14□□□□□ -1.43
UBR1-205ENST00000564540 PLEKHG6Q3KR16 790 aa6.14□□□□□ -1.43
UBR1-205ENST00000564540 EMC10Q5UCC4 262 aa6.14□□□□□ -1.43
UBR1-205ENST00000564540 VPS53Q5VIR6 699 aa6.14□□□□□ -1.43
UBR1-205ENST00000564540 FAM160B1Q5W0V3 765 aa6.14□□□□□ -1.43
UBR1-205ENST00000564540 EPM2AIP1Q7L775 607 aaPredicted RBP6.14□□□□□ -1.43
UBR1-205ENST00000564540 SLC35G2Q8TBE7 412 aa6.14□□□□□ -1.43
UBR1-205ENST00000564540 DDX17Q92841 729 aaKnown RBP6.14□□□□□ -1.43
UBR1-205ENST00000564540 MTFMTQ96DP5 389 aaKnown RBP6.14□□□□□ -1.43
UBR1-205ENST00000564540 TAAR9Q96RI9 348 aa6.14□□□□□ -1.43
UBR1-205ENST00000564540 HEPHQ9BQS7 1158 aa6.14□□□□□ -1.43
UBR1-205ENST00000564540 LRFN3Q9BTN0 628 aa6.14□□□□□ -1.43
UBR1-205ENST00000564540 ACTRT3Q9BYD9 372 aa6.14□□□□□ -1.43
UBR1-205ENST00000564540 AMBRA1Q9C0C7 1298 aa6.14□□□□□ -1.43
UBR1-205ENST00000564540 ASB6Q9NWX5 421 aa6.14□□□□□ -1.43
UBR1-205ENST00000564540 PTGFRNQ9P2B2 879 aa6.14□□□□□ -1.43
UBR1-205ENST00000564540 ADGRA2Q96PE1 1338 aa6.14□□□□□ -1.43
UBR1-205ENST00000564540 KAT6AQ92794 2004 aa6.13□□□□□ -1.43
UBR1-205ENST00000564540 WDR27A2RRH5 827 aa6.13□□□□□ -1.43
UBR1-205ENST00000564540 C1QL1O75973 258 aa6.13□□□□□ -1.43
UBR1-205ENST00000564540 UBXN7O94888 489 aa6.13□□□□□ -1.43
UBR1-205ENST00000564540 UNC5CO95185 931 aa6.13□□□□□ -1.43
UBR1-205ENST00000564540 HTR1BP28222 390 aa6.13□□□□□ -1.43
UBR1-205ENST00000564540 GRIA3P42263 894 aa6.13□□□□□ -1.43
UBR1-205ENST00000564540 IL12RB1P42701 662 aa6.13□□□□□ -1.43
UBR1-205ENST00000564540 KCNJ5P48544 419 aa6.13□□□□□ -1.43
UBR1-205ENST00000564540 RAB1AP62820 205 aa6.13□□□□□ -1.43
UBR1-205ENST00000564540 NBPF8Q3BBV2 869 aa6.13□□□□□ -1.43
UBR1-205ENST00000564540 DENND1CQ8IV53 801 aa6.13□□□□□ -1.43
UBR1-205ENST00000564540 ZNF764Q96H86 408 aaPredicted RBP6.13□□□□□ -1.43
UBR1-205ENST00000564540 SLC46A1Q96NT5 459 aa6.13□□□□□ -1.43
UBR1-205ENST00000564540 NT5C1BQ96P26 610 aa6.13□□□□□ -1.43
UBR1-205ENST00000564540 OSBPL9Q96SU4 736 aa6.13□□□□□ -1.43
UBR1-205ENST00000564540 TTYH3Q9C0H2 523 aa6.13□□□□□ -1.43
UBR1-205ENST00000564540 SARS2Q9NP81 518 aaKnown RBP6.13□□□□□ -1.43
UBR1-205ENST00000564540 SEMA4GQ9NTN9 838 aa6.13□□□□□ -1.43
UBR1-205ENST00000564540 GABBR1Q9UBS5 961 aa6.13□□□□□ -1.43
UBR1-205ENST00000564540 NOB1Q9ULX3 412 aaKnown RBP6.13□□□□□ -1.43
UBR1-205ENST00000564540 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.13□□□□□ -1.43
UBR1-205ENST00000564540 COX11Q9Y6N1 276 aa6.13□□□□□ -1.43
UBR1-205ENST00000564540 LINC00473A8K010 186 aa6.12□□□□□ -1.43
UBR1-205ENST00000564540 H3BML4 177 aa6.12□□□□□ -1.43
UBR1-205ENST00000564540 DCLK1O15075 740 aa6.12□□□□□ -1.43
UBR1-205ENST00000564540 RFPL1O75677 317 aa6.12□□□□□ -1.43
UBR1-205ENST00000564540 IGLV2-14P01704 120 aa6.12□□□□□ -1.43
UBR1-205ENST00000564540 PDHA1P08559 390 aa6.12□□□□□ -1.43
UBR1-205ENST00000564540 CD6P30203 668 aa6.12□□□□□ -1.43
UBR1-205ENST00000564540 ZNF134P52741 427 aa6.12□□□□□ -1.43
UBR1-205ENST00000564540 NXPH1P58417 271 aa6.12□□□□□ -1.43
UBR1-205ENST00000564540 LRRC41Q15345 812 aa6.12□□□□□ -1.43
UBR1-205ENST00000564540 TMEM108Q6UXF1 575 aa6.12□□□□□ -1.43
UBR1-205ENST00000564540 COL23A1Q86Y22 540 aaPredicted RBP6.12□□□□□ -1.43
UBR1-205ENST00000564540 ZBTB34Q8NCN2 500 aa6.12□□□□□ -1.43
UBR1-205ENST00000564540 CAMKK2Q96RR4 588 aa6.12□□□□□ -1.43
UBR1-205ENST00000564540 KLC4Q9NSK0 619 aa6.12□□□□□ -1.43
UBR1-205ENST00000564540 SLC17A6Q9P2U8 582 aa6.12□□□□□ -1.43
UBR1-205ENST00000564540 HESX1Q9UBX0 185 aa6.12□□□□□ -1.43
UBR1-205ENST00000564540 ST3GAL5Q9UNP4 418 aa6.12□□□□□ -1.43
UBR1-205ENST00000564540 TNFRSF18Q9Y5U5 241 aa6.12□□□□□ -1.43
UBR1-205ENST00000564540 A0A088AWK7 358 aa6.11□□□□□ -1.43
UBR1-205ENST00000564540 LRRC3CA6NJW4 275 aa6.11□□□□□ -1.43
UBR1-205ENST00000564540 PRPF3O43395 683 aaKnown RBP6.11□□□□□ -1.43
UBR1-205ENST00000564540 ELLP55199 621 aaPredicted RBP6.11□□□□□ -1.43
UBR1-205ENST00000564540 GTF2H3Q13889 308 aa6.11□□□□□ -1.43
UBR1-205ENST00000564540 AKNAD1Q5T1N1 836 aa6.11□□□□□ -1.43
UBR1-205ENST00000564540 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.11□□□□□ -1.43
UBR1-205ENST00000564540 FKBP10Q96AY3 582 aa6.11□□□□□ -1.43
UBR1-205ENST00000564540 FAM136AQ96C01 138 aa6.11□□□□□ -1.43
UBR1-205ENST00000564540 MRGPRX1Q96LB2 322 aa6.11□□□□□ -1.43
UBR1-205ENST00000564540 P2RX7Q99572 595 aaKnown RBP6.11□□□□□ -1.43
UBR1-205ENST00000564540 DKK3Q9UBP4 350 aa6.11□□□□□ -1.43
UBR1-205ENST00000564540 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.11□□□□□ -1.43
UBR1-205ENST00000564540 CCDC151A5D8V7 595 aa6.1□□□□□ -1.43
UBR1-205ENST00000564540 MASP2O00187 686 aa6.1□□□□□ -1.43
UBR1-205ENST00000564540 SOAT2O75908 522 aa6.1□□□□□ -1.43
UBR1-205ENST00000564540 GRPP07492 148 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms