RNA–Protein interactions for RNA: ENST00000564387.5

USB1-209, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-209ENST00000564387 KRT39Q6A163 491 aa18.54■□□□□ 0.56
USB1-209ENST00000564387 FAM171BQ6P995 826 aa18.54■□□□□ 0.56
USB1-209ENST00000564387 DCP1BQ8IZD4 617 aaKnown RBP18.54■□□□□ 0.56
USB1-209ENST00000564387 ATAD1Q8NBU5 361 aa18.54■□□□□ 0.56
USB1-209ENST00000564387 FAXDC2Q96IV6 333 aa18.54■□□□□ 0.56
USB1-209ENST00000564387 NME7Q9Y5B8 376 aa18.54■□□□□ 0.56
USB1-209ENST00000564387 NOTCH4Q99466 2003 aa18.54■□□□□ 0.56
USB1-209ENST00000564387 CLUHO75153 1309 aa18.53■□□□□ 0.56
USB1-209ENST00000564387 CCL16O15467 120 aa18.53■□□□□ 0.56
USB1-209ENST00000564387 LMO2P25791 158 aa18.53■□□□□ 0.56
USB1-209ENST00000564387 NLRP12P59046 1061 aa18.53■□□□□ 0.56
USB1-209ENST00000564387 TNNC1P63316 161 aa18.53■□□□□ 0.56
USB1-209ENST00000564387 DUSP4Q13115 394 aa18.53■□□□□ 0.56
USB1-209ENST00000564387 NFE2Q16621 373 aaPredicted RBP18.53■□□□□ 0.56
USB1-209ENST00000564387 ZNF699Q32M78 642 aa18.53■□□□□ 0.56
USB1-209ENST00000564387 SLC39A12Q504Y0 691 aa18.53■□□□□ 0.56
USB1-209ENST00000564387 ZNF667Q5HYK9 610 aa18.53■□□□□ 0.56
USB1-209ENST00000564387 CT47A1Q5JQC4 288 aaPredicted RBP18.53■□□□□ 0.56
USB1-209ENST00000564387 ZDHHC14Q8IZN3 488 aa18.53■□□□□ 0.56
USB1-209ENST00000564387 SPPL2BQ8TCT7 592 aa18.53■□□□□ 0.56
USB1-209ENST00000564387 TAS1R2Q8TE23 839 aa18.53■□□□□ 0.56
USB1-209ENST00000564387 PGLYRP2Q96PD5 576 aa18.53■□□□□ 0.56
USB1-209ENST00000564387 MMS19Q96T76 1030 aa18.53■□□□□ 0.56
USB1-209ENST00000564387 MRPL45Q9BRJ2 306 aaKnown RBP18.53■□□□□ 0.56
USB1-209ENST00000564387 TMLHEQ9NVH6 421 aa18.53■□□□□ 0.56
USB1-209ENST00000564387 DNMT3BQ9UBC3 853 aaKnown RBP18.53■□□□□ 0.56
USB1-209ENST00000564387 CDH9Q9ULB4 789 aa18.53■□□□□ 0.56
USB1-209ENST00000564387 NR2E1Q9Y466 385 aa18.53■□□□□ 0.56
USB1-209ENST00000564387 DOCK6Q96HP0 2047 aa18.52■□□□□ 0.56
USB1-209ENST00000564387 TNFRSF10AO00220 468 aa18.52■□□□□ 0.56
USB1-209ENST00000564387 DLL1O00548 723 aa18.52■□□□□ 0.56
USB1-209ENST00000564387 N4BP1O75113 896 aaKnown RBP18.52■□□□□ 0.56
USB1-209ENST00000564387 GNA14O95837 355 aa18.52■□□□□ 0.56
USB1-209ENST00000564387 ERCC5P28715 1186 aaPredicted RBP18.52■□□□□ 0.56
USB1-209ENST00000564387 EPHA5P54756 1037 aa18.52■□□□□ 0.56
USB1-209ENST00000564387 STX17P56962 302 aa18.52■□□□□ 0.56
USB1-209ENST00000564387 TSPY1Q01534 308 aa18.52■□□□□ 0.56
USB1-209ENST00000564387 DPCR1Q3MIW9 517 aa18.52■□□□□ 0.56
USB1-209ENST00000564387 BCO2Q9BYV7 579 aa18.52■□□□□ 0.56
USB1-209ENST00000564387 PIDD1Q9HB75 910 aa18.52■□□□□ 0.56
USB1-209ENST00000564387 ABCB6Q9NP58 842 aa18.52■□□□□ 0.56
USB1-209ENST00000564387 CEP72Q9P209 647 aa18.52■□□□□ 0.56
USB1-209ENST00000564387 POLIQ9UNA4 740 aa18.52■□□□□ 0.56
USB1-209ENST00000564387 YIPF1Q9Y548 306 aa18.52■□□□□ 0.56
USB1-209ENST00000564387 C2CD4DB7Z1M9 353 aa18.51■□□□□ 0.55
USB1-209ENST00000564387 HCRTO43612 131 aa18.51■□□□□ 0.55
USB1-209ENST00000564387 LRG1P02750 347 aa18.51■□□□□ 0.55
USB1-209ENST00000564387 HAPLN1P10915 354 aaPredicted RBP18.51■□□□□ 0.55
USB1-209ENST00000564387 ACAT1P24752 427 aaKnown RBP18.51■□□□□ 0.55
USB1-209ENST00000564387 GNL1P36915 607 aaPredicted RBP18.51■□□□□ 0.55
USB1-209ENST00000564387 PIK3CAP42336 1068 aa18.51■□□□□ 0.55
USB1-209ENST00000564387 ASPAP45381 313 aa18.51■□□□□ 0.55
USB1-209ENST00000564387 TUFMP49411 452 aaKnown RBP18.51■□□□□ 0.55
USB1-209ENST00000564387 MXI1P50539 228 aa18.51■□□□□ 0.55
USB1-209ENST00000564387 TWF1Q12792 350 aa18.51■□□□□ 0.55
USB1-209ENST00000564387 CFAP221Q4G0U5 840 aa18.51■□□□□ 0.55
USB1-209ENST00000564387 CBWD6Q4V339 395 aa18.51■□□□□ 0.55
USB1-209ENST00000564387 CBWD3Q5JTY5 395 aa18.51■□□□□ 0.55
USB1-209ENST00000564387 CBWD5Q5RIA9 395 aa18.51■□□□□ 0.55
USB1-209ENST00000564387 OTOP3Q7RTS5 596 aa18.51■□□□□ 0.55
USB1-209ENST00000564387 GRASPQ7Z6J2 395 aaPredicted RBP18.51■□□□□ 0.55
USB1-209ENST00000564387 TRIM59Q8IWR1 403 aa18.51■□□□□ 0.55
USB1-209ENST00000564387 TTC9BQ8N6N2 239 aa18.51■□□□□ 0.55
USB1-209ENST00000564387 FBXL13Q8NEE6 735 aa18.51■□□□□ 0.55
USB1-209ENST00000564387 SEMA4DQ92854 862 aa18.51■□□□□ 0.55
USB1-209ENST00000564387 FUBP3Q96I24 572 aaKnown RBP eCLIP18.51■□□□□ 0.55
USB1-209ENST00000564387 RPGRIP1Q96KN7 1286 aa18.51■□□□□ 0.55
USB1-209ENST00000564387 SRRTQ9BXP5 876 aaKnown RBP18.51■□□□□ 0.55
USB1-209ENST00000564387 SDCBP2Q9H190 292 aa18.51■□□□□ 0.55
USB1-209ENST00000564387 DNAJC25Q9H1X3 360 aa18.51■□□□□ 0.55
USB1-209ENST00000564387 APOBEC3GQ9HC16 384 aaKnown RBP18.51■□□□□ 0.55
USB1-209ENST00000564387 RAB20Q9NX57 234 aa18.51■□□□□ 0.55
USB1-209ENST00000564387 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.51■□□□□ 0.55
USB1-209ENST00000564387 NXF1Q9UBU9 619 aaKnown RBP18.51■□□□□ 0.55
USB1-209ENST00000564387 MYBPHLA2RUH7 354 aa18.5■□□□□ 0.55
USB1-209ENST00000564387 LRRN2O75325 713 aa18.5■□□□□ 0.55
USB1-209ENST00000564387 MICAL2O94851 1124 aa18.5■□□□□ 0.55
USB1-209ENST00000564387 FGFR1OPO95684 399 aaKnown RBP18.5■□□□□ 0.55
USB1-209ENST00000564387 P4HA1P13674 534 aa18.5■□□□□ 0.55
USB1-209ENST00000564387 PTPN2P17706 415 aa18.5■□□□□ 0.55
USB1-209ENST00000564387 PLD1Q13393 1074 aa18.5■□□□□ 0.55
USB1-209ENST00000564387 IRF2BP1Q8IU81 584 aa18.5■□□□□ 0.55
USB1-209ENST00000564387 PLCD3Q8N3E9 789 aa18.5■□□□□ 0.55
USB1-209ENST00000564387 SYT15Q9BQS2 421 aa18.5■□□□□ 0.55
USB1-209ENST00000564387 LRRC3Q9BY71 257 aa18.5■□□□□ 0.55
USB1-209ENST00000564387 SMYD3Q9H7B4 428 aa18.5■□□□□ 0.55
USB1-209ENST00000564387 CRTAC1Q9NQ79 661 aa18.5■□□□□ 0.55
USB1-209ENST00000564387 HCFC1R1Q9NWW0 138 aa18.5■□□□□ 0.55
USB1-209ENST00000564387 EPS15L1Q9UBC2 864 aa18.5■□□□□ 0.55
USB1-209ENST00000564387 GTF3C4Q9UKN8 822 aa18.5■□□□□ 0.55
USB1-209ENST00000564387 SLC27A5Q9Y2P5 690 aa18.5■□□□□ 0.55
USB1-209ENST00000564387 ASB3Q9Y575 518 aa18.5■□□□□ 0.55
USB1-209ENST00000564387 PCDHB5Q9Y5E4 795 aa18.5■□□□□ 0.55
USB1-209ENST00000564387 DOCK8Q8NF50 2099 aa18.5■□□□□ 0.55
USB1-209ENST00000564387 ATP2C2O75185 946 aa18.49■□□□□ 0.55
USB1-209ENST00000564387 RHOP08100 348 aa18.49■□□□□ 0.55
USB1-209ENST00000564387 CDH8P55286 799 aa18.49■□□□□ 0.55
USB1-209ENST00000564387 NOP14P78316 857 aaKnown RBP18.49■□□□□ 0.55
USB1-209ENST00000564387 NTHL1P78549 312 aa18.49■□□□□ 0.55
USB1-209ENST00000564387 INCA1Q0VD86 236 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms