RNA–Protein interactions for RNA: ENST00000564288.5

MACF1-231, Transcript of microtubule-actin crosslinking factor 1, human

APPRIS ALT2 TSL 5 BASIC

Gene MACF1, Length 24,828 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MACF1-231	ENST00000564288	EHD1	Q9H4M9	534 aa		4.44	□□□□□ -1.7
MACF1-231	ENST00000564288	TTLL3	Q9Y4R7	772 aa		4.44	□□□□□ -1.7
MACF1-231	ENST00000564288	ZBTB11	O95625	1053 aa	Predicted RBP	4.44	□□□□□ -1.7
MACF1-231	ENST00000564288	ALAD	P13716	330 aa		4.44	□□□□□ -1.7
MACF1-231	ENST00000564288	NLRP11	P59045	1033 aa	Known RBP	4.44	□□□□□ -1.7
MACF1-231	ENST00000564288	ACTR3	P61158	418 aa		4.44	□□□□□ -1.7
MACF1-231	ENST00000564288	NEDD1	Q8NHV4	660 aa		4.44	□□□□□ -1.7
MACF1-231	ENST00000564288	RP9	Q8TA86	221 aa	Known RBP	4.44	□□□□□ -1.7
MACF1-231	ENST00000564288	VCPIP1	Q96JH7	1222 aa		4.44	□□□□□ -1.7
MACF1-231	ENST00000564288	REXO4	Q9GZR2	422 aa	Known RBP	4.44	□□□□□ -1.7
MACF1-231	ENST00000564288	ATP6V1H	Q9UI12	483 aa		4.44	□□□□□ -1.7
MACF1-231	ENST00000564288	DENND2A	Q9ULE3	1009 aa		4.44	□□□□□ -1.7
MACF1-231	ENST00000564288	AGAP1	Q9UPQ3	857 aa		4.44	□□□□□ -1.7
MACF1-231	ENST00000564288	TAC1	P20366	129 aa		4.44	□□□□□ -1.7
MACF1-231	ENST00000564288	HSPA2	P54652	639 aa		4.44	□□□□□ -1.7
MACF1-231	ENST00000564288	GPS1	Q13098	491 aa		4.44	□□□□□ -1.7
MACF1-231	ENST00000564288	TTC23	Q5W5X9	447 aa		4.44	□□□□□ -1.7
MACF1-231	ENST00000564288	CCDC17	Q96LX7	622 aa		4.44	□□□□□ -1.7
MACF1-231	ENST00000564288	PARVA	Q9NVD7	372 aa		4.44	□□□□□ -1.7
MACF1-231	ENST00000564288	MRPL11	Q9Y3B7	192 aa	Known RBP	4.44	□□□□□ -1.7
MACF1-231	ENST00000564288	SNPH	O15079	494 aa		4.44	□□□□□ -1.7
MACF1-231	ENST00000564288	PSMD3	O43242	534 aa		4.44	□□□□□ -1.7
MACF1-231	ENST00000564288	SOX6	P35712	828 aa		4.44	□□□□□ -1.7
MACF1-231	ENST00000564288	OTUD4	Q01804	1114 aa	Known RBP	4.44	□□□□□ -1.7
MACF1-231	ENST00000564288	NAB1	Q13506	487 aa		4.44	□□□□□ -1.7
MACF1-231	ENST00000564288	RAB44	Q7Z6P3	723 aa	Predicted RBP	4.44	□□□□□ -1.7
MACF1-231	ENST00000564288	TRIM9	Q9C026	710 aa		4.44	□□□□□ -1.7
MACF1-231	ENST00000564288	NPHS2	Q9NP85	383 aa		4.44	□□□□□ -1.7
MACF1-231	ENST00000564288	TRMT112	Q9UI30	125 aa	Known RBP	4.44	□□□□□ -1.7
MACF1-231	ENST00000564288		F8W031	263 aa	Predicted RBP	4.44	□□□□□ -1.7
MACF1-231	ENST00000564288	NCKAP1L	P55160	1127 aa		4.44	□□□□□ -1.7
MACF1-231	ENST00000564288	RAD51	Q06609	339 aa		4.44	□□□□□ -1.7
MACF1-231	ENST00000564288	CIAPIN1	Q6FI81	312 aa		4.44	□□□□□ -1.7
MACF1-231	ENST00000564288	TDRP	Q86YL5	185 aa		4.44	□□□□□ -1.7
MACF1-231	ENST00000564288	AMER2	Q8N7J2	671 aa		4.44	□□□□□ -1.7
MACF1-231	ENST00000564288	SUCLG2	Q96I99	432 aa		4.44	□□□□□ -1.7
MACF1-231	ENST00000564288	FAM20A	Q96MK3	541 aa		4.44	□□□□□ -1.7
MACF1-231	ENST00000564288	RABL2A	Q9UBK7	228 aa	Predicted RBP	4.44	□□□□□ -1.7
MACF1-231	ENST00000564288	HPS5	Q9UPZ3	1129 aa		4.44	□□□□□ -1.7
MACF1-231	ENST00000564288	CLOCK	O15516	846 aa		4.44	□□□□□ -1.7
MACF1-231	ENST00000564288	IDI1	Q13907	227 aa		4.44	□□□□□ -1.7
MACF1-231	ENST00000564288	LINC00299	Q6ZSB3	139 aa		4.44	□□□□□ -1.7
MACF1-231	ENST00000564288	EYA1	Q99502	592 aa		4.44	□□□□□ -1.7
MACF1-231	ENST00000564288	MROH7-TTC4	A0A0A0MT08	1334 aa		4.44	□□□□□ -1.7
MACF1-231	ENST00000564288	STX7	O15400	261 aa	Known RBP	4.44	□□□□□ -1.7
MACF1-231	ENST00000564288	DNAJB2	P25686	324 aa		4.44	□□□□□ -1.7
MACF1-231	ENST00000564288	NFKBIA	P25963	317 aa		4.44	□□□□□ -1.7
MACF1-231	ENST00000564288	YWHAG	P61981	247 aa	Known RBP eCLIP	4.44	□□□□□ -1.7
MACF1-231	ENST00000564288	CCDC126	Q96EE4	140 aa		4.44	□□□□□ -1.7
MACF1-231	ENST00000564288	PSME2	Q9UL46	239 aa		4.44	□□□□□ -1.7
MACF1-231	ENST00000564288	PCDHA3	Q9Y5H8	950 aa		4.44	□□□□□ -1.7
MACF1-231	ENST00000564288	ARHGEF35	A5YM69	484 aa		4.44	□□□□□ -1.7
MACF1-231	ENST00000564288	EPHB1	P54762	984 aa		4.44	□□□□□ -1.7
MACF1-231	ENST00000564288	PPP2R5D	Q14738	602 aa		4.44	□□□□□ -1.7
MACF1-231	ENST00000564288	SPIRE2	Q8WWL2	714 aa		4.44	□□□□□ -1.7
MACF1-231	ENST00000564288	AIFM3	Q96NN9	605 aa		4.44	□□□□□ -1.7
MACF1-231	ENST00000564288	PCSK1N	Q9UHG2	260 aa		4.44	□□□□□ -1.7
MACF1-231	ENST00000564288	PALLD	Q8WX93	1383 aa		4.44	□□□□□ -1.7
MACF1-231	ENST00000564288	FKBP9	O95302	570 aa		4.44	□□□□□ -1.7
MACF1-231	ENST00000564288	ENO1	P06733	434 aa	Known RBP	4.44	□□□□□ -1.7
MACF1-231	ENST00000564288	ALOX15	P16050	662 aa	Predicted RBP	4.44	□□□□□ -1.7
MACF1-231	ENST00000564288	WASHC5	Q12768	1159 aa		4.44	□□□□□ -1.7
MACF1-231	ENST00000564288	KIAA1841	Q6NSI8	718 aa		4.44	□□□□□ -1.7
MACF1-231	ENST00000564288	APOL4	Q9BPW4	351 aa		4.44	□□□□□ -1.7
MACF1-231	ENST00000564288	LRRC19	Q9H756	370 aa		4.44	□□□□□ -1.7
MACF1-231	ENST00000564288	NSMCE4A	Q9NXX6	385 aa		4.44	□□□□□ -1.7
MACF1-231	ENST00000564288	EFR3B	Q9Y2G0	817 aa		4.44	□□□□□ -1.7
MACF1-231	ENST00000564288	FCHO1	O14526	889 aa		4.44	□□□□□ -1.7
MACF1-231	ENST00000564288	KRT24	Q2M2I5	525 aa		4.44	□□□□□ -1.7
MACF1-231	ENST00000564288	DCAF17	Q5H9S7	520 aa	Predicted RBP	4.44	□□□□□ -1.7
MACF1-231	ENST00000564288	MPRIP	Q6WCQ1	1025 aa		4.44	□□□□□ -1.7
MACF1-231	ENST00000564288	ARC	Q7LC44	396 aa		4.44	□□□□□ -1.7
MACF1-231	ENST00000564288	BTBD6	Q96KE9	485 aa		4.44	□□□□□ -1.7
MACF1-231	ENST00000564288	SENP3	Q9H4L4	574 aa	Predicted RBP	4.44	□□□□□ -1.7
MACF1-231	ENST00000564288	DHX33	Q9H6R0	707 aa	Known RBP	4.44	□□□□□ -1.7
MACF1-231	ENST00000564288	LMCD1	Q9NZU5	365 aa		4.44	□□□□□ -1.7
MACF1-231	ENST00000564288	B3GNT3	Q9Y2A9	372 aa		4.44	□□□□□ -1.7
MACF1-231	ENST00000564288	CARNS1	A5YM72	827 aa		4.44	□□□□□ -1.7
MACF1-231	ENST00000564288	HAUS6	Q7Z4H7	955 aa		4.44	□□□□□ -1.7
MACF1-231	ENST00000564288	REXO1	Q8N1G1	1221 aa	Known RBP	4.44	□□□□□ -1.7
MACF1-231	ENST00000564288	PTCD3	Q96EY7	689 aa	Known RBP	4.44	□□□□□ -1.7
MACF1-231	ENST00000564288	CDH19	Q9H159	772 aa		4.44	□□□□□ -1.7
MACF1-231	ENST00000564288	ENTPD5	O75356	428 aa		4.44	□□□□□ -1.7
MACF1-231	ENST00000564288	IL32	P24001	234 aa		4.44	□□□□□ -1.7
MACF1-231	ENST00000564288	IFNA8	P32881	189 aa		4.44	□□□□□ -1.7
MACF1-231	ENST00000564288	PIK3CA	P42336	1068 aa		4.44	□□□□□ -1.7
MACF1-231	ENST00000564288	COBLL1	Q53SF7	1204 aa		4.44	□□□□□ -1.7
MACF1-231	ENST00000564288	EAPP	Q56P03	285 aa	Predicted RBP	4.44	□□□□□ -1.7
MACF1-231	ENST00000564288	TTI2	Q6NXR4	508 aa		4.44	□□□□□ -1.7
MACF1-231	ENST00000564288	PQLC1	Q8N2U9	271 aa		4.44	□□□□□ -1.7
MACF1-231	ENST00000564288	AADAT	Q8N5Z0	425 aa		4.44	□□□□□ -1.7
MACF1-231	ENST00000564288	C9orf16	Q9BUW7	83 aa		4.44	□□□□□ -1.7
MACF1-231	ENST00000564288	GLS2	Q9UI32	602 aa		4.44	□□□□□ -1.7
MACF1-231	ENST00000564288	GGT7	Q9UJ14	662 aa		4.44	□□□□□ -1.7
MACF1-231	ENST00000564288	KIAA1024	Q9UPX6	916 aa		4.44	□□□□□ -1.7
MACF1-231	ENST00000564288		H0YGN5	161 aa		4.44	□□□□□ -1.7
MACF1-231	ENST00000564288	COPZ1	P61923	177 aa		4.44	□□□□□ -1.7
MACF1-231	ENST00000564288	KHDRBS1	Q07666	443 aa	Known RBP eCLIP	4.44	□□□□□ -1.7
MACF1-231	ENST00000564288	SLC26A11	Q86WA9	606 aa		4.44	□□□□□ -1.7
MACF1-231	ENST00000564288	TCAIM	Q8N3R3	496 aa		4.44	□□□□□ -1.7

Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms