RNA–Protein interactions for RNA: ENST00000564272.1

SHCBP1-203, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 530 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-203ENST00000564272 DCP1BQ8IZD4 617 aaKnown RBP21.47■■□□□ 1.03
SHCBP1-203ENST00000564272 PSMG2Q969U7 264 aa21.47■■□□□ 1.03
SHCBP1-203ENST00000564272 ELSPBP1Q96BH3 223 aa21.47■■□□□ 1.03
SHCBP1-203ENST00000564272 CCDC127Q96BQ5 260 aa21.47■■□□□ 1.03
SHCBP1-203ENST00000564272 ASB16Q96NS5 453 aa21.47■■□□□ 1.03
SHCBP1-203ENST00000564272 CGRRF1Q99675 332 aa21.47■■□□□ 1.03
SHCBP1-203ENST00000564272 DDX43Q9NXZ2 648 aaKnown RBP21.47■■□□□ 1.03
SHCBP1-203ENST00000564272 HSFX1Q9UBD0 423 aa21.47■■□□□ 1.03
SHCBP1-203ENST00000564272 HCRTO43612 131 aa21.46■■□□□ 1.03
SHCBP1-203ENST00000564272 TSPY1Q01534 308 aa21.46■■□□□ 1.03
SHCBP1-203ENST00000564272 SNW1Q13573 536 aaKnown RBP21.46■■□□□ 1.03
SHCBP1-203ENST00000564272 GRM2Q14416 872 aa21.46■■□□□ 1.03
SHCBP1-203ENST00000564272 CCDC142Q17RM4 750 aa21.46■■□□□ 1.03
SHCBP1-203ENST00000564272 STXBP5Q5T5C0 1151 aa21.46■■□□□ 1.03
SHCBP1-203ENST00000564272 DNAJB7Q7Z6W7 309 aaPredicted RBP21.46■■□□□ 1.03
SHCBP1-203ENST00000564272 C12orf56Q8IXR9 622 aa21.46■■□□□ 1.03
SHCBP1-203ENST00000564272 ADGRF2Q8IZF7 708 aa21.46■■□□□ 1.03
SHCBP1-203ENST00000564272 TMEM86AQ8N2M4 240 aa21.46■■□□□ 1.03
SHCBP1-203ENST00000564272 TOP6BLQ8N6T0 577 aa21.46■■□□□ 1.03
SHCBP1-203ENST00000564272 ZSCAN18Q8TBC5 510 aaPredicted RBP21.46■■□□□ 1.03
SHCBP1-203ENST00000564272 FAM200AQ8TCP9 573 aa21.46■■□□□ 1.03
SHCBP1-203ENST00000564272 SPPL2BQ8TCT7 592 aa21.46■■□□□ 1.03
SHCBP1-203ENST00000564272 C2orf15Q8WU43 125 aaKnown RBP21.46■■□□□ 1.03
SHCBP1-203ENST00000564272 HPDLQ96IR7 371 aa21.46■■□□□ 1.03
SHCBP1-203ENST00000564272 GZF1Q9H116 711 aaPredicted RBP21.46■■□□□ 1.03
SHCBP1-203ENST00000564272 SLITRK6Q9H5Y7 841 aa21.46■■□□□ 1.03
SHCBP1-203ENST00000564272 ZFP14Q9HCL3 533 aa21.46■■□□□ 1.03
SHCBP1-203ENST00000564272 FAM86C1Q9NVL1 165 aa21.46■■□□□ 1.03
SHCBP1-203ENST00000564272 CGNQ9P2M7 1197 aaKnown RBP21.46■■□□□ 1.03
SHCBP1-203ENST00000564272 R3HCC1Q9Y3T6 440 aaKnown RBP21.46■■□□□ 1.03
SHCBP1-203ENST00000564272 ASB3Q9Y575 518 aa21.46■■□□□ 1.03
SHCBP1-203ENST00000564272 CACNA1HO95180 2353 aa21.46■■□□□ 1.03
SHCBP1-203ENST00000564272 A0A1W2PQ27 194 aa21.45■■□□□ 1.02
SHCBP1-203ENST00000564272 A0A1W2PQ64 194 aa21.45■■□□□ 1.02
SHCBP1-203ENST00000564272 A0A1W2PQD8 194 aa21.45■■□□□ 1.02
SHCBP1-203ENST00000564272 H0Y858 1186 aa21.45■■□□□ 1.02
SHCBP1-203ENST00000564272 RPN1P04843 607 aaKnown RBP21.45■■□□□ 1.02
SHCBP1-203ENST00000564272 HAPLN1P10915 354 aaPredicted RBP21.45■■□□□ 1.02
SHCBP1-203ENST00000564272 TNNI1P19237 187 aa21.45■■□□□ 1.02
SHCBP1-203ENST00000564272 TUFMP49411 452 aaKnown RBP21.45■■□□□ 1.02
SHCBP1-203ENST00000564272 SMARCB1Q12824 385 aa21.45■■□□□ 1.02
SHCBP1-203ENST00000564272 MYO1EQ12965 1108 aa21.45■■□□□ 1.02
SHCBP1-203ENST00000564272 SOWAHAQ2M3V2 549 aa21.45■■□□□ 1.02
SHCBP1-203ENST00000564272 GAREM2Q75VX8 874 aa21.45■■□□□ 1.02
SHCBP1-203ENST00000564272 TRAPPC11Q7Z392 1133 aa21.45■■□□□ 1.02
SHCBP1-203ENST00000564272 ITIH5Q86UX2 942 aa21.45■■□□□ 1.02
SHCBP1-203ENST00000564272 SMARCD2Q92925 531 aa21.45■■□□□ 1.02
SHCBP1-203ENST00000564272 FNBP1Q96RU3 617 aa21.45■■□□□ 1.02
SHCBP1-203ENST00000564272 FOXQ1Q9C009 403 aa21.45■■□□□ 1.02
SHCBP1-203ENST00000564272 NCANO14594 1321 aa21.45■■□□□ 1.02
SHCBP1-203ENST00000564272 EXOC3O60645 756 aa21.44■■□□□ 1.02
SHCBP1-203ENST00000564272 MYL1P05976 194 aa21.44■■□□□ 1.02
SHCBP1-203ENST00000564272 VIPR2P41587 438 aa21.44■■□□□ 1.02
SHCBP1-203ENST00000564272 MYL7Q01449 175 aa21.44■■□□□ 1.02
SHCBP1-203ENST00000564272 VEPH1Q14D04 833 aa21.44■■□□□ 1.02
SHCBP1-203ENST00000564272 MLF2Q15773 248 aaPredicted RBP21.44■■□□□ 1.02
SHCBP1-203ENST00000564272 INTS6LQ5JSJ4 861 aaKnown RBP21.44■■□□□ 1.02
SHCBP1-203ENST00000564272 PHLDB3Q6NSJ2 640 aa21.44■■□□□ 1.02
SHCBP1-203ENST00000564272 ALYREFQ86V81 257 aaKnown RBP21.44■■□□□ 1.02
SHCBP1-203ENST00000564272 GIPC2Q8TF65 315 aa21.44■■□□□ 1.02
SHCBP1-203ENST00000564272 PKMYT1Q99640 499 aa21.44■■□□□ 1.02
SHCBP1-203ENST00000564272 ACBD6Q9BR61 282 aa21.44■■□□□ 1.02
SHCBP1-203ENST00000564272 PI4K2AQ9BTU6 479 aa21.44■■□□□ 1.02
SHCBP1-203ENST00000564272 PCDHB5Q9Y5E4 795 aa21.44■■□□□ 1.02
SHCBP1-203ENST00000564272 GABRR2P28476 465 aa21.43■■□□□ 1.02
SHCBP1-203ENST00000564272 CASP4P49662 377 aa21.43■■□□□ 1.02
SHCBP1-203ENST00000564272 GPR15P49685 360 aa21.43■■□□□ 1.02
SHCBP1-203ENST00000564272 PFKPQ01813 784 aa21.43■■□□□ 1.02
SHCBP1-203ENST00000564272 PSMD2Q13200 908 aa21.43■■□□□ 1.02
SHCBP1-203ENST00000564272 SLC44A4Q53GD3 710 aa21.43■■□□□ 1.02
SHCBP1-203ENST00000564272 VITQ6UXI7 678 aa21.43■■□□□ 1.02
SHCBP1-203ENST00000564272 KRBA2Q6ZNG9 492 aa21.43■■□□□ 1.02
SHCBP1-203ENST00000564272 LIMS2Q7Z4I7 341 aa21.43■■□□□ 1.02
SHCBP1-203ENST00000564272 CCDC105Q8IYK2 499 aa21.43■■□□□ 1.02
SHCBP1-203ENST00000564272 STKLD1Q8NE28 680 aa21.43■■□□□ 1.02
SHCBP1-203ENST00000564272 GOLGA5Q8TBA6 731 aa21.43■■□□□ 1.02
SHCBP1-203ENST00000564272 PLEKHO2Q8TD55 490 aa21.43■■□□□ 1.02
SHCBP1-203ENST00000564272 KBTBD7Q8WVZ9 684 aa21.43■■□□□ 1.02
SHCBP1-203ENST00000564272 ZNF516Q92618 1163 aa21.43■■□□□ 1.02
SHCBP1-203ENST00000564272 ATOH1Q92858 354 aaPredicted RBP21.43■■□□□ 1.02
SHCBP1-203ENST00000564272 KCTD10Q9H3F6 313 aa21.43■■□□□ 1.02
SHCBP1-203ENST00000564272 GABRDO14764 452 aa21.42■■□□□ 1.02
SHCBP1-203ENST00000564272 PRPF40AO75400 957 aaKnown RBP21.42■■□□□ 1.02
SHCBP1-203ENST00000564272 DCNP07585 359 aaKnown RBP21.42■■□□□ 1.02
SHCBP1-203ENST00000564272 LHX1P48742 406 aa21.42■■□□□ 1.02
SHCBP1-203ENST00000564272 STARD6P59095 220 aa21.42■■□□□ 1.02
SHCBP1-203ENST00000564272 CYP4F8P98187 520 aa21.42■■□□□ 1.02
SHCBP1-203ENST00000564272 DPYDQ12882 1025 aa21.42■■□□□ 1.02
SHCBP1-203ENST00000564272 NFE2Q16621 373 aaPredicted RBP21.42■■□□□ 1.02
SHCBP1-203ENST00000564272 GPIHBP1Q8IV16 184 aa21.42■■□□□ 1.02
SHCBP1-203ENST00000564272 DTWD2Q8NBA8 298 aa21.42■■□□□ 1.02
SHCBP1-203ENST00000564272 SPATA18Q8TC71 538 aa21.42■■□□□ 1.02
SHCBP1-203ENST00000564272 MKNK1Q9BUB5 465 aa21.42■■□□□ 1.02
SHCBP1-203ENST00000564272 ATXN3LQ9H3M9 355 aa21.42■■□□□ 1.02
SHCBP1-203ENST00000564272 IL21Q9HBE4 155 aa21.42■■□□□ 1.02
SHCBP1-203ENST00000564272 GTF3C4Q9UKN8 822 aa21.42■■□□□ 1.02
SHCBP1-203ENST00000564272 PIEZO1Q92508 2521 aa21.42■■□□□ 1.02
SHCBP1-203ENST00000564272 LRRN2O75325 713 aa21.41■■□□□ 1.02
SHCBP1-203ENST00000564272 CST3P01034 146 aaPredicted RBP21.41■■□□□ 1.02
SHCBP1-203ENST00000564272 PCSK1P29120 753 aa21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms