RNA–Protein interactions for RNA: ENST00000563984.1

VPS35-205, Transcript of VPS35, retromer complex component, humanhuman

TSL 2

Gene VPS35, Length 775 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS35-205ENST00000563984 SCNN1GP51170 649 aa5.63□□□□□ -1.51
VPS35-205ENST00000563984 LGALS4P56470 323 aa5.63□□□□□ -1.51
VPS35-205ENST00000563984 HSD17B7P56937 341 aa5.63□□□□□ -1.51
VPS35-205ENST00000563984 DUSP2Q05923 314 aa5.63□□□□□ -1.51
VPS35-205ENST00000563984 IKQ13123 557 aaPredicted RBP5.63□□□□□ -1.51
VPS35-205ENST00000563984 TUBA3CQ13748 450 aa5.63□□□□□ -1.51
VPS35-205ENST00000563984 C19orf54Q5BKX5 351 aa5.63□□□□□ -1.51
VPS35-205ENST00000563984 RILPL1Q5EBL4 403 aa5.63□□□□□ -1.51
VPS35-205ENST00000563984 CT83Q5H943 113 aa5.63□□□□□ -1.51
VPS35-205ENST00000563984 METTL24Q5JXM2 366 aa5.63□□□□□ -1.51
VPS35-205ENST00000563984 SLC10A5Q5PT55 438 aa5.63□□□□□ -1.51
VPS35-205ENST00000563984 SWSAP1Q6NVH7 229 aa5.63□□□□□ -1.51
VPS35-205ENST00000563984 HIBCHQ6NVY1 386 aaPredicted RBP5.63□□□□□ -1.51
VPS35-205ENST00000563984 TUBA3EQ6PEY2 450 aa5.63□□□□□ -1.51
VPS35-205ENST00000563984 SLC4A10Q6U841 1118 aa5.63□□□□□ -1.51
VPS35-205ENST00000563984 LEKR1Q6ZMV7 388 aa5.63□□□□□ -1.51
VPS35-205ENST00000563984 OR5M3Q8NGP4 307 aa5.63□□□□□ -1.51
VPS35-205ENST00000563984 GOLGA5Q8TBA6 731 aa5.63□□□□□ -1.51
VPS35-205ENST00000563984 ATXN2LQ8WWM7 1075 aaKnown RBP5.63□□□□□ -1.51
VPS35-205ENST00000563984 IPCEF1Q8WWN9 437 aaPredicted RBP5.63□□□□□ -1.51
VPS35-205ENST00000563984 EAF2Q96CJ1 260 aaPredicted RBP5.63□□□□□ -1.51
VPS35-205ENST00000563984 LRRC45Q96CN5 670 aa5.63□□□□□ -1.51
VPS35-205ENST00000563984 RAX2Q96IS3 184 aa5.63□□□□□ -1.51
VPS35-205ENST00000563984 EPSTI1Q96J88 318 aa5.63□□□□□ -1.51
VPS35-205ENST00000563984 PDCD2LQ9BRP1 358 aa5.63□□□□□ -1.51
VPS35-205ENST00000563984 MRPL9Q9BYD2 267 aaKnown RBP5.63□□□□□ -1.51
VPS35-205ENST00000563984 VCX3BQ9H321 246 aa5.63□□□□□ -1.51
VPS35-205ENST00000563984 KCTD10Q9H3F6 313 aa5.63□□□□□ -1.51
VPS35-205ENST00000563984 RABEP2Q9H5N1 569 aa5.63□□□□□ -1.51
VPS35-205ENST00000563984 DDX21Q9NR30 783 aaKnown RBP eCLIP5.63□□□□□ -1.51
VPS35-205ENST00000563984 UBAP1Q9NZ09 502 aa5.63□□□□□ -1.51
VPS35-205ENST00000563984 C9orf78Q9NZ63 289 aaPredicted RBP5.63□□□□□ -1.51
VPS35-205ENST00000563984 PA2G4Q9UQ80 394 aaKnown RBP5.63□□□□□ -1.51
VPS35-205ENST00000563984 TRAF3IP3Q9Y228 551 aa5.63□□□□□ -1.51
VPS35-205ENST00000563984 MRPL11Q9Y3B7 192 aaKnown RBP5.63□□□□□ -1.51
VPS35-205ENST00000563984 JRKLQ9Y4A0 524 aa5.63□□□□□ -1.51
VPS35-205ENST00000563984 TRIM17Q9Y577 477 aa5.63□□□□□ -1.51
VPS35-205ENST00000563984 XDHP47989 1333 aa5.63□□□□□ -1.51
VPS35-205ENST00000563984 KANK1Q14678 1352 aa5.63□□□□□ -1.51
VPS35-205ENST00000563984 DHX29Q7Z478 1369 aaKnown RBP5.63□□□□□ -1.51
VPS35-205ENST00000563984 A6NCN8 305 aa5.62□□□□□ -1.51
VPS35-205ENST00000563984 H0YC42 278 aa5.62□□□□□ -1.51
VPS35-205ENST00000563984 GOLGA6L19H0YKK7 550 aa5.62□□□□□ -1.51
VPS35-205ENST00000563984 CASQ2O14958 399 aaPredicted RBP5.62□□□□□ -1.51
VPS35-205ENST00000563984 ZBED4O75132 1171 aa5.62□□□□□ -1.51
VPS35-205ENST00000563984 LPLP06858 475 aa5.62□□□□□ -1.51
VPS35-205ENST00000563984 SFTPCP11686 197 aa5.62□□□□□ -1.51
VPS35-205ENST00000563984 KRT10P13645 584 aa5.62□□□□□ -1.51
VPS35-205ENST00000563984 GYPEP15421 78 aa5.62□□□□□ -1.51
VPS35-205ENST00000563984 DESP17661 470 aa5.62□□□□□ -1.51
VPS35-205ENST00000563984 CYP11B2P19099 503 aa5.62□□□□□ -1.51
VPS35-205ENST00000563984 CASRP41180 1078 aa5.62□□□□□ -1.51
VPS35-205ENST00000563984 GZMKP49863 264 aa5.62□□□□□ -1.51
VPS35-205ENST00000563984 MXI1P50539 228 aa5.62□□□□□ -1.51
VPS35-205ENST00000563984 RABGGTBP53611 331 aa5.62□□□□□ -1.51
VPS35-205ENST00000563984 EPHB1P54762 984 aa5.62□□□□□ -1.51
VPS35-205ENST00000563984 MRPS35P82673 323 aaKnown RBP5.62□□□□□ -1.51
VPS35-205ENST00000563984 ROR1Q01973 937 aa5.62□□□□□ -1.51
VPS35-205ENST00000563984 MRPL49Q13405 166 aaKnown RBP5.62□□□□□ -1.51
VPS35-205ENST00000563984 UBE3CQ15386 1083 aa5.62□□□□□ -1.51
VPS35-205ENST00000563984 CLPPQ16740 277 aaPredicted RBP5.62□□□□□ -1.51
VPS35-205ENST00000563984 TBC1D25Q3MII6 688 aa5.62□□□□□ -1.51
VPS35-205ENST00000563984 BOLA3Q53S33 107 aa5.62□□□□□ -1.51
VPS35-205ENST00000563984 DCAF17Q5H9S7 520 aaPredicted RBP5.62□□□□□ -1.51
VPS35-205ENST00000563984 RRP12Q5JTH9 1297 aaKnown RBP5.62□□□□□ -1.51
VPS35-205ENST00000563984 FAM83BQ5T0W9 1011 aa5.62□□□□□ -1.51
VPS35-205ENST00000563984 NAIF1Q69YI7 327 aaPredicted RBP5.62□□□□□ -1.51
VPS35-205ENST00000563984 IQSEC1Q6DN90 963 aa5.62□□□□□ -1.51
VPS35-205ENST00000563984 OLFML1Q6UWY5 402 aa5.62□□□□□ -1.51
VPS35-205ENST00000563984 CCDC129Q6ZRS4 1044 aa5.62□□□□□ -1.51
VPS35-205ENST00000563984 MAATS1Q7Z4T9 603 aa5.62□□□□□ -1.51
VPS35-205ENST00000563984 TMEM110Q86TL2 294 aa5.62□□□□□ -1.51
VPS35-205ENST00000563984 GBP7Q8N8V2 638 aaPredicted RBP5.62□□□□□ -1.51
VPS35-205ENST00000563984 ATP11CQ8NB49 1132 aa5.62□□□□□ -1.51
VPS35-205ENST00000563984 ACMSDQ8TDX5 336 aa5.62□□□□□ -1.51
VPS35-205ENST00000563984 DNAAF4Q8WXU2 420 aa5.62□□□□□ -1.51
VPS35-205ENST00000563984 JAKMIP2Q96AA8 810 aa5.62□□□□□ -1.51
VPS35-205ENST00000563984 TBATAQ96M53 351 aa5.62□□□□□ -1.51
VPS35-205ENST00000563984 MNTQ99583 582 aa5.62□□□□□ -1.51
VPS35-205ENST00000563984 GPR87Q9BY21 358 aa5.62□□□□□ -1.51
VPS35-205ENST00000563984 PRDM12Q9H4Q4 367 aa5.62□□□□□ -1.51
VPS35-205ENST00000563984 SPATS2LQ9NUQ6 558 aaKnown RBP5.62□□□□□ -1.51
VPS35-205ENST00000563984 IL20Q9NYY1 176 aa5.62□□□□□ -1.51
VPS35-205ENST00000563984 AIPL1Q9NZN9 384 aa5.62□□□□□ -1.51
VPS35-205ENST00000563984 CFDP1Q9UEE9 299 aaPredicted RBP5.62□□□□□ -1.51
VPS35-205ENST00000563984 ITGB1BP2Q9UKP3 347 aa5.62□□□□□ -1.51
VPS35-205ENST00000563984 PNMA8BQ9ULN7 279 aaPredicted RBP5.62□□□□□ -1.51
VPS35-205ENST00000563984 MAGED1Q9Y5V3 778 aaPredicted RBP5.62□□□□□ -1.51
VPS35-205ENST00000563984 EVC2Q86UK5 1308 aa5.62□□□□□ -1.51
VPS35-205ENST00000563984 KLRG2A4D1S0 409 aaPredicted RBP5.61□□□□□ -1.51
VPS35-205ENST00000563984 ZSCAN9O15535 394 aaPredicted RBP5.61□□□□□ -1.51
VPS35-205ENST00000563984 NARSO43776 548 aaKnown RBP5.61□□□□□ -1.51
VPS35-205ENST00000563984 STC2O76061 302 aa5.61□□□□□ -1.51
VPS35-205ENST00000563984 STAMBPO95630 424 aa5.61□□□□□ -1.51
VPS35-205ENST00000563984 EYA4O95677 639 aa5.61□□□□□ -1.51
VPS35-205ENST00000563984 BAG2O95816 211 aa5.61□□□□□ -1.51
VPS35-205ENST00000563984 GLULP15104 373 aa5.61□□□□□ -1.51
VPS35-205ENST00000563984 S100A5P33763 92 aa5.61□□□□□ -1.51
VPS35-205ENST00000563984 CTNNA1P35221 906 aaKnown RBP5.61□□□□□ -1.51
VPS35-205ENST00000563984 GNL1P36915 607 aaPredicted RBP5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms