RNA–Protein interactions for RNA: ENST00000563623.5

ABCA3-203, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 1 (best)

Gene ABCA3, Length 3,649 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-203ENST00000563623 LPXNO60711 386 aa12.43□□□□□ -0.42
ABCA3-203ENST00000563623 TPBGLP0DKB5 382 aa12.43□□□□□ -0.42
ABCA3-203ENST00000563623 PTPN4P29074 926 aa12.43□□□□□ -0.42
ABCA3-203ENST00000563623 GTF2H1P32780 548 aa12.43□□□□□ -0.42
ABCA3-203ENST00000563623 IRX4P78413 519 aa12.43□□□□□ -0.42
ABCA3-203ENST00000563623 GCNT1Q02742 428 aa12.43□□□□□ -0.42
ABCA3-203ENST00000563623 TXNRD3NBQ6F5E7 133 aa12.43□□□□□ -0.42
ABCA3-203ENST00000563623 RFX6Q8HWS3 928 aa12.43□□□□□ -0.42
ABCA3-203ENST00000563623 CNKSR1Q969H4 720 aa12.43□□□□□ -0.42
ABCA3-203ENST00000563623 FAM111AQ96PZ2 611 aa12.43□□□□□ -0.42
ABCA3-203ENST00000563623 CYTH2Q99418 400 aa12.43□□□□□ -0.42
ABCA3-203ENST00000563623 PAFAH2Q99487 392 aa12.43□□□□□ -0.42
ABCA3-203ENST00000563623 MSTO1Q9BUK6 570 aa12.43□□□□□ -0.42
ABCA3-203ENST00000563623 TSSK1BQ9BXA7 367 aa12.43□□□□□ -0.42
ABCA3-203ENST00000563623 FBXO6Q9NRD1 293 aaPredicted RBP12.43□□□□□ -0.42
ABCA3-203ENST00000563623 ARMCX1Q9P291 453 aa12.43□□□□□ -0.42
ABCA3-203ENST00000563623 STOML1Q9UBI4 398 aa12.43□□□□□ -0.42
ABCA3-203ENST00000563623 COL5A3P25940 1745 aaPredicted RBP12.43□□□□□ -0.42
ABCA3-203ENST00000563623 UMODL1Q5DID0 1318 aa12.43□□□□□ -0.42
ABCA3-203ENST00000563623 ATAD5Q96QE3 1844 aa12.43□□□□□ -0.42
ABCA3-203ENST00000563623 DHX15O43143 795 aaKnown RBP12.43□□□□□ -0.42
ABCA3-203ENST00000563623 CCNE2O96020 404 aa12.43□□□□□ -0.42
ABCA3-203ENST00000563623 INHBAP08476 426 aa12.43□□□□□ -0.42
ABCA3-203ENST00000563623 YY1P25490 414 aa12.43□□□□□ -0.42
ABCA3-203ENST00000563623 SKIV2L2P42285 1042 aaKnown RBP12.43□□□□□ -0.42
ABCA3-203ENST00000563623 GEMIN4P57678 1058 aaKnown RBP12.43□□□□□ -0.42
ABCA3-203ENST00000563623 KLC1Q07866 573 aa12.43□□□□□ -0.42
ABCA3-203ENST00000563623 CUL2Q13617 745 aa12.43□□□□□ -0.42
ABCA3-203ENST00000563623 EAPPQ56P03 285 aaPredicted RBP12.43□□□□□ -0.42
ABCA3-203ENST00000563623 MFSD4BQ5TF39 518 aa12.43□□□□□ -0.42
ABCA3-203ENST00000563623 SPOCD1Q6ZMY3 1216 aa12.43□□□□□ -0.42
ABCA3-203ENST00000563623 KATNAL2Q8IYT4 538 aa12.43□□□□□ -0.42
ABCA3-203ENST00000563623 ABRAQ8N0Z2 381 aa12.43□□□□□ -0.42
ABCA3-203ENST00000563623 NLGN1Q8N2Q7 840 aa12.43□□□□□ -0.42
ABCA3-203ENST00000563623 ZNF516Q92618 1163 aa12.43□□□□□ -0.42
ABCA3-203ENST00000563623 CFAP36Q96G28 342 aa12.43□□□□□ -0.42
ABCA3-203ENST00000563623 MANSC1Q9H8J5 431 aa12.43□□□□□ -0.42
ABCA3-203ENST00000563623 SENP1Q9P0U3 644 aa12.43□□□□□ -0.42
ABCA3-203ENST00000563623 MARCOQ9UEW3 520 aaPredicted RBP12.43□□□□□ -0.42
ABCA3-203ENST00000563623 ACTL7BQ9Y614 415 aa12.43□□□□□ -0.42
ABCA3-203ENST00000563623 CAPN9O14815 690 aa12.43□□□□□ -0.42
ABCA3-203ENST00000563623 KRT36O76013 467 aa12.43□□□□□ -0.42
ABCA3-203ENST00000563623 GM2AP17900 193 aa12.43□□□□□ -0.42
ABCA3-203ENST00000563623 PSMA2P25787 234 aa12.43□□□□□ -0.42
ABCA3-203ENST00000563623 SERPINB3P29508 390 aa12.43□□□□□ -0.42
ABCA3-203ENST00000563623 NCKAP1LP55160 1127 aa12.43□□□□□ -0.42
ABCA3-203ENST00000563623 ACVR2BQ13705 512 aa12.43□□□□□ -0.42
ABCA3-203ENST00000563623 SLC39A4Q6P5W5 647 aa12.43□□□□□ -0.42
ABCA3-203ENST00000563623 ANO5Q75V66 913 aa12.43□□□□□ -0.42
ABCA3-203ENST00000563623 ATP11CQ8NB49 1132 aa12.43□□□□□ -0.42
ABCA3-203ENST00000563623 FBXO36Q8NEA4 188 aa12.43□□□□□ -0.42
ABCA3-203ENST00000563623 CFAP61Q8NHU2 1237 aa12.43□□□□□ -0.42
ABCA3-203ENST00000563623 SYTL5Q8TDW5 730 aaPredicted RBP12.43□□□□□ -0.42
ABCA3-203ENST00000563623 FAM161BQ96MY7 647 aa12.43□□□□□ -0.42
ABCA3-203ENST00000563623 VCXQ9H320 206 aa12.43□□□□□ -0.42
ABCA3-203ENST00000563623 CST8O60676 142 aa12.42□□□□□ -0.42
ABCA3-203ENST00000563623 TCEA3O75764 348 aa12.42□□□□□ -0.42
ABCA3-203ENST00000563623 JAK3P52333 1124 aa12.42□□□□□ -0.42
ABCA3-203ENST00000563623 NOMO3P69849 1222 aa12.42□□□□□ -0.42
ABCA3-203ENST00000563623 USP4Q13107 963 aa12.42□□□□□ -0.42
ABCA3-203ENST00000563623 KPNB1Q14974 876 aaKnown RBP12.42□□□□□ -0.42
ABCA3-203ENST00000563623 PARP6Q2NL67 630 aa12.42□□□□□ -0.42
ABCA3-203ENST00000563623 KHDC1Q4VXA5 237 aaKnown RBP12.42□□□□□ -0.42
ABCA3-203ENST00000563623 TDRD10Q5VZ19 366 aaKnown RBP12.42□□□□□ -0.42
ABCA3-203ENST00000563623 C4orf19Q8IY42 314 aa12.42□□□□□ -0.42
ABCA3-203ENST00000563623 PDIK1LQ8N165 341 aa12.42□□□□□ -0.42
ABCA3-203ENST00000563623 HSPH1Q92598 858 aa12.42□□□□□ -0.42
ABCA3-203ENST00000563623 ZNF668Q96K58 619 aaPredicted RBP12.42□□□□□ -0.42
ABCA3-203ENST00000563623 RILPQ96NA2 401 aa12.42□□□□□ -0.42
ABCA3-203ENST00000563623 TARS2Q9BW92 718 aaKnown RBP12.42□□□□□ -0.42
ABCA3-203ENST00000563623 ARL8BQ9NVJ2 186 aa12.42□□□□□ -0.42
ABCA3-203ENST00000563623 PPARGC1AQ9UBK2 798 aaKnown RBP12.42□□□□□ -0.42
ABCA3-203ENST00000563623 PCDHA10Q9Y5I2 948 aa12.42□□□□□ -0.42
ABCA3-203ENST00000563623 K7ERI5 159 aa12.42□□□□□ -0.42
ABCA3-203ENST00000563623 STAM2O75886 525 aa12.42□□□□□ -0.42
ABCA3-203ENST00000563623 PYGLP06737 847 aa12.42□□□□□ -0.42
ABCA3-203ENST00000563623 ATP4AP20648 1035 aa12.42□□□□□ -0.42
ABCA3-203ENST00000563623 OSTNP61366 133 aa12.42□□□□□ -0.42
ABCA3-203ENST00000563623 DSTYKQ6XUX3 929 aa12.42□□□□□ -0.42
ABCA3-203ENST00000563623 MON1BQ7L1V2 547 aa12.42□□□□□ -0.42
ABCA3-203ENST00000563623 PPP1R14CQ8TAE6 165 aa12.42□□□□□ -0.42
ABCA3-203ENST00000563623 ACTL9Q8TC94 416 aa12.42□□□□□ -0.42
ABCA3-203ENST00000563623 C10orf82Q8WW14 230 aa12.42□□□□□ -0.42
ABCA3-203ENST00000563623 SLITRK1Q96PX8 696 aa12.42□□□□□ -0.42
ABCA3-203ENST00000563623 NXF1Q9UBU9 619 aaKnown RBP12.42□□□□□ -0.42
ABCA3-203ENST00000563623 CORO1CQ9ULV4 474 aaPredicted RBP12.42□□□□□ -0.42
ABCA3-203ENST00000563623 COQ4Q9Y3A0 265 aa12.42□□□□□ -0.42
ABCA3-203ENST00000563623 CCDC22O60826 627 aa12.42□□□□□ -0.42
ABCA3-203ENST00000563623 ICAM1P05362 532 aa12.42□□□□□ -0.42
ABCA3-203ENST00000563623 WEE2P0C1S8 567 aa12.42□□□□□ -0.42
ABCA3-203ENST00000563623 BGNP21810 368 aa12.42□□□□□ -0.42
ABCA3-203ENST00000563623 KLRC2P26717 231 aa12.42□□□□□ -0.42
ABCA3-203ENST00000563623 CAP2P40123 477 aa12.42□□□□□ -0.42
ABCA3-203ENST00000563623 RFC5P40937 340 aa12.42□□□□□ -0.42
ABCA3-203ENST00000563623 KRT76Q01546 638 aa12.42□□□□□ -0.42
ABCA3-203ENST00000563623 OTUD4Q01804 1114 aaKnown RBP12.42□□□□□ -0.42
ABCA3-203ENST00000563623 SMAD1Q15797 465 aaKnown RBP12.42□□□□□ -0.42
ABCA3-203ENST00000563623 C11orf91Q3C1V1 193 aa12.42□□□□□ -0.42
ABCA3-203ENST00000563623 ANKRD22Q5VYY1 191 aa12.42□□□□□ -0.42
ABCA3-203ENST00000563623 KLHL23Q8NBE8 558 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms