RNA–Protein interactions for RNA: ENST00000563290.5

SCAPER-207, Transcript of S-phase cyclin A associated protein in the ER, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SCAPER, Length 5,028 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPER-207ENST00000563290 SCN4BQ8IWT1 228 aa6.29□□□□□ -1.4
SCAPER-207ENST00000563290 ARRDC4Q8NCT1 418 aa6.29□□□□□ -1.4
SCAPER-207ENST00000563290 CCNYQ8ND76 341 aa6.29□□□□□ -1.4
SCAPER-207ENST00000563290 SMC1BQ8NDV3 1235 aa6.29□□□□□ -1.4
SCAPER-207ENST00000563290 REPS2Q8NFH8 660 aa6.29□□□□□ -1.4
SCAPER-207ENST00000563290 KCNV2Q8TDN2 545 aa6.29□□□□□ -1.4
SCAPER-207ENST00000563290 KLHL29Q96CT2 875 aa6.29□□□□□ -1.4
SCAPER-207ENST00000563290 PGM2Q96G03 612 aa6.29□□□□□ -1.4
SCAPER-207ENST00000563290 WNK4Q96J92 1243 aa6.29□□□□□ -1.4
SCAPER-207ENST00000563290 CLMNQ96JQ2 1002 aa6.29□□□□□ -1.4
SCAPER-207ENST00000563290 TRIM4Q9C037 500 aa6.29□□□□□ -1.4
SCAPER-207ENST00000563290 ZWILCHQ9H900 591 aa6.29□□□□□ -1.4
SCAPER-207ENST00000563290 UVRAGQ9P2Y5 699 aa6.29□□□□□ -1.4
SCAPER-207ENST00000563290 CTNNAL1Q9UBT7 734 aa6.29□□□□□ -1.4
SCAPER-207ENST00000563290 CCDC88AQ3V6T2 1871 aa6.29□□□□□ -1.4
SCAPER-207ENST00000563290 PLCH1Q4KWH8 1693 aa6.29□□□□□ -1.4
SCAPER-207ENST00000563290 ARAP2Q8WZ64 1704 aa6.29□□□□□ -1.4
SCAPER-207ENST00000563290 EIF4E1BA6NMX2 242 aaKnown RBP6.29□□□□□ -1.4
SCAPER-207ENST00000563290 SKIP12755 728 aa6.29□□□□□ -1.4
SCAPER-207ENST00000563290 RANBP1P43487 201 aa6.29□□□□□ -1.4
SCAPER-207ENST00000563290 CASP4P49662 377 aa6.29□□□□□ -1.4
SCAPER-207ENST00000563290 GALCP54803 685 aa6.29□□□□□ -1.4
SCAPER-207ENST00000563290 DR1Q01658 176 aa6.29□□□□□ -1.4
SCAPER-207ENST00000563290 DHX9Q08211 1270 aaKnown RBP6.29□□□□□ -1.4
SCAPER-207ENST00000563290 ITKQ08881 620 aa6.29□□□□□ -1.4
SCAPER-207ENST00000563290 ACVR2BQ13705 512 aa6.29□□□□□ -1.4
SCAPER-207ENST00000563290 CDO1Q16878 200 aa6.29□□□□□ -1.4
SCAPER-207ENST00000563290 ZNF677Q86XU0 584 aa6.29□□□□□ -1.4
SCAPER-207ENST00000563290 RBM12BQ8IXT5 1001 aaKnown RBP6.29□□□□□ -1.4
SCAPER-207ENST00000563290 KIF2BQ8N4N8 673 aa6.29□□□□□ -1.4
SCAPER-207ENST00000563290 APPL2Q8NEU8 664 aa6.29□□□□□ -1.4
SCAPER-207ENST00000563290 AP1M1Q9BXS5 423 aa6.29□□□□□ -1.4
SCAPER-207ENST00000563290 DNAJC18Q9H819 358 aa6.29□□□□□ -1.4
SCAPER-207ENST00000563290 SDAD1Q9NVU7 687 aaKnown RBP eCLIP6.29□□□□□ -1.4
SCAPER-207ENST00000563290 KLHL42Q9P2K6 505 aa6.29□□□□□ -1.4
SCAPER-207ENST00000563290 ANAPC5Q9UJX4 755 aa6.29□□□□□ -1.4
SCAPER-207ENST00000563290 CPSF3Q9UKF6 684 aaKnown RBP6.29□□□□□ -1.4
SCAPER-207ENST00000563290 STK38LQ9Y2H1 464 aa6.29□□□□□ -1.4
SCAPER-207ENST00000563290 COL18A1P39060 1754 aa6.29□□□□□ -1.4
SCAPER-207ENST00000563290 CICQ96RK0 1608 aaPredicted RBP6.29□□□□□ -1.4
SCAPER-207ENST00000563290 A0A1B0GVG6 124 aa6.28□□□□□ -1.4
SCAPER-207ENST00000563290 O00370 1275 aa6.28□□□□□ -1.4
SCAPER-207ENST00000563290 PODXLO00592 558 aa6.28□□□□□ -1.4
SCAPER-207ENST00000563290 PPP1R11O60927 126 aaPredicted RBP6.28□□□□□ -1.4
SCAPER-207ENST00000563290 ZC3H11AO75152 810 aaKnown RBP eCLIP6.28□□□□□ -1.4
SCAPER-207ENST00000563290 NUDT17P0C025 328 aa6.28□□□□□ -1.4
SCAPER-207ENST00000563290 ZBTB48P10074 688 aaPredicted RBP6.28□□□□□ -1.4
SCAPER-207ENST00000563290 AKR1A1P14550 325 aa6.28□□□□□ -1.4
SCAPER-207ENST00000563290 ACADSP16219 412 aa6.28□□□□□ -1.4
SCAPER-207ENST00000563290 ADORA2BP29275 332 aa6.28□□□□□ -1.4
SCAPER-207ENST00000563290 ARL1P40616 181 aaPredicted RBP6.28□□□□□ -1.4
SCAPER-207ENST00000563290 PLTPP55058 493 aa6.28□□□□□ -1.4
SCAPER-207ENST00000563290 LAMTOR4Q0VGL1 99 aa6.28□□□□□ -1.4
SCAPER-207ENST00000563290 CUL3Q13618 768 aa6.28□□□□□ -1.4
SCAPER-207ENST00000563290 HHATQ5VTY9 493 aa6.28□□□□□ -1.4
SCAPER-207ENST00000563290 FAM47EQ6ZV65 393 aa6.28□□□□□ -1.4
SCAPER-207ENST00000563290 RHOT1Q8IXI2 618 aa6.28□□□□□ -1.4
SCAPER-207ENST00000563290 ETNPPLQ8TBG4 499 aa6.28□□□□□ -1.4
SCAPER-207ENST00000563290 C18orf8Q96DM3 657 aa6.28□□□□□ -1.4
SCAPER-207ENST00000563290 TRAPPC9Q96Q05 1148 aa6.28□□□□□ -1.4
SCAPER-207ENST00000563290 SYT15Q9BQS2 421 aa6.28□□□□□ -1.4
SCAPER-207ENST00000563290 NKX1-2Q9UD57 310 aaPredicted RBP6.28□□□□□ -1.4
SCAPER-207ENST00000563290 UBQLN1Q9UMX0 589 aaKnown RBP6.28□□□□□ -1.4
SCAPER-207ENST00000563290 USP15Q9Y4E8 981 aaPredicted RBP6.28□□□□□ -1.4
SCAPER-207ENST00000563290 BTNL10A8MVZ5 291 aa6.28□□□□□ -1.4
SCAPER-207ENST00000563290 GPR182O15218 404 aa6.28□□□□□ -1.4
SCAPER-207ENST00000563290 AKAP3O75969 853 aa6.28□□□□□ -1.4
SCAPER-207ENST00000563290 SRGAP2BP0DMP2 458 aa6.28□□□□□ -1.4
SCAPER-207ENST00000563290 UBA1P22314 1058 aaKnown RBP6.28□□□□□ -1.4
SCAPER-207ENST00000563290 PON1P27169 355 aa6.28□□□□□ -1.4
SCAPER-207ENST00000563290 DNAJA1P31689 397 aaKnown RBP6.28□□□□□ -1.4
SCAPER-207ENST00000563290 PNPLA4P41247 253 aa6.28□□□□□ -1.4
SCAPER-207ENST00000563290 SLC1A1P43005 524 aa6.28□□□□□ -1.4
SCAPER-207ENST00000563290 DYNC1I2Q13409 638 aaKnown RBP6.28□□□□□ -1.4
SCAPER-207ENST00000563290 GLB1LQ6UWU2 654 aa6.28□□□□□ -1.4
SCAPER-207ENST00000563290 C1orf186Q6ZWK4 172 aa6.28□□□□□ -1.4
SCAPER-207ENST00000563290 TRIM59Q8IWR1 403 aa6.28□□□□□ -1.4
SCAPER-207ENST00000563290 C4orf32Q8N8J7 132 aa6.28□□□□□ -1.4
SCAPER-207ENST00000563290 FBF1Q8TES7 1133 aa6.28□□□□□ -1.4
SCAPER-207ENST00000563290 C7orf43Q8WVR3 580 aa6.28□□□□□ -1.4
SCAPER-207ENST00000563290 TRIM62Q9BVG3 475 aa6.28□□□□□ -1.4
SCAPER-207ENST00000563290 TRIM7Q9C029 511 aa6.28□□□□□ -1.4
SCAPER-207ENST00000563290 EPB41L4BQ9H329 900 aa6.28□□□□□ -1.4
SCAPER-207ENST00000563290 PCMTD2Q9NV79 361 aa6.28□□□□□ -1.4
SCAPER-207ENST00000563290 SLC4A7Q9Y6M7 1214 aa6.28□□□□□ -1.4
SCAPER-207ENST00000563290 CASZ1Q86V15 1759 aa6.28□□□□□ -1.4
SCAPER-207ENST00000563290 GTPBP10A4D1E9 387 aaKnown RBP6.28□□□□□ -1.4
SCAPER-207ENST00000563290 SPATA31C2B4DYI2 1134 aa6.28□□□□□ -1.4
SCAPER-207ENST00000563290 GJB6O95452 261 aa6.28□□□□□ -1.4
SCAPER-207ENST00000563290 ITGB5P18084 799 aa6.28□□□□□ -1.4
SCAPER-207ENST00000563290 SP100P23497 879 aaPredicted RBP6.28□□□□□ -1.4
SCAPER-207ENST00000563290 PSMC4P43686 418 aa6.28□□□□□ -1.4
SCAPER-207ENST00000563290 ZBTB17Q13105 803 aa6.28□□□□□ -1.4
SCAPER-207ENST00000563290 SV2CQ496J9 727 aa6.28□□□□□ -1.4
SCAPER-207ENST00000563290 COBLL1Q53SF7 1204 aa6.28□□□□□ -1.4
SCAPER-207ENST00000563290 CELF3Q5SZQ8 465 aaKnown RBP6.28□□□□□ -1.4
SCAPER-207ENST00000563290 FAM102AQ5T9C2 384 aaPredicted RBP6.28□□□□□ -1.4
SCAPER-207ENST00000563290 LBX2Q6XYB7 198 aa6.28□□□□□ -1.4
SCAPER-207ENST00000563290 HSPH1Q92598 858 aa6.28□□□□□ -1.4
SCAPER-207ENST00000563290 IFT43Q96FT9 208 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms