RNA–Protein interactions for RNA: ENST00000562775.1

SPG7-206, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 1 (best)

Gene SPG7, Length 1,595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-206ENST00000562775 CNKSR3Q6P9H4 555 aa14.93□□□□□ -0.02
SPG7-206ENST00000562775 DCLRE1AQ6PJP8 1040 aa14.93□□□□□ -0.02
SPG7-206ENST00000562775 ADGRF2Q8IZF7 708 aa14.93□□□□□ -0.02
SPG7-206ENST00000562775 MCOLN2Q8IZK6 566 aa14.93□□□□□ -0.02
SPG7-206ENST00000562775 ABI1Q8IZP0 508 aa14.93□□□□□ -0.02
SPG7-206ENST00000562775 CRIPAKQ8N1N5 446 aa14.93□□□□□ -0.02
SPG7-206ENST00000562775 CRYBG2Q8N1P7 616 aa14.93□□□□□ -0.02
SPG7-206ENST00000562775 TMEM86AQ8N2M4 240 aa14.93□□□□□ -0.02
SPG7-206ENST00000562775 PDCL2Q8N4E4 241 aa14.93□□□□□ -0.02
SPG7-206ENST00000562775 C3orf58Q8NDZ4 430 aa14.93□□□□□ -0.02
SPG7-206ENST00000562775 ZNF653Q96CK0 615 aa14.93□□□□□ -0.02
SPG7-206ENST00000562775 CALR3Q96L12 384 aaKnown RBP14.93□□□□□ -0.02
SPG7-206ENST00000562775 TBC1D13Q9NVG8 400 aa14.93□□□□□ -0.02
SPG7-206ENST00000562775 NME7Q9Y5B8 376 aa14.93□□□□□ -0.02
SPG7-206ENST00000562775 TTC3P53804 2025 aa14.92□□□□□ -0.02
SPG7-206ENST00000562775 FAM170AA1A519 330 aa14.92□□□□□ -0.02
SPG7-206ENST00000562775 O00370 1275 aa14.92□□□□□ -0.02
SPG7-206ENST00000562775 B3GAT3O94766 335 aa14.92□□□□□ -0.02
SPG7-206ENST00000562775 TIMP1P01033 207 aa14.92□□□□□ -0.02
SPG7-206ENST00000562775 SSTR3P32745 418 aaPredicted RBP14.92□□□□□ -0.02
SPG7-206ENST00000562775 HADHBP55084 474 aaKnown RBP14.92□□□□□ -0.02
SPG7-206ENST00000562775 IKBKEQ14164 716 aa14.92□□□□□ -0.02
SPG7-206ENST00000562775 DSTYKQ6XUX3 929 aa14.92□□□□□ -0.02
SPG7-206ENST00000562775 MON1BQ7L1V2 547 aa14.92□□□□□ -0.02
SPG7-206ENST00000562775 ACOT1Q86TX2 421 aa14.92□□□□□ -0.02
SPG7-206ENST00000562775 TPCN2Q8NHX9 752 aa14.92□□□□□ -0.02
SPG7-206ENST00000562775 RSPH1Q8WYR4 309 aa14.92□□□□□ -0.02
SPG7-206ENST00000562775 RABGGTAQ92696 567 aa14.92□□□□□ -0.02
SPG7-206ENST00000562775 AVENQ9NQS1 362 aaPredicted RBP14.92□□□□□ -0.02
SPG7-206ENST00000562775 CNOT8Q9UFF9 292 aaKnown RBP14.92□□□□□ -0.02
SPG7-206ENST00000562775 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.92□□□□□ -0.02
SPG7-206ENST00000562775 STXBP5LQ9Y2K9 1186 aa14.92□□□□□ -0.02
SPG7-206ENST00000562775 JRKLQ9Y4A0 524 aa14.92□□□□□ -0.02
SPG7-206ENST00000562775 MYH10P35580 1976 aa14.92□□□□□ -0.02
SPG7-206ENST00000562775 GRID2IPA4D2P6 1211 aa14.91□□□□□ -0.02
SPG7-206ENST00000562775 GABRDO14764 452 aa14.91□□□□□ -0.02
SPG7-206ENST00000562775 PALMO75781 387 aa14.91□□□□□ -0.02
SPG7-206ENST00000562775 URI1O94763 535 aaPredicted RBP14.91□□□□□ -0.02
SPG7-206ENST00000562775 MTA2O94776 668 aa14.91□□□□□ -0.02
SPG7-206ENST00000562775 DDHD2O94830 711 aa14.91□□□□□ -0.02
SPG7-206ENST00000562775 C1QBPQ07021 282 aaKnown RBP14.91□□□□□ -0.02
SPG7-206ENST00000562775 TIGD5Q53EQ6 642 aa14.91□□□□□ -0.02
SPG7-206ENST00000562775 WSCD1Q658N2 575 aa14.91□□□□□ -0.02
SPG7-206ENST00000562775 DENND1BQ6P3S1 775 aa14.91□□□□□ -0.02
SPG7-206ENST00000562775 LCLAT1Q6UWP7 414 aa14.91□□□□□ -0.02
SPG7-206ENST00000562775 CD300LGQ6UXG3 332 aa14.91□□□□□ -0.02
SPG7-206ENST00000562775 UBE2Q1Q7Z7E8 422 aa14.91□□□□□ -0.02
SPG7-206ENST00000562775 ZNF280BQ86YH2 543 aa14.91□□□□□ -0.02
SPG7-206ENST00000562775 NPAS4Q8IUM7 802 aa14.91□□□□□ -0.02
SPG7-206ENST00000562775 WDTC1Q8N5D0 677 aa14.91□□□□□ -0.02
SPG7-206ENST00000562775 C1orf131Q8NDD1 294 aaKnown RBP14.91□□□□□ -0.02
SPG7-206ENST00000562775 SPATA18Q8TC71 538 aa14.91□□□□□ -0.02
SPG7-206ENST00000562775 VWCEQ96DN2 955 aa14.91□□□□□ -0.02
SPG7-206ENST00000562775 TNIP3Q96KP6 325 aa14.91□□□□□ -0.02
SPG7-206ENST00000562775 CASD1Q96PB1 797 aa14.91□□□□□ -0.02
SPG7-206ENST00000562775 FAM193BQ96PV7 902 aaPredicted RBP14.91□□□□□ -0.02
SPG7-206ENST00000562775 OSGEPQ9NPF4 335 aa14.91□□□□□ -0.02
SPG7-206ENST00000562775 ADAM22Q9P0K1 906 aa14.91□□□□□ -0.02
SPG7-206ENST00000562775 CTTNBP2NLQ9P2B4 639 aa14.91□□□□□ -0.02
SPG7-206ENST00000562775 UVRAGQ9P2Y5 699 aa14.91□□□□□ -0.02
SPG7-206ENST00000562775 TRIM43BA6NCK2 446 aa14.9□□□□□ -0.02
SPG7-206ENST00000562775 MICAL2O94851 1124 aa14.9□□□□□ -0.02
SPG7-206ENST00000562775 ODC1P11926 461 aa14.9□□□□□ -0.02
SPG7-206ENST00000562775 RAG1P15918 1043 aa14.9□□□□□ -0.02
SPG7-206ENST00000562775 MMP8P22894 467 aa14.9□□□□□ -0.02
SPG7-206ENST00000562775 LMO2P25791 158 aa14.9□□□□□ -0.02
SPG7-206ENST00000562775 LHX1P48742 406 aa14.9□□□□□ -0.02
SPG7-206ENST00000562775 RNASELQ05823 741 aaKnown RBP14.9□□□□□ -0.02
SPG7-206ENST00000562775 LIN9Q5TKA1 542 aa14.9□□□□□ -0.02
SPG7-206ENST00000562775 ARHGAP17Q68EM7 881 aa14.9□□□□□ -0.02
SPG7-206ENST00000562775 OSTM1Q86WC4 334 aa14.9□□□□□ -0.02
SPG7-206ENST00000562775 COLGALT2Q8IYK4 626 aa14.9□□□□□ -0.02
SPG7-206ENST00000562775 TRIM43Q96BQ3 446 aaPredicted RBP14.9□□□□□ -0.02
SPG7-206ENST00000562775 C11orf70Q9BRQ4 267 aa14.9□□□□□ -0.02
SPG7-206ENST00000562775 L2HGDHQ9H9P8 463 aa14.9□□□□□ -0.02
SPG7-206ENST00000562775 PRDM5Q9NQX1 630 aaPredicted RBP14.9□□□□□ -0.02
SPG7-206ENST00000562775 COG5Q9UP83 839 aa14.9□□□□□ -0.02
SPG7-206ENST00000562775 MICAL3Q7RTP6 2002 aa14.9□□□□□ -0.02
SPG7-206ENST00000562775 ARHGEF37A1IGU5 675 aa14.9□□□□□ -0.02
SPG7-206ENST00000562775 TMEM189-UBE2V1I3L0A0 370 aa14.9□□□□□ -0.02
SPG7-206ENST00000562775 M0QYV0 167 aa14.9□□□□□ -0.02
SPG7-206ENST00000562775 M0QZQ0 153 aa14.9□□□□□ -0.02
SPG7-206ENST00000562775 ENC1O14682 589 aa14.9□□□□□ -0.02
SPG7-206ENST00000562775 B4GALT3O60512 393 aa14.9□□□□□ -0.02
SPG7-206ENST00000562775 ATP1A1P05023 1023 aaKnown RBP14.9□□□□□ -0.02
SPG7-206ENST00000562775 CALB1P05937 261 aa14.9□□□□□ -0.02
SPG7-206ENST00000562775 PDGFRBP09619 1106 aa14.9□□□□□ -0.02
SPG7-206ENST00000562775 ITGB8P26012 769 aa14.9□□□□□ -0.02
SPG7-206ENST00000562775 PTP4A2Q12974 167 aa14.9□□□□□ -0.02
SPG7-206ENST00000562775 TUBB2AQ13885 445 aa14.9□□□□□ -0.02
SPG7-206ENST00000562775 PAPD7Q5XG87 772 aaKnown RBP14.9□□□□□ -0.02
SPG7-206ENST00000562775 MMS22LQ6ZRQ5 1243 aa14.9□□□□□ -0.02
SPG7-206ENST00000562775 SLFN11Q7Z7L1 901 aa14.9□□□□□ -0.02
SPG7-206ENST00000562775 ERICH1Q86X53 443 aa14.9□□□□□ -0.02
SPG7-206ENST00000562775 SYCE1Q8N0S2 351 aa14.9□□□□□ -0.02
SPG7-206ENST00000562775 C12orf29Q8N999 325 aa14.9□□□□□ -0.02
SPG7-206ENST00000562775 LRRC57Q8N9N7 239 aa14.9□□□□□ -0.02
SPG7-206ENST00000562775 TUBB2BQ9BVA1 445 aa14.9□□□□□ -0.02
SPG7-206ENST00000562775 MRPL9Q9BYD2 267 aaKnown RBP14.9□□□□□ -0.02
SPG7-206ENST00000562775 DPEP3Q9H4B8 488 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms