RNA–Protein interactions for RNA: ENST00000562668.1

SMG1-206, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 449 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-206ENST00000562668 KIF13BQ9NQT8 1826 aa5.78□□□□□ -1.48
SMG1-206ENST00000562668 COL15A1P39059 1388 aa5.78□□□□□ -1.48
SMG1-206ENST00000562668 ARFGEF2Q9Y6D5 1785 aa5.78□□□□□ -1.48
SMG1-206ENST00000562668 ZBED9Q6R2W3 1325 aa5.77□□□□□ -1.49
SMG1-206ENST00000562668 USP42Q9H9J4 1324 aaKnown RBP5.77□□□□□ -1.49
SMG1-206ENST00000562668 CACNA1FO60840 1977 aa5.77□□□□□ -1.49
SMG1-206ENST00000562668 PIPSLA2A3N6 862 aa5.77□□□□□ -1.49
SMG1-206ENST00000562668 STARD3NLO95772 234 aa5.77□□□□□ -1.49
SMG1-206ENST00000562668 ECHS1P30084 290 aa5.77□□□□□ -1.49
SMG1-206ENST00000562668 IL6STP40189 918 aaPredicted RBP5.77□□□□□ -1.49
SMG1-206ENST00000562668 CLRN1P58418 232 aa5.77□□□□□ -1.49
SMG1-206ENST00000562668 BLOC1S1P78537 153 aa5.77□□□□□ -1.49
SMG1-206ENST00000562668 MXRA7P84157 204 aa5.77□□□□□ -1.49
SMG1-206ENST00000562668 EXOSC9Q06265 439 aaKnown RBP5.77□□□□□ -1.49
SMG1-206ENST00000562668 KRTAP1-1Q07627 177 aa5.77□□□□□ -1.49
SMG1-206ENST00000562668 TP53BP2Q13625 1128 aa5.77□□□□□ -1.49
SMG1-206ENST00000562668 AGAP9Q5VTM2 703 aa5.77□□□□□ -1.49
SMG1-206ENST00000562668 LINC00476Q8WZB0 136 aa5.77□□□□□ -1.49
SMG1-206ENST00000562668 VOPP1Q96AW1 172 aa5.77□□□□□ -1.49
SMG1-206ENST00000562668 ZNF764Q96H86 408 aaPredicted RBP5.77□□□□□ -1.49
SMG1-206ENST00000562668 QRSL1Q9H0R6 528 aaKnown RBP5.77□□□□□ -1.49
SMG1-206ENST00000562668 SYNPO2LQ9H987 977 aa5.77□□□□□ -1.49
SMG1-206ENST00000562668 TFCP2L1Q9NZI6 479 aa5.77□□□□□ -1.49
SMG1-206ENST00000562668 CAMTA2O94983 1202 aa5.76□□□□□ -1.49
SMG1-206ENST00000562668 SPDEFO95238 335 aa5.76□□□□□ -1.49
SMG1-206ENST00000562668 ANXA1P04083 346 aa5.76□□□□□ -1.49
SMG1-206ENST00000562668 CFIP05156 583 aa5.76□□□□□ -1.49
SMG1-206ENST00000562668 HKR1P10072 659 aa5.76□□□□□ -1.49
SMG1-206ENST00000562668 GYS1P13807 737 aa5.76□□□□□ -1.49
SMG1-206ENST00000562668 ALOX15P16050 662 aaPredicted RBP5.76□□□□□ -1.49
SMG1-206ENST00000562668 HMGB2P26583 209 aaKnown RBP5.76□□□□□ -1.49
SMG1-206ENST00000562668 ADSLP30566 484 aaPredicted RBP5.76□□□□□ -1.49
SMG1-206ENST00000562668 SOX5P35711 763 aa5.76□□□□□ -1.49
SMG1-206ENST00000562668 CCT2P78371 535 aaKnown RBP5.76□□□□□ -1.49
SMG1-206ENST00000562668 ADRM1Q16186 407 aa5.76□□□□□ -1.49
SMG1-206ENST00000562668 MUM1Q2TAK8 710 aa5.76□□□□□ -1.49
SMG1-206ENST00000562668 TWISTNBQ3B726 338 aaPredicted RBP5.76□□□□□ -1.49
SMG1-206ENST00000562668 STRIP1Q5VSL9 837 aa5.76□□□□□ -1.49
SMG1-206ENST00000562668 ABHD17BQ5VST6 288 aa5.76□□□□□ -1.49
SMG1-206ENST00000562668 ARMC6Q6NXE6 501 aa5.76□□□□□ -1.49
SMG1-206ENST00000562668 STRA8Q7Z7C7 330 aa5.76□□□□□ -1.49
SMG1-206ENST00000562668 ADGRG3Q86Y34 549 aa5.76□□□□□ -1.49
SMG1-206ENST00000562668 RHOT2Q8IXI1 618 aa5.76□□□□□ -1.49
SMG1-206ENST00000562668 DRC7Q8IY82 874 aa5.76□□□□□ -1.49
SMG1-206ENST00000562668 GPR156Q8NFN8 814 aa5.76□□□□□ -1.49
SMG1-206ENST00000562668 OR56A1Q8NGH5 318 aa5.76□□□□□ -1.49
SMG1-206ENST00000562668 ASB10Q8WXI3 467 aa5.76□□□□□ -1.49
SMG1-206ENST00000562668 CAVIN3Q969G5 261 aa5.76□□□□□ -1.49
SMG1-206ENST00000562668 SRP68Q9UHB9 627 aaKnown RBP5.76□□□□□ -1.49
SMG1-206ENST00000562668 NARFQ9UHQ1 456 aa5.76□□□□□ -1.49
SMG1-206ENST00000562668 SCOCQ9UIL1 159 aa5.76□□□□□ -1.49
SMG1-206ENST00000562668 MAP3K2Q9Y2U5 619 aa5.76□□□□□ -1.49
SMG1-206ENST00000562668 N4BP2Q86UW6 1770 aaPredicted RBP5.75□□□□□ -1.49
SMG1-206ENST00000562668 ANKRD31Q8N7Z5 1873 aa5.75□□□□□ -1.49
SMG1-206ENST00000562668 DRGXA6NNA5 263 aa5.75□□□□□ -1.49
SMG1-206ENST00000562668 KIAA0355O15063 1070 aa5.75□□□□□ -1.49
SMG1-206ENST00000562668 CDKL5O76039 1030 aa5.75□□□□□ -1.49
SMG1-206ENST00000562668 MTHFD2P13995 350 aa5.75□□□□□ -1.49
SMG1-206ENST00000562668 EIF2S2P20042 333 aaKnown RBP5.75□□□□□ -1.49
SMG1-206ENST00000562668 TM4SF1P30408 202 aa5.75□□□□□ -1.49
SMG1-206ENST00000562668 SEC24CP53992 1094 aa5.75□□□□□ -1.49
SMG1-206ENST00000562668 RAP2BP61225 183 aa5.75□□□□□ -1.49
SMG1-206ENST00000562668 RESTQ13127 1097 aa5.75□□□□□ -1.49
SMG1-206ENST00000562668 SP140Q13342 867 aa5.75□□□□□ -1.49
SMG1-206ENST00000562668 RRP12Q5JTH9 1297 aaKnown RBP5.75□□□□□ -1.49
SMG1-206ENST00000562668 Q6ZVL8 140 aa5.75□□□□□ -1.49
SMG1-206ENST00000562668 UBR7Q8N806 425 aa5.75□□□□□ -1.49
SMG1-206ENST00000562668 FBXO18Q8NFZ0 1043 aa5.75□□□□□ -1.49
SMG1-206ENST00000562668 TGFBRAP1Q8WUH2 860 aa5.75□□□□□ -1.49
SMG1-206ENST00000562668 HOXB13Q92826 284 aaPredicted RBP5.75□□□□□ -1.49
SMG1-206ENST00000562668 BBC3Q96PG8 261 aaPredicted RBP5.75□□□□□ -1.49
SMG1-206ENST00000562668 UHRF1Q96T88 793 aaPredicted RBP5.75□□□□□ -1.49
SMG1-206ENST00000562668 MYH16Q9H6N6 1097 aa5.75□□□□□ -1.49
SMG1-206ENST00000562668 CAAP1Q9H8G2 361 aa5.75□□□□□ -1.49
SMG1-206ENST00000562668 IFT122Q9HBG6 1241 aa5.75□□□□□ -1.49
SMG1-206ENST00000562668 DDX21Q9NR30 783 aaKnown RBP eCLIP5.75□□□□□ -1.49
SMG1-206ENST00000562668 PTGFRNQ9P2B2 879 aa5.75□□□□□ -1.49
SMG1-206ENST00000562668 CHPF2Q9P2E5 772 aa5.75□□□□□ -1.49
SMG1-206ENST00000562668 ATP11BQ9Y2G3 1177 aa5.75□□□□□ -1.49
SMG1-206ENST00000562668 EPN1Q9Y6I3 576 aaPredicted RBP5.75□□□□□ -1.49
SMG1-206ENST00000562668 ATRNL1Q5VV63 1379 aa5.75□□□□□ -1.49
SMG1-206ENST00000562668 ATP10DQ9P241 1426 aa5.74□□□□□ -1.49
SMG1-206ENST00000562668 BRINP1O60477 761 aa5.74□□□□□ -1.49
SMG1-206ENST00000562668 CLK3P49761 638 aaKnown RBP5.74□□□□□ -1.49
SMG1-206ENST00000562668 DDR1Q08345 913 aa5.74□□□□□ -1.49
SMG1-206ENST00000562668 HLFQ16534 295 aa5.74□□□□□ -1.49
SMG1-206ENST00000562668 FAM180AQ6UWF9 173 aa5.74□□□□□ -1.49
SMG1-206ENST00000562668 G2E3Q7L622 706 aa5.74□□□□□ -1.49
SMG1-206ENST00000562668 KCNK18Q7Z418 384 aa5.74□□□□□ -1.49
SMG1-206ENST00000562668 LMBR1Q8WVP7 490 aa5.74□□□□□ -1.49
SMG1-206ENST00000562668 FATE1Q969F0 183 aa5.74□□□□□ -1.49
SMG1-206ENST00000562668 FUBP3Q96I24 572 aaKnown RBP eCLIP5.74□□□□□ -1.49
SMG1-206ENST00000562668 ACE2Q9BYF1 805 aaPredicted RBP5.74□□□□□ -1.49
SMG1-206ENST00000562668 SLKQ9H2G2 1235 aaPredicted RBP5.74□□□□□ -1.49
SMG1-206ENST00000562668 GREM2Q9H772 168 aa5.74□□□□□ -1.49
SMG1-206ENST00000562668 LANCL2Q9NS86 450 aa5.74□□□□□ -1.49
SMG1-206ENST00000562668 RBM12Q9NTZ6 932 aaKnown RBP5.74□□□□□ -1.49
SMG1-206ENST00000562668 KLHL11Q9NVR0 708 aa5.74□□□□□ -1.49
SMG1-206ENST00000562668 DBF4Q9UBU7 674 aaPredicted RBP5.74□□□□□ -1.49
SMG1-206ENST00000562668 TNRC6CQ9HCJ0 1690 aaKnown RBP5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms