RNA–Protein interactions for RNA: ENST00000562576.5

CNEP1R1-204, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 5 BASIC

Gene CNEP1R1, Length 656 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-204ENST00000562576 ATF2P15336 505 aa7.55□□□□□ -1.2
CNEP1R1-204ENST00000562576 CDC27P30260 824 aa7.55□□□□□ -1.2
CNEP1R1-204ENST00000562576 ELF1P32519 619 aa7.55□□□□□ -1.2
CNEP1R1-204ENST00000562576 EIF2S3P41091 472 aaKnown RBP7.55□□□□□ -1.2
CNEP1R1-204ENST00000562576 RELBQ01201 579 aa7.55□□□□□ -1.2
CNEP1R1-204ENST00000562576 CAPSQ13938 189 aa7.55□□□□□ -1.2
CNEP1R1-204ENST00000562576 ITPRIPL2Q3MIP1 535 aa7.55□□□□□ -1.2
CNEP1R1-204ENST00000562576 EEF1DP3Q658K8 133 aa7.55□□□□□ -1.2
CNEP1R1-204ENST00000562576 ANO7Q6IWH7 933 aa7.55□□□□□ -1.2
CNEP1R1-204ENST00000562576 SLC8B1Q6J4K2 584 aa7.55□□□□□ -1.2
CNEP1R1-204ENST00000562576 TTC30AQ86WT1 665 aa7.55□□□□□ -1.2
CNEP1R1-204ENST00000562576 CAMKK1Q8N5S9 505 aa7.55□□□□□ -1.2
CNEP1R1-204ENST00000562576 TTC9BQ8N6N2 239 aa7.55□□□□□ -1.2
CNEP1R1-204ENST00000562576 PSPC1Q8WXF1 523 aaKnown RBP7.55□□□□□ -1.2
CNEP1R1-204ENST00000562576 CEP170P1Q96L14 293 aa7.55□□□□□ -1.2
CNEP1R1-204ENST00000562576 ZNF512Q96ME7 567 aaPredicted RBP7.55□□□□□ -1.2
CNEP1R1-204ENST00000562576 TCEANC2Q96MN5 208 aa7.55□□□□□ -1.2
CNEP1R1-204ENST00000562576 INSM2Q96T92 566 aaPredicted RBP7.55□□□□□ -1.2
CNEP1R1-204ENST00000562576 TEKT3Q9BXF9 490 aa7.55□□□□□ -1.2
CNEP1R1-204ENST00000562576 TRIM6Q9C030 488 aaPredicted RBP7.55□□□□□ -1.2
CNEP1R1-204ENST00000562576 PRORYQ9H606 182 aa7.55□□□□□ -1.2
CNEP1R1-204ENST00000562576 ZDHHC4Q9NPG8 344 aa7.55□□□□□ -1.2
CNEP1R1-204ENST00000562576 EBF1Q9UH73 591 aa7.55□□□□□ -1.2
CNEP1R1-204ENST00000562576 CCL26Q9Y258 94 aa7.55□□□□□ -1.2
CNEP1R1-204ENST00000562576 FLNCQ14315 2725 aa7.54□□□□□ -1.2
CNEP1R1-204ENST00000562576 A0A1B0GUA9 196 aa7.54□□□□□ -1.2
CNEP1R1-204ENST00000562576 UPK3BL1B0FP48 263 aa7.54□□□□□ -1.2
CNEP1R1-204ENST00000562576 UPK3BL2E5RIL1 263 aa7.54□□□□□ -1.2
CNEP1R1-204ENST00000562576 H0Y626 953 aa7.54□□□□□ -1.2
CNEP1R1-204ENST00000562576 TRDMT1O14717 391 aaKnown RBP7.54□□□□□ -1.2
CNEP1R1-204ENST00000562576 TRIM16O95361 564 aa7.54□□□□□ -1.2
CNEP1R1-204ENST00000562576 THP07101 528 aa7.54□□□□□ -1.2
CNEP1R1-204ENST00000562576 JAK3P52333 1124 aa7.54□□□□□ -1.2
CNEP1R1-204ENST00000562576 SEC13P55735 322 aa7.54□□□□□ -1.2
CNEP1R1-204ENST00000562576 CLDN6P56747 220 aa7.54□□□□□ -1.2
CNEP1R1-204ENST00000562576 CYP4F8P98187 520 aa7.54□□□□□ -1.2
CNEP1R1-204ENST00000562576 SETQ01105 290 aaPredicted RBP7.54□□□□□ -1.2
CNEP1R1-204ENST00000562576 SRSF11Q05519 484 aaKnown RBP7.54□□□□□ -1.2
CNEP1R1-204ENST00000562576 GRSF1Q12849 480 aaKnown RBP eCLIP7.54□□□□□ -1.2
CNEP1R1-204ENST00000562576 EMC2Q15006 297 aa7.54□□□□□ -1.2
CNEP1R1-204ENST00000562576 UPP1Q16831 310 aa7.54□□□□□ -1.2
CNEP1R1-204ENST00000562576 ZNF423Q2M1K9 1284 aa7.54□□□□□ -1.2
CNEP1R1-204ENST00000562576 ARHGAP29Q52LW3 1261 aa7.54□□□□□ -1.2
CNEP1R1-204ENST00000562576 GPR158Q5T848 1215 aa7.54□□□□□ -1.2
CNEP1R1-204ENST00000562576 TICAM2Q86XR7 235 aa7.54□□□□□ -1.2
CNEP1R1-204ENST00000562576 MINDY1Q8N5J2 469 aa7.54□□□□□ -1.2
CNEP1R1-204ENST00000562576 CCDC33Q8N5R6 958 aa7.54□□□□□ -1.2
CNEP1R1-204ENST00000562576 MDGA1Q8NFP4 955 aa7.54□□□□□ -1.2
CNEP1R1-204ENST00000562576 RNF217Q8TC41 542 aa7.54□□□□□ -1.2
CNEP1R1-204ENST00000562576 PGLYRP2Q96PD5 576 aa7.54□□□□□ -1.2
CNEP1R1-204ENST00000562576 RIT2Q99578 217 aa7.54□□□□□ -1.2
CNEP1R1-204ENST00000562576 FAM83CQ9BQN1 747 aa7.54□□□□□ -1.2
CNEP1R1-204ENST00000562576 ASAH2Q9NR71 780 aa7.54□□□□□ -1.2
CNEP1R1-204ENST00000562576 ENAMQ9NRM1 1142 aa7.54□□□□□ -1.2
CNEP1R1-204ENST00000562576 RGL1Q9NZL6 768 aa7.54□□□□□ -1.2
CNEP1R1-204ENST00000562576 EVLQ9UI08 416 aaPredicted RBP7.54□□□□□ -1.2
CNEP1R1-204ENST00000562576 GDAQ9Y2T3 454 aa7.54□□□□□ -1.2
CNEP1R1-204ENST00000562576 SLC12A7Q9Y666 1083 aa7.54□□□□□ -1.2
CNEP1R1-204ENST00000562576 TNRC6BQ9UPQ9 1833 aaKnown RBP7.54□□□□□ -1.2
CNEP1R1-204ENST00000562576 HELZP42694 1942 aaKnown RBP7.54□□□□□ -1.2
CNEP1R1-204ENST00000562576 UBR5O95071 2799 aaPredicted RBP7.54□□□□□ -1.2
CNEP1R1-204ENST00000562576 TLX3O43711 291 aaPredicted RBP7.53□□□□□ -1.2
CNEP1R1-204ENST00000562576 ATG13O75143 517 aa7.53□□□□□ -1.2
CNEP1R1-204ENST00000562576 ATXN1LP0C7T5 689 aaKnown RBP7.53□□□□□ -1.2
CNEP1R1-204ENST00000562576 GLRA2P23416 452 aa7.53□□□□□ -1.2
CNEP1R1-204ENST00000562576 SFNP31947 248 aa7.53□□□□□ -1.2
CNEP1R1-204ENST00000562576 ADD1P35611 737 aaKnown RBP7.53□□□□□ -1.2
CNEP1R1-204ENST00000562576 PSMC5P62195 406 aa7.53□□□□□ -1.2
CNEP1R1-204ENST00000562576 CFHR1Q03591 330 aa7.53□□□□□ -1.2
CNEP1R1-204ENST00000562576 MESP2Q0VG99 397 aa7.53□□□□□ -1.2
CNEP1R1-204ENST00000562576 LMAN2Q12907 356 aa7.53□□□□□ -1.2
CNEP1R1-204ENST00000562576 PSMD2Q13200 908 aa7.53□□□□□ -1.2
CNEP1R1-204ENST00000562576 RUNX3Q13761 415 aa7.53□□□□□ -1.2
CNEP1R1-204ENST00000562576 MRPL58Q14197 206 aaKnown RBP7.53□□□□□ -1.2
CNEP1R1-204ENST00000562576 USP39Q53GS9 565 aaKnown RBP7.53□□□□□ -1.2
CNEP1R1-204ENST00000562576 C2orf27AQ580R0 203 aa7.53□□□□□ -1.2
CNEP1R1-204ENST00000562576 IQCEQ6IPM2 695 aa7.53□□□□□ -1.2
CNEP1R1-204ENST00000562576 SLC27A1Q6PCB7 646 aa7.53□□□□□ -1.2
CNEP1R1-204ENST00000562576 SLC23A3Q6PIS1 610 aa7.53□□□□□ -1.2
CNEP1R1-204ENST00000562576 TOGARAM2Q6ZUX3 1019 aa7.53□□□□□ -1.2
CNEP1R1-204ENST00000562576 ANKS3Q6ZW76 656 aa7.53□□□□□ -1.2
CNEP1R1-204ENST00000562576 RTL10Q7L3V2 364 aa7.53□□□□□ -1.2
CNEP1R1-204ENST00000562576 SYT13Q7L8C5 426 aa7.53□□□□□ -1.2
CNEP1R1-204ENST00000562576 ERLEC1Q96DZ1 483 aa7.53□□□□□ -1.2
CNEP1R1-204ENST00000562576 MSANTD3Q96H12 275 aa7.53□□□□□ -1.2
CNEP1R1-204ENST00000562576 PPP1R10Q96QC0 940 aaKnown RBP7.53□□□□□ -1.2
CNEP1R1-204ENST00000562576 NUSAP1Q9BXS6 441 aaKnown RBP7.53□□□□□ -1.2
CNEP1R1-204ENST00000562576 SLC46A2Q9BY10 475 aa7.53□□□□□ -1.2
CNEP1R1-204ENST00000562576 PDZD7Q9H5P4 517 aa7.53□□□□□ -1.2
CNEP1R1-204ENST00000562576 CLMPQ9H6B4 373 aa7.53□□□□□ -1.2
CNEP1R1-204ENST00000562576 POLD4Q9HCU8 107 aa7.53□□□□□ -1.2
CNEP1R1-204ENST00000562576 GPRC5CQ9NQ84 441 aa7.53□□□□□ -1.2
CNEP1R1-204ENST00000562576 PILRBQ9UKJ0 227 aa7.53□□□□□ -1.2
CNEP1R1-204ENST00000562576 YIPF1Q9Y548 306 aa7.53□□□□□ -1.2
CNEP1R1-204ENST00000562576 PTPRDP23468 1912 aa7.52□□□□□ -1.2
CNEP1R1-204ENST00000562576 ANKRD17O75179 2603 aaKnown RBP7.52□□□□□ -1.21
CNEP1R1-204ENST00000562576 PCDH15Q96QU1 1955 aa7.52□□□□□ -1.21
CNEP1R1-204ENST00000562576 AXLP30530 894 aa7.52□□□□□ -1.21
CNEP1R1-204ENST00000562576 GJA4P35212 333 aa7.52□□□□□ -1.21
CNEP1R1-204ENST00000562576 DUSP4Q13115 394 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms