RNA–Protein interactions for RNA: ENST00000562298.1

VPS9D1-AS1-201, VPS9D1 antisense RNA 1, humanhuman

TSL 1 (best)

Gene VPS9D1-AS1, Length 931 nt, Biotype antisense RNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-AS1-201ENST00000562298 ARHGAP29Q52LW3 1261 aa18.02■□□□□ 0.48
VPS9D1-AS1-201ENST00000562298 FAM173BQ6P4H8 233 aa18.02■□□□□ 0.48
VPS9D1-AS1-201ENST00000562298 Q6ZS52 159 aa18.02■□□□□ 0.48
VPS9D1-AS1-201ENST00000562298 THEM5Q8N1Q8 247 aa18.02■□□□□ 0.48
VPS9D1-AS1-201ENST00000562298 SPEM1Q8N4L4 309 aa18.02■□□□□ 0.48
VPS9D1-AS1-201ENST00000562298 SPPL2BQ8TCT7 592 aa18.02■□□□□ 0.48
VPS9D1-AS1-201ENST00000562298 C2orf15Q8WU43 125 aaKnown RBP18.02■□□□□ 0.48
VPS9D1-AS1-201ENST00000562298 SECISBP2LQ93073 1101 aaKnown RBP18.02■□□□□ 0.48
VPS9D1-AS1-201ENST00000562298 CLIC6Q96NY7 704 aa18.02■□□□□ 0.48
VPS9D1-AS1-201ENST00000562298 FAM213AQ9BRX8 229 aa18.02■□□□□ 0.48
VPS9D1-AS1-201ENST00000562298 SLC46A2Q9BY10 475 aa18.02■□□□□ 0.48
VPS9D1-AS1-201ENST00000562298 SMG9Q9H0W8 520 aaKnown RBP18.02■□□□□ 0.48
VPS9D1-AS1-201ENST00000562298 TASP1Q9H6P5 420 aa18.02■□□□□ 0.48
VPS9D1-AS1-201ENST00000562298 MRPL44Q9H9J2 332 aaKnown RBP18.02■□□□□ 0.48
VPS9D1-AS1-201ENST00000562298 PARD6AQ9NPB6 346 aa18.02■□□□□ 0.48
VPS9D1-AS1-201ENST00000562298 C2orf42Q9NWW7 574 aa18.02■□□□□ 0.48
VPS9D1-AS1-201ENST00000562298 ABI2Q9NYB9 513 aaPredicted RBP18.02■□□□□ 0.48
VPS9D1-AS1-201ENST00000562298 TBC1D7Q9P0N9 293 aa18.02■□□□□ 0.48
VPS9D1-AS1-201ENST00000562298 SRPRBQ9Y5M8 271 aaKnown RBP18.02■□□□□ 0.48
VPS9D1-AS1-201ENST00000562298 IL18RAPO95256 599 aa18.01■□□□□ 0.47
VPS9D1-AS1-201ENST00000562298 CDC25CP30307 473 aa18.01■□□□□ 0.47
VPS9D1-AS1-201ENST00000562298 RESTQ13127 1097 aa18.01■□□□□ 0.47
VPS9D1-AS1-201ENST00000562298 LRRC32Q14392 662 aa18.01■□□□□ 0.47
VPS9D1-AS1-201ENST00000562298 POSTNQ15063 836 aa18.01■□□□□ 0.47
VPS9D1-AS1-201ENST00000562298 LPAL2Q16609 132 aa18.01■□□□□ 0.47
VPS9D1-AS1-201ENST00000562298 SV2CQ496J9 727 aa18.01■□□□□ 0.47
VPS9D1-AS1-201ENST00000562298 L1TD1Q5T7N2 865 aaKnown RBP18.01■□□□□ 0.47
VPS9D1-AS1-201ENST00000562298 SCARA3Q6AZY7 606 aa18.01■□□□□ 0.47
VPS9D1-AS1-201ENST00000562298 TMEM150AQ86TG1 271 aa18.01■□□□□ 0.47
VPS9D1-AS1-201ENST00000562298 RALGPS2Q86X27 583 aaPredicted RBP18.01■□□□□ 0.47
VPS9D1-AS1-201ENST00000562298 GPR161Q8N6U8 529 aaKnown RBP18.01■□□□□ 0.47
VPS9D1-AS1-201ENST00000562298 BPIFB1Q8TDL5 484 aa18.01■□□□□ 0.47
VPS9D1-AS1-201ENST00000562298 FGFBP2Q9BYJ0 223 aa18.01■□□□□ 0.47
VPS9D1-AS1-201ENST00000562298 TMLHEQ9NVH6 421 aa18.01■□□□□ 0.47
VPS9D1-AS1-201ENST00000562298 SEL1LQ9UBV2 794 aa18.01■□□□□ 0.47
VPS9D1-AS1-201ENST00000562298 CCDC39Q9UFE4 941 aa18.01■□□□□ 0.47
VPS9D1-AS1-201ENST00000562298 CEP250Q9BV73 2442 aa18.01■□□□□ 0.47
VPS9D1-AS1-201ENST00000562298 OBSL1O75147 1896 aa18.01■□□□□ 0.47
VPS9D1-AS1-201ENST00000562298 K7ESF4 209 aa18■□□□□ 0.47
VPS9D1-AS1-201ENST00000562298 CENPBP07199 599 aaPredicted RBP18■□□□□ 0.47
VPS9D1-AS1-201ENST00000562298 HMGA1P17096 107 aaKnown RBP18■□□□□ 0.47
VPS9D1-AS1-201ENST00000562298 SMARCB1Q12824 385 aa18■□□□□ 0.47
VPS9D1-AS1-201ENST00000562298 PON2Q15165 354 aa18■□□□□ 0.47
VPS9D1-AS1-201ENST00000562298 RRAGBQ5VZM2 374 aa18■□□□□ 0.47
VPS9D1-AS1-201ENST00000562298 SV2BQ7L1I2 683 aa18■□□□□ 0.47
VPS9D1-AS1-201ENST00000562298 NT5DC4Q86YG4 428 aa18■□□□□ 0.47
VPS9D1-AS1-201ENST00000562298 CELF5Q8N6W0 485 aaKnown RBP18■□□□□ 0.47
VPS9D1-AS1-201ENST00000562298 C1orf127Q8N9H9 656 aa18■□□□□ 0.47
VPS9D1-AS1-201ENST00000562298 STKLD1Q8NE28 680 aa18■□□□□ 0.47
VPS9D1-AS1-201ENST00000562298 SAAL1Q96ER3 474 aa18■□□□□ 0.47
VPS9D1-AS1-201ENST00000562298 FAM84AQ96KN4 292 aa18■□□□□ 0.47
VPS9D1-AS1-201ENST00000562298 ZNF560Q96MR9 790 aa18■□□□□ 0.47
VPS9D1-AS1-201ENST00000562298 OLFML3Q9NRN5 406 aa18■□□□□ 0.47
VPS9D1-AS1-201ENST00000562298 A0A087X0B3 334 aa17.99■□□□□ 0.47
VPS9D1-AS1-201ENST00000562298 CHURC1-FNTBB4DL54 471 aa17.99■□□□□ 0.47
VPS9D1-AS1-201ENST00000562298 PAPSS2O95340 614 aaPredicted RBP17.99■□□□□ 0.47
VPS9D1-AS1-201ENST00000562298 GCNT3O95395 438 aa17.99■□□□□ 0.47
VPS9D1-AS1-201ENST00000562298 ITGB3P05106 788 aa17.99■□□□□ 0.47
VPS9D1-AS1-201ENST00000562298 GAP43P17677 238 aa17.99■□□□□ 0.47
VPS9D1-AS1-201ENST00000562298 POLR2BP30876 1174 aaKnown RBP17.99■□□□□ 0.47
VPS9D1-AS1-201ENST00000562298 HOXC13P31276 330 aa17.99■□□□□ 0.47
VPS9D1-AS1-201ENST00000562298 FNTBP49356 437 aa17.99■□□□□ 0.47
VPS9D1-AS1-201ENST00000562298 GPR15P49685 360 aa17.99■□□□□ 0.47
VPS9D1-AS1-201ENST00000562298 TFAMQ00059 246 aaKnown RBP17.99■□□□□ 0.47
VPS9D1-AS1-201ENST00000562298 CEBPZQ03701 1054 aaKnown RBP17.99■□□□□ 0.47
VPS9D1-AS1-201ENST00000562298 CCINQ13939 588 aa17.99■□□□□ 0.47
VPS9D1-AS1-201ENST00000562298 DGKKQ5KSL6 1271 aa17.99■□□□□ 0.47
VPS9D1-AS1-201ENST00000562298 BRSK2Q8IWQ3 736 aa17.99■□□□□ 0.47
VPS9D1-AS1-201ENST00000562298 DCP1BQ8IZD4 617 aaKnown RBP17.99■□□□□ 0.47
VPS9D1-AS1-201ENST00000562298 CMTM8Q8IZV2 173 aa17.99■□□□□ 0.47
VPS9D1-AS1-201ENST00000562298 PDCL2Q8N4E4 241 aa17.99■□□□□ 0.47
VPS9D1-AS1-201ENST00000562298 CXorf38Q8TB03 319 aa17.99■□□□□ 0.47
VPS9D1-AS1-201ENST00000562298 GCNAQ96QF7 691 aa17.99■□□□□ 0.47
VPS9D1-AS1-201ENST00000562298 ACCSQ96QU6 501 aa17.99■□□□□ 0.47
VPS9D1-AS1-201ENST00000562298 GMEB2Q9UKD1 530 aa17.99■□□□□ 0.47
VPS9D1-AS1-201ENST00000562298 USP18Q9UMW8 372 aa17.99■□□□□ 0.47
VPS9D1-AS1-201ENST00000562298 L1RE1Q9UN81 338 aa17.99■□□□□ 0.47
VPS9D1-AS1-201ENST00000562298 EXOC7Q9UPT5 735 aa17.99■□□□□ 0.47
VPS9D1-AS1-201ENST00000562298 CCL26Q9Y258 94 aa17.99■□□□□ 0.47
VPS9D1-AS1-201ENST00000562298 PCDHB5Q9Y5E4 795 aa17.99■□□□□ 0.47
VPS9D1-AS1-201ENST00000562298 DENND4CQ5VZ89 1909 aa17.99■□□□□ 0.47
VPS9D1-AS1-201ENST00000562298 LAMA1P25391 3075 aa17.98■□□□□ 0.47
VPS9D1-AS1-201ENST00000562298 FRMD3A2A2Y4 597 aa17.98■□□□□ 0.47
VPS9D1-AS1-201ENST00000562298 HRO43593 1189 aa17.98■□□□□ 0.47
VPS9D1-AS1-201ENST00000562298 F11P03951 625 aa17.98■□□□□ 0.47
VPS9D1-AS1-201ENST00000562298 PDCP20941 246 aa17.98■□□□□ 0.47
VPS9D1-AS1-201ENST00000562298 SYT1P21579 422 aa17.98■□□□□ 0.47
VPS9D1-AS1-201ENST00000562298 PNPLA4P41247 253 aa17.98■□□□□ 0.47
VPS9D1-AS1-201ENST00000562298 ATXN1P54253 815 aaKnown RBP17.98■□□□□ 0.47
VPS9D1-AS1-201ENST00000562298 NLRP12P59046 1061 aa17.98■□□□□ 0.47
VPS9D1-AS1-201ENST00000562298 PLCB2Q00722 1185 aa17.98■□□□□ 0.47
VPS9D1-AS1-201ENST00000562298 LMNB2Q03252 620 aa17.98■□□□□ 0.47
VPS9D1-AS1-201ENST00000562298 SPEM2Q0P670 501 aa17.98■□□□□ 0.47
VPS9D1-AS1-201ENST00000562298 SRSF5Q13243 272 aaKnown RBP17.98■□□□□ 0.47
VPS9D1-AS1-201ENST00000562298 TAF12Q16514 161 aa17.98■□□□□ 0.47
VPS9D1-AS1-201ENST00000562298 LAIR1Q6GTX8 287 aa17.98■□□□□ 0.47
VPS9D1-AS1-201ENST00000562298 PRR23BQ6ZRT6 265 aa17.98■□□□□ 0.47
VPS9D1-AS1-201ENST00000562298 MAB21L3Q8N8X9 362 aa17.98■□□□□ 0.47
VPS9D1-AS1-201ENST00000562298 CHFRQ96EP1 664 aa17.98■□□□□ 0.47
VPS9D1-AS1-201ENST00000562298 CBWD1Q9BRT8 395 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms