RNA–Protein interactions for RNA: ENST00000562118.1

CDH1-204, Transcript of cadherin 1, humanhuman

TSL 2

Gene CDH1, Length 952 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-204ENST00000562118 TCERG1LQ5VWI1 586 aa14.37□□□□□ -0.11
CDH1-204ENST00000562118 SPOPLQ6IQ16 392 aa14.37□□□□□ -0.11
CDH1-204ENST00000562118 DPY19L2P1Q6NXN4 242 aa14.37□□□□□ -0.11
CDH1-204ENST00000562118 APTXQ7Z2E3 356 aaKnown RBP14.37□□□□□ -0.11
CDH1-204ENST00000562118 METTL23Q86XA0 190 aa14.37□□□□□ -0.11
CDH1-204ENST00000562118 DHX40Q8IX18 779 aaKnown RBP14.37□□□□□ -0.11
CDH1-204ENST00000562118 PPM1EQ8WY54 764 aa14.37□□□□□ -0.11
CDH1-204ENST00000562118 ADAM7Q9H2U9 754 aa14.37□□□□□ -0.11
CDH1-204ENST00000562118 CRISPLD1Q9H336 500 aa14.37□□□□□ -0.11
CDH1-204ENST00000562118 SMYD3Q9H7B4 428 aa14.37□□□□□ -0.11
CDH1-204ENST00000562118 ABCB6Q9NP58 842 aa14.37□□□□□ -0.11
CDH1-204ENST00000562118 DDX43Q9NXZ2 648 aaKnown RBP14.37□□□□□ -0.11
CDH1-204ENST00000562118 CD207Q9UJ71 328 aa14.37□□□□□ -0.11
CDH1-204ENST00000562118 CDH9Q9ULB4 789 aa14.37□□□□□ -0.11
CDH1-204ENST00000562118 R3HCC1Q9Y3T6 440 aaKnown RBP14.37□□□□□ -0.11
CDH1-204ENST00000562118 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.37□□□□□ -0.11
CDH1-204ENST00000562118 OBSL1O75147 1896 aa14.37□□□□□ -0.11
CDH1-204ENST00000562118 DOCK6Q96HP0 2047 aa14.37□□□□□ -0.11
CDH1-204ENST00000562118 DOCK8Q8NF50 2099 aa14.37□□□□□ -0.11
CDH1-204ENST00000562118 SYCE3A1L190 88 aa14.36□□□□□ -0.11
CDH1-204ENST00000562118 GRXCR2A6NFK2 248 aa14.36□□□□□ -0.11
CDH1-204ENST00000562118 SEC24AO95486 1093 aa14.36□□□□□ -0.11
CDH1-204ENST00000562118 P4HA1P13674 534 aa14.36□□□□□ -0.11
CDH1-204ENST00000562118 LMO2P25791 158 aa14.36□□□□□ -0.11
CDH1-204ENST00000562118 PCSK1P29120 753 aa14.36□□□□□ -0.11
CDH1-204ENST00000562118 TFF2Q03403 129 aa14.36□□□□□ -0.11
CDH1-204ENST00000562118 IQCB1Q15051 598 aa14.36□□□□□ -0.11
CDH1-204ENST00000562118 SMAD2Q15796 467 aaKnown RBP14.36□□□□□ -0.11
CDH1-204ENST00000562118 CFAP221Q4G0U5 840 aa14.36□□□□□ -0.11
CDH1-204ENST00000562118 LLGL2Q6P1M3 1020 aa14.36□□□□□ -0.11
CDH1-204ENST00000562118 RNF19BQ6ZMZ0 732 aa14.36□□□□□ -0.11
CDH1-204ENST00000562118 GPR149Q86SP6 731 aa14.36□□□□□ -0.11
CDH1-204ENST00000562118 UNC93AQ86WB7 457 aa14.36□□□□□ -0.11
CDH1-204ENST00000562118 PALB2Q86YC2 1186 aa14.36□□□□□ -0.11
CDH1-204ENST00000562118 THEM5Q8N1Q8 247 aa14.36□□□□□ -0.11
CDH1-204ENST00000562118 FEZF2Q8TBJ5 459 aa14.36□□□□□ -0.11
CDH1-204ENST00000562118 PI4K2AQ9BTU6 479 aa14.36□□□□□ -0.11
CDH1-204ENST00000562118 IMPG2Q9BZV3 1241 aa14.36□□□□□ -0.11
CDH1-204ENST00000562118 AVENQ9NQS1 362 aaPredicted RBP14.36□□□□□ -0.11
CDH1-204ENST00000562118 TMLHEQ9NVH6 421 aa14.36□□□□□ -0.11
CDH1-204ENST00000562118 KCNJ18B7U540 433 aa14.35□□□□□ -0.11
CDH1-204ENST00000562118 H3BQ06 376 aaPredicted RBP14.35□□□□□ -0.11
CDH1-204ENST00000562118 HCRTO43612 131 aa14.35□□□□□ -0.11
CDH1-204ENST00000562118 CILPO75339 1184 aa14.35□□□□□ -0.11
CDH1-204ENST00000562118 CAVIN2O95810 425 aa14.35□□□□□ -0.11
CDH1-204ENST00000562118 C8AP07357 584 aa14.35□□□□□ -0.11
CDH1-204ENST00000562118 OR4Q2P0C623 313 aa14.35□□□□□ -0.11
CDH1-204ENST00000562118 BMP1P13497 986 aa14.35□□□□□ -0.11
CDH1-204ENST00000562118 CA8P35219 290 aa14.35□□□□□ -0.11
CDH1-204ENST00000562118 KCNJ12Q14500 433 aa14.35□□□□□ -0.11
CDH1-204ENST00000562118 AAK1Q2M2I8 961 aa14.35□□□□□ -0.11
CDH1-204ENST00000562118 ELMSAN1Q6PJG2 1045 aa14.35□□□□□ -0.11
CDH1-204ENST00000562118 CCDC149Q6ZUS6 474 aa14.35□□□□□ -0.11
CDH1-204ENST00000562118 GLYCTKQ8IVS8 523 aa14.35□□□□□ -0.11
CDH1-204ENST00000562118 DCP1BQ8IZD4 617 aaKnown RBP14.35□□□□□ -0.11
CDH1-204ENST00000562118 CRYBG2Q8N1P7 616 aa14.35□□□□□ -0.11
CDH1-204ENST00000562118 SPPL2BQ8TCT7 592 aa14.35□□□□□ -0.11
CDH1-204ENST00000562118 WHAMMQ8TF30 809 aa14.35□□□□□ -0.11
CDH1-204ENST00000562118 FUBP3Q96I24 572 aaKnown RBP eCLIP14.35□□□□□ -0.11
CDH1-204ENST00000562118 ASB2Q96Q27 587 aa14.35□□□□□ -0.11
CDH1-204ENST00000562118 TUBGCP2Q9BSJ2 902 aa14.35□□□□□ -0.11
CDH1-204ENST00000562118 PRKD2Q9BZL6 878 aa14.35□□□□□ -0.11
CDH1-204ENST00000562118 NAT10Q9H0A0 1025 aaKnown RBP14.35□□□□□ -0.11
CDH1-204ENST00000562118 CRTAC1Q9NQ79 661 aa14.35□□□□□ -0.11
CDH1-204ENST00000562118 NXF1Q9UBU9 619 aaKnown RBP14.35□□□□□ -0.11
CDH1-204ENST00000562118 LIMA1Q9UHB6 759 aaKnown RBP14.35□□□□□ -0.11
CDH1-204ENST00000562118 BDP1A6H8Y1 2624 aa14.34□□□□□ -0.11
CDH1-204ENST00000562118 RFPL2O75678 378 aa14.34□□□□□ -0.11
CDH1-204ENST00000562118 CPB1P15086 417 aa14.34□□□□□ -0.11
CDH1-204ENST00000562118 GNL1P36915 607 aaPredicted RBP14.34□□□□□ -0.11
CDH1-204ENST00000562118 MAGEA11P43364 429 aa14.34□□□□□ -0.11
CDH1-204ENST00000562118 CDH8P55286 799 aa14.34□□□□□ -0.11
CDH1-204ENST00000562118 MRPS5P82675 430 aaKnown RBP14.34□□□□□ -0.11
CDH1-204ENST00000562118 GCNT1Q02742 428 aa14.34□□□□□ -0.11
CDH1-204ENST00000562118 ADCY1Q08828 1119 aa14.34□□□□□ -0.11
CDH1-204ENST00000562118 SKIV2LQ15477 1246 aaKnown RBP14.34□□□□□ -0.11
CDH1-204ENST00000562118 NFE2Q16621 373 aaPredicted RBP14.34□□□□□ -0.11
CDH1-204ENST00000562118 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.34□□□□□ -0.11
CDH1-204ENST00000562118 TTC39CQ8N584 583 aa14.34□□□□□ -0.11
CDH1-204ENST00000562118 EHBP1Q8NDI1 1231 aa14.34□□□□□ -0.11
CDH1-204ENST00000562118 SLC7A14Q8TBB6 771 aa14.34□□□□□ -0.11
CDH1-204ENST00000562118 MYCBPAPQ8TBZ2 947 aa14.34□□□□□ -0.11
CDH1-204ENST00000562118 TATDN2Q93075 761 aa14.34□□□□□ -0.11
CDH1-204ENST00000562118 JAKMIP2Q96AA8 810 aa14.34□□□□□ -0.11
CDH1-204ENST00000562118 ELMO3Q96BJ8 720 aa14.34□□□□□ -0.11
CDH1-204ENST00000562118 MMS19Q96T76 1030 aa14.34□□□□□ -0.11
CDH1-204ENST00000562118 SYT15Q9BQS2 421 aa14.34□□□□□ -0.11
CDH1-204ENST00000562118 NDST4Q9H3R1 872 aa14.34□□□□□ -0.11
CDH1-204ENST00000562118 MMRN2Q9H8L6 949 aa14.34□□□□□ -0.11
CDH1-204ENST00000562118 FANCLQ9NW38 375 aa14.34□□□□□ -0.11
CDH1-204ENST00000562118 CNTN6Q9UQ52 1028 aa14.34□□□□□ -0.11
CDH1-204ENST00000562118 USP15Q9Y4E8 981 aaPredicted RBP14.34□□□□□ -0.11
CDH1-204ENST00000562118 INSL5Q9Y5Q6 135 aa14.34□□□□□ -0.11
CDH1-204ENST00000562118 ZNF638Q14966 1978 aaKnown RBP14.34□□□□□ -0.11
CDH1-204ENST00000562118 MYBPHLA2RUH7 354 aa14.33□□□□□ -0.12
CDH1-204ENST00000562118 SPATA31D3P0C874 917 aa14.33□□□□□ -0.12
CDH1-204ENST00000562118 ACO1P21399 889 aaKnown RBP14.33□□□□□ -0.12
CDH1-204ENST00000562118 ACAT1P24752 427 aaKnown RBP14.33□□□□□ -0.12
CDH1-204ENST00000562118 RAP1GAPP47736 663 aa14.33□□□□□ -0.12
CDH1-204ENST00000562118 ZNF165P49910 485 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms