RNA–Protein interactions for RNA: ENST00000562078.5

CLK3-206, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 2,455 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-206ENST00000562078 EMP3P54852 163 aa14.01□□□□□ -0.17
CLK3-206ENST00000562078 IL9RQ01113 521 aa14.01□□□□□ -0.17
CLK3-206ENST00000562078 TMEM259Q4ZIN3 620 aa14.01□□□□□ -0.17
CLK3-206ENST00000562078 C1orf186Q6ZWK4 172 aa14.01□□□□□ -0.17
CLK3-206ENST00000562078 SYCE1Q8N0S2 351 aa14.01□□□□□ -0.17
CLK3-206ENST00000562078 PPP1R14BQ96C90 147 aa14.01□□□□□ -0.17
CLK3-206ENST00000562078 FAM81BQ96LP2 452 aa14.01□□□□□ -0.17
CLK3-206ENST00000562078 PHF12Q96QT6 1004 aa14.01□□□□□ -0.17
CLK3-206ENST00000562078 BTBD10Q9BSF8 475 aa14.01□□□□□ -0.17
CLK3-206ENST00000562078 TRAF3IP3Q9Y228 551 aa14.01□□□□□ -0.17
CLK3-206ENST00000562078 PTPN22Q9Y2R2 807 aa14.01□□□□□ -0.17
CLK3-206ENST00000562078 ZNF862O60290 1169 aa14□□□□□ -0.17
CLK3-206ENST00000562078 GAP43P17677 238 aa14□□□□□ -0.17
CLK3-206ENST00000562078 BMT2Q1RMZ1 405 aa14□□□□□ -0.17
CLK3-206ENST00000562078 MOB2Q70IA6 237 aa14□□□□□ -0.17
CLK3-206ENST00000562078 CLNKQ7Z7G1 428 aa14□□□□□ -0.17
CLK3-206ENST00000562078 KCTD17Q8N5Z5 321 aa14□□□□□ -0.17
CLK3-206ENST00000562078 MYCT1Q8N699 235 aa14□□□□□ -0.17
CLK3-206ENST00000562078 RUNDC3BQ96NL0 473 aa14□□□□□ -0.17
CLK3-206ENST00000562078 FNBP1Q96RU3 617 aa14□□□□□ -0.17
CLK3-206ENST00000562078 GANQ9H2C0 597 aa14□□□□□ -0.17
CLK3-206ENST00000562078 IKZF4Q9H2S9 585 aa14□□□□□ -0.17
CLK3-206ENST00000562078 ELP3Q9H9T3 547 aa14□□□□□ -0.17
CLK3-206ENST00000562078 UBN1Q9NPG3 1134 aa14□□□□□ -0.17
CLK3-206ENST00000562078 OLFML3Q9NRN5 406 aa14□□□□□ -0.17
CLK3-206ENST00000562078 KCNH7Q9NS40 1196 aa14□□□□□ -0.17
CLK3-206ENST00000562078 TYW1Q9NV66 732 aaKnown RBP14□□□□□ -0.17
CLK3-206ENST00000562078 TMEM247A6NEH6 219 aa14□□□□□ -0.17
CLK3-206ENST00000562078 PDXKO00764 312 aa14□□□□□ -0.17
CLK3-206ENST00000562078 GYG2O15488 501 aa14□□□□□ -0.17
CLK3-206ENST00000562078 CALUO43852 315 aaPredicted RBP14□□□□□ -0.17
CLK3-206ENST00000562078 CCDC22O60826 627 aa14□□□□□ -0.17
CLK3-206ENST00000562078 NMT1P30419 496 aaKnown RBP14□□□□□ -0.17
CLK3-206ENST00000562078 VPS41P49754 854 aa14□□□□□ -0.17
CLK3-206ENST00000562078 KCNH2Q12809 1159 aa14□□□□□ -0.17
CLK3-206ENST00000562078 CDC16Q13042 620 aa14□□□□□ -0.17
CLK3-206ENST00000562078 B3GNT9Q6UX72 402 aa14□□□□□ -0.17
CLK3-206ENST00000562078 CCDC80Q76M96 950 aa14□□□□□ -0.17
CLK3-206ENST00000562078 NLRP9Q7RTR0 991 aa14□□□□□ -0.17
CLK3-206ENST00000562078 MCF2L2Q86YR7 1114 aa14□□□□□ -0.17
CLK3-206ENST00000562078 ALG3Q92685 438 aa14□□□□□ -0.17
CLK3-206ENST00000562078 MCUR1Q96AQ8 359 aa14□□□□□ -0.17
CLK3-206ENST00000562078 HSPBAP1Q96EW2 488 aa14□□□□□ -0.17
CLK3-206ENST00000562078 ABHD8Q96I13 439 aa14□□□□□ -0.17
CLK3-206ENST00000562078 ZNF408Q9H9D4 720 aa14□□□□□ -0.17
CLK3-206ENST00000562078 ARL8BQ9NVJ2 186 aa14□□□□□ -0.17
CLK3-206ENST00000562078 PTTG2Q9NZH5 202 aa14□□□□□ -0.17
CLK3-206ENST00000562078 AFG3L2Q9Y4W6 797 aa14□□□□□ -0.17
CLK3-206ENST00000562078 ZMYM2Q9UBW7 1377 aa14□□□□□ -0.17
CLK3-206ENST00000562078 CLIC2O15247 247 aa13.99□□□□□ -0.17
CLK3-206ENST00000562078 SPAG7O75391 227 aa13.99□□□□□ -0.17
CLK3-206ENST00000562078 PGM3O95394 542 aa13.99□□□□□ -0.17
CLK3-206ENST00000562078 NR3C1P04150 777 aa13.99□□□□□ -0.17
CLK3-206ENST00000562078 H2AFZP0C0S5 128 aa13.99□□□□□ -0.17
CLK3-206ENST00000562078 EIF2AK2P19525 551 aaKnown RBP13.99□□□□□ -0.17
CLK3-206ENST00000562078 EPHA7Q15375 998 aa13.99□□□□□ -0.17
CLK3-206ENST00000562078 ZNF568Q3ZCX4 644 aa13.99□□□□□ -0.17
CLK3-206ENST00000562078 MAP1SQ66K74 1059 aaPredicted RBP13.99□□□□□ -0.17
CLK3-206ENST00000562078 TRIM67Q6ZTA4 783 aa13.99□□□□□ -0.17
CLK3-206ENST00000562078 H2AFVQ71UI9 128 aa13.99□□□□□ -0.17
CLK3-206ENST00000562078 ANKRD13AQ8IZ07 590 aa13.99□□□□□ -0.17
CLK3-206ENST00000562078 ZDHHC14Q8IZN3 488 aa13.99□□□□□ -0.17
CLK3-206ENST00000562078 LRRC43Q8N309 656 aa13.99□□□□□ -0.17
CLK3-206ENST00000562078 CEP70Q8NHQ1 597 aa13.99□□□□□ -0.17
CLK3-206ENST00000562078 GAB3Q8WWW8 586 aa13.99□□□□□ -0.17
CLK3-206ENST00000562078 ART4Q93070 314 aa13.99□□□□□ -0.17
CLK3-206ENST00000562078 WNK4Q96J92 1243 aa13.99□□□□□ -0.17
CLK3-206ENST00000562078 NACC1Q96RE7 527 aa13.99□□□□□ -0.17
CLK3-206ENST00000562078 RIT2Q99578 217 aa13.99□□□□□ -0.17
CLK3-206ENST00000562078 PARVGQ9HBI0 331 aa13.99□□□□□ -0.17
CLK3-206ENST00000562078 BTBD7Q9P203 1132 aa13.99□□□□□ -0.17
CLK3-206ENST00000562078 EFR3BQ9Y2G0 817 aa13.99□□□□□ -0.17
CLK3-206ENST00000562078 ARID2Q68CP9 1835 aa13.99□□□□□ -0.17
CLK3-206ENST00000562078 CFAP69A5D8W1 941 aa13.99□□□□□ -0.17
CLK3-206ENST00000562078 VILLO15195 856 aa13.99□□□□□ -0.17
CLK3-206ENST00000562078 CAPN15O75808 1086 aa13.99□□□□□ -0.17
CLK3-206ENST00000562078 USP1O94782 785 aa13.99□□□□□ -0.17
CLK3-206ENST00000562078 RPS6P62753 249 aaKnown RBP13.99□□□□□ -0.17
CLK3-206ENST00000562078 TKFCQ3LXA3 575 aa13.99□□□□□ -0.17
CLK3-206ENST00000562078 DCAF17Q5H9S7 520 aaPredicted RBP13.99□□□□□ -0.17
CLK3-206ENST00000562078 TMEM53Q6P2H8 277 aa13.99□□□□□ -0.17
CLK3-206ENST00000562078 PPP1R21Q6ZMI0 780 aa13.99□□□□□ -0.17
CLK3-206ENST00000562078 MIER3Q7Z3K6 550 aa13.99□□□□□ -0.17
CLK3-206ENST00000562078 PRUNE1Q86TP1 453 aa13.99□□□□□ -0.17
CLK3-206ENST00000562078 VPS52Q8N1B4 723 aa13.99□□□□□ -0.17
CLK3-206ENST00000562078 PRELID2Q8N945 189 aa13.99□□□□□ -0.17
CLK3-206ENST00000562078 SYTL5Q8TDW5 730 aaPredicted RBP13.99□□□□□ -0.17
CLK3-206ENST00000562078 C12orf42Q96LP6 360 aa13.99□□□□□ -0.17
CLK3-206ENST00000562078 CYTH2Q99418 400 aa13.99□□□□□ -0.17
CLK3-206ENST00000562078 AAASQ9NRG9 546 aa13.99□□□□□ -0.17
CLK3-206ENST00000562078 PARP2Q9UGN5 583 aa13.99□□□□□ -0.17
CLK3-206ENST00000562078 GRID1Q9ULK0 1009 aa13.99□□□□□ -0.17
CLK3-206ENST00000562078 TMEM110-MUSTN1A8MSY1 372 aa13.98□□□□□ -0.17
CLK3-206ENST00000562078 PHF2O75151 1096 aa13.98□□□□□ -0.17
CLK3-206ENST00000562078 AKAP3O75969 853 aa13.98□□□□□ -0.17
CLK3-206ENST00000562078 BCRP11274 1271 aa13.98□□□□□ -0.17
CLK3-206ENST00000562078 CHKAP35790 457 aa13.98□□□□□ -0.17
CLK3-206ENST00000562078 RGS2P41220 211 aa13.98□□□□□ -0.17
CLK3-206ENST00000562078 CASP4P49662 377 aa13.98□□□□□ -0.17
CLK3-206ENST00000562078 MRPS9P82933 396 aaKnown RBP13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 108.3 ms