RNA–Protein interactions for RNA: ENST00000562045.1

SYNGR3-202, Transcript of synaptogyrin 3, humanhuman

TSL 2 BASIC

Gene SYNGR3, Length 1,743 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-202ENST00000562045 NOP14P78316 857 aaKnown RBP24.01■■□□□ 1.43
SYNGR3-202ENST00000562045 RBM10P98175 930 aaKnown RBP24.01■■□□□ 1.43
SYNGR3-202ENST00000562045 HYAL1Q12794 435 aa24.01■■□□□ 1.43
SYNGR3-202ENST00000562045 ARHGAP44Q17R89 818 aa24.01■■□□□ 1.43
SYNGR3-202ENST00000562045 RIN2Q8WYP3 895 aaPredicted RBP24.01■■□□□ 1.43
SYNGR3-202ENST00000562045 TTPALQ9BTX7 342 aa24.01■■□□□ 1.43
SYNGR3-202ENST00000562045 NGRNQ9NPE2 291 aaKnown RBP24.01■■□□□ 1.43
SYNGR3-202ENST00000562045 SOWAHDA6NJG2 315 aa24■■□□□ 1.43
SYNGR3-202ENST00000562045 NRIP1P48552 1158 aa24■■□□□ 1.43
SYNGR3-202ENST00000562045 MYL6P60660 151 aa24■■□□□ 1.43
SYNGR3-202ENST00000562045 ASIC2Q16515 512 aa24■■□□□ 1.43
SYNGR3-202ENST00000562045 LNX1Q8TBB1 728 aaPredicted RBP24■■□□□ 1.43
SYNGR3-202ENST00000562045 TATDN2Q93075 761 aa24■■□□□ 1.43
SYNGR3-202ENST00000562045 GTF3C5Q9Y5Q8 519 aaPredicted RBP24■■□□□ 1.43
SYNGR3-202ENST00000562045 IRAK3Q9Y616 596 aa24■■□□□ 1.43
SYNGR3-202ENST00000562045 M0QZQ0 153 aa23.99■■□□□ 1.43
SYNGR3-202ENST00000562045 URODP06132 367 aa23.99■■□□□ 1.43
SYNGR3-202ENST00000562045 CNPP09543 421 aaKnown RBP23.99■■□□□ 1.43
SYNGR3-202ENST00000562045 CCDC172P0C7W6 258 aa23.99■■□□□ 1.43
SYNGR3-202ENST00000562045 TBXAS1P24557 533 aaPredicted RBP23.99■■□□□ 1.43
SYNGR3-202ENST00000562045 SOX5P35711 763 aa23.99■■□□□ 1.43
SYNGR3-202ENST00000562045 ZNF699Q32M78 642 aa23.99■■□□□ 1.43
SYNGR3-202ENST00000562045 KIAA1841Q6NSI8 718 aa23.99■■□□□ 1.43
SYNGR3-202ENST00000562045 PDZRN4Q6ZMN7 1036 aaPredicted RBP23.99■■□□□ 1.43
SYNGR3-202ENST00000562045 MAFAQ8NHW3 353 aaPredicted RBP23.99■■□□□ 1.43
SYNGR3-202ENST00000562045 SENP8Q96LD8 212 aa23.99■■□□□ 1.43
SYNGR3-202ENST00000562045 CHP1Q99653 195 aa23.99■■□□□ 1.43
SYNGR3-202ENST00000562045 GPR88Q9GZN0 384 aa23.99■■□□□ 1.43
SYNGR3-202ENST00000562045 IGFLR1Q9H665 355 aa23.99■■□□□ 1.43
SYNGR3-202ENST00000562045 MRPL17Q9NRX2 175 aaKnown RBP23.99■■□□□ 1.43
SYNGR3-202ENST00000562045 LINC01565O15544 149 aa23.98■■□□□ 1.43
SYNGR3-202ENST00000562045 SERPING1P05155 500 aa23.98■■□□□ 1.43
SYNGR3-202ENST00000562045 FERP16591 822 aa23.98■■□□□ 1.43
SYNGR3-202ENST00000562045 ATICP31939 592 aa23.98■■□□□ 1.43
SYNGR3-202ENST00000562045 TAF6P49848 677 aa23.98■■□□□ 1.43
SYNGR3-202ENST00000562045 RBP5P82980 135 aa23.98■■□□□ 1.43
SYNGR3-202ENST00000562045 ELAVL2Q12926 359 aaKnown RBP23.98■■□□□ 1.43
SYNGR3-202ENST00000562045 SPOPLQ6IQ16 392 aa23.98■■□□□ 1.43
SYNGR3-202ENST00000562045 PDE12Q6L8Q7 609 aaKnown RBP23.98■■□□□ 1.43
SYNGR3-202ENST00000562045 RSPO2Q6UXX9 243 aaPredicted RBP23.98■■□□□ 1.43
SYNGR3-202ENST00000562045 KIAA1524Q8TCG1 905 aa23.98■■□□□ 1.43
SYNGR3-202ENST00000562045 JAKMIP2Q96AA8 810 aa23.98■■□□□ 1.43
SYNGR3-202ENST00000562045 KREMEN1Q96MU8 473 aa23.98■■□□□ 1.43
SYNGR3-202ENST00000562045 APOBEC3GQ9HC16 384 aaKnown RBP23.98■■□□□ 1.43
SYNGR3-202ENST00000562045 ADAM12O43184 909 aa23.98■■□□□ 1.43
SYNGR3-202ENST00000562045 TRAPPC3O43617 180 aa23.98■■□□□ 1.43
SYNGR3-202ENST00000562045 TDRD12Q587J7 1177 aaKnown RBP23.98■■□□□ 1.43
SYNGR3-202ENST00000562045 DSTYKQ6XUX3 929 aa23.98■■□□□ 1.43
SYNGR3-202ENST00000562045 GLYCTKQ8IVS8 523 aa23.98■■□□□ 1.43
SYNGR3-202ENST00000562045 VN1R2Q8NFZ6 395 aa23.98■■□□□ 1.43
SYNGR3-202ENST00000562045 SHC3Q92529 594 aa23.98■■□□□ 1.43
SYNGR3-202ENST00000562045 KAT5Q92993 513 aa23.98■■□□□ 1.43
SYNGR3-202ENST00000562045 KLHL5Q96PQ7 755 aa23.98■■□□□ 1.43
SYNGR3-202ENST00000562045 XYLT2Q9H1B5 865 aa23.98■■□□□ 1.43
SYNGR3-202ENST00000562045 ARHGAP20Q9P2F6 1191 aa23.98■■□□□ 1.43
SYNGR3-202ENST00000562045 BZW2Q9Y6E2 419 aaKnown RBP23.98■■□□□ 1.43
SYNGR3-202ENST00000562045 BRWD1Q9NSI6 2320 aa23.97■■□□□ 1.43
SYNGR3-202ENST00000562045 KPNA7A9QM74 516 aa23.97■■□□□ 1.43
SYNGR3-202ENST00000562045 ESPNB1AK53 854 aa23.97■■□□□ 1.43
SYNGR3-202ENST00000562045 TEX28O15482 410 aa23.97■■□□□ 1.43
SYNGR3-202ENST00000562045 ARID5AQ03989 594 aa23.97■■□□□ 1.43
SYNGR3-202ENST00000562045 KLHL30Q0D2K2 578 aa23.97■■□□□ 1.43
SYNGR3-202ENST00000562045 CUL2Q13617 745 aa23.97■■□□□ 1.43
SYNGR3-202ENST00000562045 VARS2Q5ST30 1063 aaKnown RBP23.97■■□□□ 1.43
SYNGR3-202ENST00000562045 HGSNATQ68CP4 663 aa23.97■■□□□ 1.43
SYNGR3-202ENST00000562045 CCDC170Q8IYT3 715 aa23.97■■□□□ 1.43
SYNGR3-202ENST00000562045 LRRC52Q8N7C0 313 aa23.97■■□□□ 1.43
SYNGR3-202ENST00000562045 PIK3R5Q8WYR1 880 aa23.97■■□□□ 1.43
SYNGR3-202ENST00000562045 FAXDC2Q96IV6 333 aa23.97■■□□□ 1.43
SYNGR3-202ENST00000562045 TLE6Q9H808 572 aa23.97■■□□□ 1.43
SYNGR3-202ENST00000562045 VRTNQ9H8Y1 702 aa23.97■■□□□ 1.43
SYNGR3-202ENST00000562045 NHEJ1Q9H9Q4 299 aaPredicted RBP23.97■■□□□ 1.43
SYNGR3-202ENST00000562045 PRDM6Q9NQX0 595 aa23.97■■□□□ 1.43
SYNGR3-202ENST00000562045 STK39Q9UEW8 545 aa23.97■■□□□ 1.43
SYNGR3-202ENST00000562045 PCDHB8Q9UN66 801 aa23.97■■□□□ 1.43
SYNGR3-202ENST00000562045 UNC80Q8N2C7 3258 aa23.97■■□□□ 1.43
SYNGR3-202ENST00000562045 SSU72P8A0A1W2PR75 194 aa23.96■■□□□ 1.43
SYNGR3-202ENST00000562045 FOXN3O00409 490 aaPredicted RBP23.96■■□□□ 1.43
SYNGR3-202ENST00000562045 CLASP2O75122 1294 aaKnown RBP23.96■■□□□ 1.43
SYNGR3-202ENST00000562045 PRKCIP41743 596 aa23.96■■□□□ 1.43
SYNGR3-202ENST00000562045 DUSP6Q16828 381 aa23.96■■□□□ 1.43
SYNGR3-202ENST00000562045 RAD9BQ6WBX8 426 aa23.96■■□□□ 1.43
SYNGR3-202ENST00000562045 IRF2BP2Q7Z5L9 587 aa23.96■■□□□ 1.43
SYNGR3-202ENST00000562045 HPDLQ96IR7 371 aa23.96■■□□□ 1.43
SYNGR3-202ENST00000562045 CCDC42Q96M95 316 aa23.96■■□□□ 1.43
SYNGR3-202ENST00000562045 CLSTN3Q9BQT9 956 aa23.96■■□□□ 1.43
SYNGR3-202ENST00000562045 NIF3L1Q9GZT8 377 aa23.96■■□□□ 1.43
SYNGR3-202ENST00000562045 RXFP1Q9HBX9 757 aa23.96■■□□□ 1.43
SYNGR3-202ENST00000562045 GFPT2O94808 682 aa23.96■■□□□ 1.43
SYNGR3-202ENST00000562045 STAU1O95793 577 aaKnown RBP23.96■■□□□ 1.43
SYNGR3-202ENST00000562045 PNMA6AP0CW24 399 aaPredicted RBP23.96■■□□□ 1.43
SYNGR3-202ENST00000562045 CYLC1P35663 651 aaPredicted RBP23.96■■□□□ 1.43
SYNGR3-202ENST00000562045 MRPL58Q14197 206 aaKnown RBP23.96■■□□□ 1.43
SYNGR3-202ENST00000562045 PSMD5Q16401 504 aa23.96■■□□□ 1.43
SYNGR3-202ENST00000562045 SV2CQ496J9 727 aa23.96■■□□□ 1.43
SYNGR3-202ENST00000562045 ZNF560Q96MR9 790 aa23.96■■□□□ 1.43
SYNGR3-202ENST00000562045 DEF6Q9H4E7 631 aa23.96■■□□□ 1.43
SYNGR3-202ENST00000562045 CYB561D2O14569 222 aa23.95■■□□□ 1.42
SYNGR3-202ENST00000562045 SYN3O14994 580 aa23.95■■□□□ 1.42
SYNGR3-202ENST00000562045 GLP2RO95838 553 aa23.95■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms