RNA–Protein interactions for RNA: ENST00000561947.5

SMG1-205, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 2,664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-205ENST00000561947 GNGT1P63211 74 aa10.38□□□□□ -0.75
SMG1-205ENST00000561947 CALCOCO2Q13137 446 aa10.38□□□□□ -0.75
SMG1-205ENST00000561947 PIGHQ14442 188 aaPredicted RBP10.38□□□□□ -0.75
SMG1-205ENST00000561947 ANKS1BQ7Z6G8 1248 aa10.38□□□□□ -0.75
SMG1-205ENST00000561947 RCOR2Q8IZ40 523 aa10.38□□□□□ -0.75
SMG1-205ENST00000561947 NIPA2Q8N8Q9 360 aa10.38□□□□□ -0.75
SMG1-205ENST00000561947 SLC4A11Q8NBS3 891 aa10.38□□□□□ -0.75
SMG1-205ENST00000561947 HPDLQ96IR7 371 aa10.38□□□□□ -0.75
SMG1-205ENST00000561947 RBM41Q96IZ5 413 aaKnown RBP10.38□□□□□ -0.75
SMG1-205ENST00000561947 TWNKQ96RR1 684 aa10.38□□□□□ -0.75
SMG1-205ENST00000561947 ELOVL4Q9GZR5 314 aa10.38□□□□□ -0.75
SMG1-205ENST00000561947 CENPHQ9H3R5 247 aa10.38□□□□□ -0.75
SMG1-205ENST00000561947 SETD4Q9NVD3 440 aa10.38□□□□□ -0.75
SMG1-205ENST00000561947 SLC5A4Q9NY91 659 aa10.38□□□□□ -0.75
SMG1-205ENST00000561947 FEZ2Q9UHY8 353 aaPredicted RBP10.38□□□□□ -0.75
SMG1-205ENST00000561947 CYTH4Q9UIA0 394 aa10.38□□□□□ -0.75
SMG1-205ENST00000561947 ITGA11Q9UKX5 1188 aa10.38□□□□□ -0.75
SMG1-205ENST00000561947 GRIN2DO15399 1336 aa10.38□□□□□ -0.75
SMG1-205ENST00000561947 F8VP50 259 aa10.38□□□□□ -0.75
SMG1-205ENST00000561947 EIF3HO15372 352 aaKnown RBP eCLIP10.38□□□□□ -0.751e-6■■■■□ 21.9
SMG1-205ENST00000561947 STAU1O95793 577 aaKnown RBP10.38□□□□□ -0.75
SMG1-205ENST00000561947 GAS8O95995 478 aa10.38□□□□□ -0.75
SMG1-205ENST00000561947 TCF4P15884 667 aa10.38□□□□□ -0.75
SMG1-205ENST00000561947 ATP1A2P50993 1020 aa10.38□□□□□ -0.75
SMG1-205ENST00000561947 PTPN11Q06124 597 aaPredicted RBP10.38□□□□□ -0.75
SMG1-205ENST00000561947 CCNG2Q16589 344 aa10.38□□□□□ -0.75
SMG1-205ENST00000561947 DCAF4L1Q3SXM0 396 aa10.38□□□□□ -0.75
SMG1-205ENST00000561947 DENND2CQ68D51 928 aa10.38□□□□□ -0.75
SMG1-205ENST00000561947 ATL2Q8NHH9 583 aa10.38□□□□□ -0.75
SMG1-205ENST00000561947 RNF25Q96BH1 459 aaPredicted RBP10.38□□□□□ -0.75
SMG1-205ENST00000561947 TMEM176AQ96HP8 235 aa10.38□□□□□ -0.75
SMG1-205ENST00000561947 SLITRK1Q96PX8 696 aa10.38□□□□□ -0.75
SMG1-205ENST00000561947 ADAMTS10Q9H324 1103 aa10.38□□□□□ -0.75
SMG1-205ENST00000561947 KLHL11Q9NVR0 708 aa10.38□□□□□ -0.75
SMG1-205ENST00000561947 HMGXB4Q9UGU5 601 aa10.38□□□□□ -0.75
SMG1-205ENST00000561947 ASIC3Q9UHC3 531 aa10.38□□□□□ -0.75
SMG1-205ENST00000561947 AGAP1Q9UPQ3 857 aa10.38□□□□□ -0.75
SMG1-205ENST00000561947 KRT1P04264 644 aa10.37□□□□□ -0.75
SMG1-205ENST00000561947 FGFR4P22455 802 aa10.37□□□□□ -0.75
SMG1-205ENST00000561947 GSCP56915 257 aaPredicted RBP10.37□□□□□ -0.75
SMG1-205ENST00000561947 RBP5P82980 135 aa10.37□□□□□ -0.75
SMG1-205ENST00000561947 IFFO1Q0D2I5 559 aa10.37□□□□□ -0.75
SMG1-205ENST00000561947 NFX1Q12986 1120 aaKnown RBP10.37□□□□□ -0.75
SMG1-205ENST00000561947 ORC1Q13415 861 aa10.37□□□□□ -0.75
SMG1-205ENST00000561947 SLMAPQ14BN4 828 aa10.37□□□□□ -0.75
SMG1-205ENST00000561947 KRT71Q3SY84 523 aa10.37□□□□□ -0.75
SMG1-205ENST00000561947 DOCK3Q8IZD9 2030 aa10.37□□□□□ -0.75
SMG1-205ENST00000561947 SNF8Q96H20 258 aa10.37□□□□□ -0.75
SMG1-205ENST00000561947 CCDC114Q96M63 670 aa10.37□□□□□ -0.75
SMG1-205ENST00000561947 DPP3Q9NY33 737 aa10.37□□□□□ -0.75
SMG1-205ENST00000561947 CWC15Q9P013 229 aaKnown RBP10.37□□□□□ -0.75
SMG1-205ENST00000561947 SIGLEC16A6NMB1 481 aa10.37□□□□□ -0.75
SMG1-205ENST00000561947 GOLGA8SH3BPF8 625 aa10.37□□□□□ -0.75
SMG1-205ENST00000561947 RARGP13631 454 aa10.37□□□□□ -0.75
SMG1-205ENST00000561947 ITIH2P19823 946 aa10.37□□□□□ -0.75
SMG1-205ENST00000561947 KIZQ2M2Z5 673 aa10.37□□□□□ -0.75
SMG1-205ENST00000561947 ATP13A4Q4VNC1 1196 aa10.37□□□□□ -0.75
SMG1-205ENST00000561947 MORN1Q5T089 497 aa10.37□□□□□ -0.75
SMG1-205ENST00000561947 ARFGAP2Q8N6H7 521 aa10.37□□□□□ -0.75
SMG1-205ENST00000561947 KIF12Q96FN5 646 aa10.37□□□□□ -0.75
SMG1-205ENST00000561947 FAM124BQ9H5Z6 455 aaPredicted RBP10.37□□□□□ -0.75
SMG1-205ENST00000561947 WDR35Q9P2L0 1181 aa10.37□□□□□ -0.75
SMG1-205ENST00000561947 TJP2Q9UDY2 1190 aa10.37□□□□□ -0.75
SMG1-205ENST00000561947 CPA4Q9UI42 421 aa10.37□□□□□ -0.75
SMG1-205ENST00000561947 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.37□□□□□ -0.75
SMG1-205ENST00000561947 GNEQ9Y223 722 aaKnown RBP10.37□□□□□ -0.75
SMG1-205ENST00000561947 A6NJR5 290 aa10.36□□□□□ -0.75
SMG1-205ENST00000561947 PI4K2BG5E9Z4 385 aa10.36□□□□□ -0.75
SMG1-205ENST00000561947 TP73O15350 636 aa10.36□□□□□ -0.75
SMG1-205ENST00000561947 DYNC1LI2O43237 492 aaPredicted RBP10.36□□□□□ -0.75
SMG1-205ENST00000561947 MICAL2O94851 1124 aa10.36□□□□□ -0.75
SMG1-205ENST00000561947 NPTXRO95502 500 aa10.36□□□□□ -0.75
SMG1-205ENST00000561947 F2P00734 622 aa10.36□□□□□ -0.75
SMG1-205ENST00000561947 SMIM10L2AP0DMW4 78 aa10.36□□□□□ -0.75
SMG1-205ENST00000561947 SMIM10L2BP0DMW5 78 aa10.36□□□□□ -0.75
SMG1-205ENST00000561947 VDRP11473 427 aa10.36□□□□□ -0.75
SMG1-205ENST00000561947 IVDP26440 423 aa10.36□□□□□ -0.75
SMG1-205ENST00000561947 PTPN7P35236 360 aa10.36□□□□□ -0.75
SMG1-205ENST00000561947 COPS2P61201 443 aa10.36□□□□□ -0.75
SMG1-205ENST00000561947 PSMC1P62191 440 aaKnown RBP10.36□□□□□ -0.75
SMG1-205ENST00000561947 CDC42EP1Q00587 391 aa10.36□□□□□ -0.75
SMG1-205ENST00000561947 INCA1Q0VD86 236 aa10.36□□□□□ -0.75
SMG1-205ENST00000561947 MAP2K5Q13163 448 aa10.36□□□□□ -0.75
SMG1-205ENST00000561947 PDCLQ13371 301 aa10.36□□□□□ -0.75
SMG1-205ENST00000561947 IRF5Q13568 498 aa10.36□□□□□ -0.75
SMG1-205ENST00000561947 PRAMEF19Q5SWL8 479 aa10.36□□□□□ -0.75
SMG1-205ENST00000561947 ZFYVE27Q5T4F4 411 aa10.36□□□□□ -0.75
SMG1-205ENST00000561947 TTC19Q6DKK2 380 aaPredicted RBP10.36□□□□□ -0.75
SMG1-205ENST00000561947 RHBDF2Q6PJF5 856 aa10.36□□□□□ -0.75
SMG1-205ENST00000561947 SPOCD1Q6ZMY3 1216 aa10.36□□□□□ -0.75
SMG1-205ENST00000561947 APBB1IPQ7Z5R6 666 aaPredicted RBP10.36□□□□□ -0.75
SMG1-205ENST00000561947 HOOK3Q86VS8 718 aa10.36□□□□□ -0.75
SMG1-205ENST00000561947 XYLT1Q86Y38 959 aa10.36□□□□□ -0.75
SMG1-205ENST00000561947 CPXM1Q96SM3 734 aa10.36□□□□□ -0.75
SMG1-205ENST00000561947 GCOM2Q9BZD3 368 aaPredicted RBP10.36□□□□□ -0.75
SMG1-205ENST00000561947 FAM49AQ9H0Q0 323 aaPredicted RBP10.36□□□□□ -0.75
SMG1-205ENST00000561947 SEMA4AQ9H3S1 761 aa10.36□□□□□ -0.75
SMG1-205ENST00000561947 LRRC4CQ9HCJ2 640 aa10.36□□□□□ -0.75
SMG1-205ENST00000561947 DDX56Q9NY93 547 aaKnown RBP10.36□□□□□ -0.75
SMG1-205ENST00000561947 BCCIPQ9P287 314 aaKnown RBP eCLIP10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms