RNA–Protein interactions for RNA: ENST00000561393.5

AP4E1-205, Transcript of adaptor related protein complex 4 subunit epsilon 1, humanhuman

TSL 1 (best)

Gene AP4E1, Length 4,024 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1-205ENST00000561393 GNL1P36915 607 aaPredicted RBP17.23■□□□□ 0.35
AP4E1-205ENST00000561393 HELQQ8TDG4 1101 aa17.23■□□□□ 0.35
AP4E1-205ENST00000561393 TMEM176AQ96HP8 235 aa17.23■□□□□ 0.35
AP4E1-205ENST00000561393 RBM15Q96T37 977 aaKnown RBP eCLIP17.23■□□□□ 0.35
AP4E1-205ENST00000561393 TRAIPQ9BWF2 469 aa17.23■□□□□ 0.35
AP4E1-205ENST00000561393 CNOT10Q9H9A5 744 aaKnown RBP17.23■□□□□ 0.35
AP4E1-205ENST00000561393 COMMD10Q9Y6G5 202 aa17.23■□□□□ 0.35
AP4E1-205ENST00000561393 COL5A3P25940 1745 aaPredicted RBP17.23■□□□□ 0.35
AP4E1-205ENST00000561393 CD4P01730 458 aa17.22■□□□□ 0.35
AP4E1-205ENST00000561393 UBQLN1Q9UMX0 589 aaKnown RBP17.22■□□□□ 0.35
AP4E1-205ENST00000561393 CST3P01034 146 aaPredicted RBP17.22■□□□□ 0.35
AP4E1-205ENST00000561393 RARAP10276 462 aa17.22■□□□□ 0.35
AP4E1-205ENST00000561393 RBP3P10745 1247 aa17.22■□□□□ 0.35
AP4E1-205ENST00000561393 LRRC14Q15048 493 aa17.22■□□□□ 0.35
AP4E1-205ENST00000561393 TRADDQ15628 312 aa17.22■□□□□ 0.35
AP4E1-205ENST00000561393 LONRF1Q17RB8 773 aa17.22■□□□□ 0.35
AP4E1-205ENST00000561393 DCAF4L1Q3SXM0 396 aa17.22■□□□□ 0.35
AP4E1-205ENST00000561393 ANKMY2Q8IV38 441 aa17.22■□□□□ 0.35
AP4E1-205ENST00000561393 DNAAF3Q8N9W5 541 aa17.22■□□□□ 0.35
AP4E1-205ENST00000561393 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.22■□□□□ 0.35
AP4E1-205ENST00000561393 RASA4BC9J798 803 aa17.22■□□□□ 0.35
AP4E1-205ENST00000561393 RASA4O43374 803 aa17.22■□□□□ 0.35
AP4E1-205ENST00000561393 ARIH2O95376 493 aa17.22■□□□□ 0.35
AP4E1-205ENST00000561393 ITIH2P19823 946 aa17.22■□□□□ 0.35
AP4E1-205ENST00000561393 ARL2P36404 184 aa17.22■□□□□ 0.35
AP4E1-205ENST00000561393 C1QBPQ07021 282 aaKnown RBP17.22■□□□□ 0.35
AP4E1-205ENST00000561393 STILQ15468 1287 aa17.22■□□□□ 0.35
AP4E1-205ENST00000561393 FYB2Q5VWT5 728 aa17.22■□□□□ 0.35
AP4E1-205ENST00000561393 TSEN2Q8NCE0 465 aaKnown RBP17.22■□□□□ 0.35
AP4E1-205ENST00000561393 NIFKQ9BYG3 293 aaKnown RBP17.22■□□□□ 0.35
AP4E1-205ENST00000561393 WDR91A4D1P6 747 aa17.21■□□□□ 0.35
AP4E1-205ENST00000561393 NDST1P52848 882 aa17.21■□□□□ 0.35
AP4E1-205ENST00000561393 STAP1Q9ULZ2 295 aa17.21■□□□□ 0.35
AP4E1-205ENST00000561393 PPP1R37O75864 691 aa17.21■□□□□ 0.35
AP4E1-205ENST00000561393 VDRP11473 427 aa17.21■□□□□ 0.35
AP4E1-205ENST00000561393 FNTAP49354 379 aa17.21■□□□□ 0.35
AP4E1-205ENST00000561393 MXRA7P84157 204 aa17.21■□□□□ 0.35
AP4E1-205ENST00000561393 ROR1Q01973 937 aa17.21■□□□□ 0.35
AP4E1-205ENST00000561393 MAP3K10Q02779 954 aa17.21■□□□□ 0.35
AP4E1-205ENST00000561393 LRFN2Q9ULH4 789 aa17.21■□□□□ 0.35
AP4E1-205ENST00000561393 RRP15Q9Y3B9 282 aaKnown RBP17.21■□□□□ 0.35
AP4E1-205ENST00000561393 PCDHA3Q9Y5H8 950 aa17.21■□□□□ 0.35
AP4E1-205ENST00000561393 UMODL1Q5DID0 1318 aa17.21■□□□□ 0.35
AP4E1-205ENST00000561393 RGS20O76081 388 aa17.21■□□□□ 0.35
AP4E1-205ENST00000561393 SMAD1Q15797 465 aaKnown RBP17.21■□□□□ 0.35
AP4E1-205ENST00000561393 PAN2Q504Q3 1202 aaKnown RBP17.21■□□□□ 0.35
AP4E1-205ENST00000561393 SPATA18Q8TC71 538 aa17.21■□□□□ 0.35
AP4E1-205ENST00000561393 SREK1Q8WXA9 508 aaKnown RBP17.21■□□□□ 0.35
AP4E1-205ENST00000561393 ASB7Q9H672 318 aa17.21■□□□□ 0.35
AP4E1-205ENST00000561393 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.21■□□□□ 0.35
AP4E1-205ENST00000561393 MYH8P13535 1937 aa17.2■□□□□ 0.34
AP4E1-205ENST00000561393 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.2■□□□□ 0.34
AP4E1-205ENST00000561393 BTNL10A8MVZ5 291 aa17.2■□□□□ 0.34
AP4E1-205ENST00000561393 MAP2K7O14733 419 aa17.2■□□□□ 0.34
AP4E1-205ENST00000561393 GPD1P21695 349 aa17.2■□□□□ 0.34
AP4E1-205ENST00000561393 TAF6P49848 677 aa17.2■□□□□ 0.34
AP4E1-205ENST00000561393 ITKQ08881 620 aa17.2■□□□□ 0.34
AP4E1-205ENST00000561393 IQSEC1Q6DN90 963 aa17.2■□□□□ 0.34
AP4E1-205ENST00000561393 RWDD4Q6NW29 188 aaKnown RBP17.2■□□□□ 0.34
AP4E1-205ENST00000561393 CEP57Q86XR8 500 aa17.2■□□□□ 0.34
AP4E1-205ENST00000561393 AENQ8WTP8 325 aaKnown RBP17.2■□□□□ 0.34
AP4E1-205ENST00000561393 SMYD3Q9H7B4 428 aa17.2■□□□□ 0.34
AP4E1-205ENST00000561393 TNFSF13BQ9Y275 285 aa17.2■□□□□ 0.34
AP4E1-205ENST00000561393 CAPN7Q9Y6W3 813 aa17.2■□□□□ 0.34
AP4E1-205ENST00000561393 COL2A1P02458 1487 aaPredicted RBP17.2■□□□□ 0.34
AP4E1-205ENST00000561393 PSTPIP1O43586 416 aa17.2■□□□□ 0.34
AP4E1-205ENST00000561393 BRAFP15056 766 aa17.2■□□□□ 0.34
AP4E1-205ENST00000561393 CCDC110Q8TBZ0 833 aa17.2■□□□□ 0.34
AP4E1-205ENST00000561393 PLEKHO2Q8TD55 490 aa17.2■□□□□ 0.34
AP4E1-205ENST00000561393 HES6Q96HZ4 224 aa17.2■□□□□ 0.34
AP4E1-205ENST00000561393 KLC2Q9H0B6 622 aa17.2■□□□□ 0.34
AP4E1-205ENST00000561393 F8VP50 259 aa17.2■□□□□ 0.34
AP4E1-205ENST00000561393 SAT1P21673 171 aa17.2■□□□□ 0.34
AP4E1-205ENST00000561393 IL9RQ01113 521 aa17.2■□□□□ 0.34
AP4E1-205ENST00000561393 NUGGCQ68CJ6 796 aa17.2■□□□□ 0.34
AP4E1-205ENST00000561393 LRRC8CQ8TDW0 803 aa17.2■□□□□ 0.34
AP4E1-205ENST00000561393 ZNF518BQ9C0D4 1074 aa17.2■□□□□ 0.34
AP4E1-205ENST00000561393 KLHL14Q9P2G3 628 aa17.2■□□□□ 0.34
AP4E1-205ENST00000561393 RAET1EQ8TD07 263 aa17.19■□□□□ 0.34
AP4E1-205ENST00000561393 RNF139Q8WU17 664 aa17.19■□□□□ 0.34
AP4E1-205ENST00000561393 NCANO14594 1321 aa17.19■□□□□ 0.34
AP4E1-205ENST00000561393 CES2O00748 559 aa17.19■□□□□ 0.34
AP4E1-205ENST00000561393 LSM8O95777 96 aaKnown RBP17.19■□□□□ 0.34
AP4E1-205ENST00000561393 ASS1P00966 412 aaKnown RBP17.19■□□□□ 0.34
AP4E1-205ENST00000561393 ARF4P18085 180 aaPredicted RBP17.19■□□□□ 0.34
AP4E1-205ENST00000561393 TTC31Q49AM3 519 aaPredicted RBP17.19■□□□□ 0.34
AP4E1-205ENST00000561393 GPATCH2LQ9NWQ4 482 aa17.19■□□□□ 0.34
AP4E1-205ENST00000561393 TSPAN16Q9UKR8 245 aa17.19■□□□□ 0.34
AP4E1-205ENST00000561393 COG5Q9UP83 839 aa17.19■□□□□ 0.34
AP4E1-205ENST00000561393 NEU2Q9Y3R4 380 aa17.19■□□□□ 0.34
AP4E1-205ENST00000561393 MT-ND3P03897 115 aa17.19■□□□□ 0.34
AP4E1-205ENST00000561393 THPOP40225 353 aa17.19■□□□□ 0.34
AP4E1-205ENST00000561393 MFSD10Q14728 455 aa17.19■□□□□ 0.34
AP4E1-205ENST00000561393 ATP13A4Q4VNC1 1196 aa17.19■□□□□ 0.34
AP4E1-205ENST00000561393 CCDC197Q8NCU1 140 aa17.19■□□□□ 0.34
AP4E1-205ENST00000561393 SHCBP1Q8NEM2 672 aa17.19■□□□□ 0.34
AP4E1-205ENST00000561393 NSMCE1Q8WV22 266 aa17.19■□□□□ 0.34
AP4E1-205ENST00000561393 THOC1Q96FV9 657 aaKnown RBP17.19■□□□□ 0.34
AP4E1-205ENST00000561393 NCAPGQ9BPX3 1015 aa17.19■□□□□ 0.34
AP4E1-205ENST00000561393 SIK2Q9H0K1 926 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms