RNA–Protein interactions for RNA: ENST00000560983.1

HERC1-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-211ENST00000560983 EPHA5P54756 1037 aa4.52□□□□□ -1.69
HERC1-211ENST00000560983 CALD1Q05682 793 aaKnown RBP4.52□□□□□ -1.69
HERC1-211ENST00000560983 RBL2Q08999 1139 aa4.52□□□□□ -1.69
HERC1-211ENST00000560983 NTRK3Q16288 839 aa4.52□□□□□ -1.69
HERC1-211ENST00000560983 PTGISQ16647 500 aa4.52□□□□□ -1.69
HERC1-211ENST00000560983 FAM47CQ5HY64 1035 aa4.52□□□□□ -1.69
HERC1-211ENST00000560983 SLFN13Q68D06 897 aa4.52□□□□□ -1.69
HERC1-211ENST00000560983 CRIP3Q6Q6R5 217 aa4.52□□□□□ -1.69
HERC1-211ENST00000560983 TMC5Q6UXY8 1006 aa4.52□□□□□ -1.69
HERC1-211ENST00000560983 LRRC8DQ7L1W4 858 aa4.52□□□□□ -1.69
HERC1-211ENST00000560983 MYOCDQ8IZQ8 938 aa4.52□□□□□ -1.69
HERC1-211ENST00000560983 FAM133AQ8N9E0 248 aa4.52□□□□□ -1.69
HERC1-211ENST00000560983 SPATA5Q8NB90 893 aa4.52□□□□□ -1.69
HERC1-211ENST00000560983 CHST13Q8NET6 341 aa4.52□□□□□ -1.69
HERC1-211ENST00000560983 NUDT10Q8NFP7 164 aa4.52□□□□□ -1.69
HERC1-211ENST00000560983 VN1R2Q8NFZ6 395 aa4.52□□□□□ -1.69
HERC1-211ENST00000560983 PIP4K2CQ8TBX8 421 aa4.52□□□□□ -1.69
HERC1-211ENST00000560983 CAGE1Q8TC20 777 aa4.52□□□□□ -1.69
HERC1-211ENST00000560983 ATP8B4Q8TF62 1192 aa4.52□□□□□ -1.69
HERC1-211ENST00000560983 NUDT11Q96G61 164 aa4.52□□□□□ -1.69
HERC1-211ENST00000560983 AJUBAQ96IF1 538 aa4.52□□□□□ -1.69
HERC1-211ENST00000560983 ZFYVE21Q9BQ24 234 aa4.52□□□□□ -1.69
HERC1-211ENST00000560983 IER2Q9BTL4 223 aa4.52□□□□□ -1.69
HERC1-211ENST00000560983 PHF20Q9BVI0 1012 aa4.52□□□□□ -1.69
HERC1-211ENST00000560983 VCPKMTQ9H867 229 aa4.52□□□□□ -1.69
HERC1-211ENST00000560983 RAI14Q9P0K7 980 aa4.52□□□□□ -1.69
HERC1-211ENST00000560983 CROTQ9UKG9 612 aa4.52□□□□□ -1.69
HERC1-211ENST00000560983 ANGPTL2Q9UKU9 493 aa4.52□□□□□ -1.69
HERC1-211ENST00000560983 TELO2Q9Y4R8 837 aa4.52□□□□□ -1.69
HERC1-211ENST00000560983 LOC101059915A0A1B0GWI6 518 aaPredicted RBP4.51□□□□□ -1.69
HERC1-211ENST00000560983 SLC27A2O14975 620 aa4.51□□□□□ -1.69
HERC1-211ENST00000560983 ATP2A1O14983 1001 aa4.51□□□□□ -1.69
HERC1-211ENST00000560983 WDR46O15213 610 aaKnown RBP4.51□□□□□ -1.69
HERC1-211ENST00000560983 PARNO95453 639 aaKnown RBP4.51□□□□□ -1.69
HERC1-211ENST00000560983 CNOT4O95628 575 aaKnown RBP4.51□□□□□ -1.69
HERC1-211ENST00000560983 KNG1P01042 644 aa4.51□□□□□ -1.69
HERC1-211ENST00000560983 MMP1P03956 469 aa4.51□□□□□ -1.69
HERC1-211ENST00000560983 AMHP03971 560 aa4.51□□□□□ -1.69
HERC1-211ENST00000560983 MYL3P08590 195 aa4.51□□□□□ -1.69
HERC1-211ENST00000560983 SP9P0CG40 484 aa4.51□□□□□ -1.69
HERC1-211ENST00000560983 FGFR1P11362 822 aa4.51□□□□□ -1.69
HERC1-211ENST00000560983 FAHP16930 419 aa4.51□□□□□ -1.69
HERC1-211ENST00000560983 NRIP1P48552 1158 aa4.51□□□□□ -1.69
HERC1-211ENST00000560983 DYNLL1P63167 89 aaKnown RBP4.51□□□□□ -1.69
HERC1-211ENST00000560983 KCNC3Q14003 757 aa4.51□□□□□ -1.69
HERC1-211ENST00000560983 DDR2Q16832 855 aa4.51□□□□□ -1.69
HERC1-211ENST00000560983 TRIM71Q2Q1W2 868 aaKnown RBP4.51□□□□□ -1.69
HERC1-211ENST00000560983 DUSP28Q4G0W2 176 aa4.51□□□□□ -1.69
HERC1-211ENST00000560983 SOWAHCQ53LP3 525 aaPredicted RBP4.51□□□□□ -1.69
HERC1-211ENST00000560983 SNRNP48Q6IEG0 339 aaKnown RBP4.51□□□□□ -1.69
HERC1-211ENST00000560983 SLC4A10Q6U841 1118 aa4.51□□□□□ -1.69
HERC1-211ENST00000560983 ARHGEF18Q6ZSZ5 1173 aa4.51□□□□□ -1.69
HERC1-211ENST00000560983 CIR1Q86X95 450 aaPredicted RBP4.51□□□□□ -1.69
HERC1-211ENST00000560983 MAML2Q8IZL2 1156 aaPredicted RBP4.51□□□□□ -1.69
HERC1-211ENST00000560983 ANKRD35Q8N283 1001 aa4.51□□□□□ -1.69
HERC1-211ENST00000560983 SLC16A11Q8NCK7 471 aa4.51□□□□□ -1.69
HERC1-211ENST00000560983 DBF4BQ8NFT6 615 aa4.51□□□□□ -1.69
HERC1-211ENST00000560983 SPPL3Q8TCT6 385 aa4.51□□□□□ -1.69
HERC1-211ENST00000560983 DCAF4Q8WV16 495 aa4.51□□□□□ -1.69
HERC1-211ENST00000560983 RIN2Q8WYP3 895 aaPredicted RBP4.51□□□□□ -1.69
HERC1-211ENST00000560983 OSBP2Q969R2 916 aa4.51□□□□□ -1.69
HERC1-211ENST00000560983 YME1L1Q96TA2 773 aa4.51□□□□□ -1.69
HERC1-211ENST00000560983 RTP3Q9BQQ7 232 aa4.51□□□□□ -1.69
HERC1-211ENST00000560983 JAM3Q9BX67 310 aa4.51□□□□□ -1.69
HERC1-211ENST00000560983 TEX13BQ9BXU2 312 aa4.51□□□□□ -1.69
HERC1-211ENST00000560983 KLC2Q9H0B6 622 aa4.51□□□□□ -1.69
HERC1-211ENST00000560983 USP44Q9H0E7 712 aa4.51□□□□□ -1.69
HERC1-211ENST00000560983 MFSD1Q9H3U5 465 aa4.51□□□□□ -1.69
HERC1-211ENST00000560983 SEC61A2Q9H9S3 476 aa4.51□□□□□ -1.69
HERC1-211ENST00000560983 ARHGEF4Q9NR80 690 aa4.51□□□□□ -1.69
HERC1-211ENST00000560983 KCND1Q9NSA2 647 aa4.51□□□□□ -1.69
HERC1-211ENST00000560983 FTSJ1Q9UET6 329 aa4.51□□□□□ -1.69
HERC1-211ENST00000560983 SIPA1L1O43166 1804 aa4.51□□□□□ -1.69
HERC1-211ENST00000560983 IL16Q14005 1332 aa4.5□□□□□ -1.69
HERC1-211ENST00000560983 NBEAQ8NFP9 2946 aa4.5□□□□□ -1.69
HERC1-211ENST00000560983 NPEPPSL1A6NEC2 478 aa4.5□□□□□ -1.69
HERC1-211ENST00000560983 C2CD4DB7Z1M9 353 aa4.5□□□□□ -1.69
HERC1-211ENST00000560983 AGRPO00253 132 aa4.5□□□□□ -1.69
HERC1-211ENST00000560983 SLC30A4O14863 429 aa4.5□□□□□ -1.69
HERC1-211ENST00000560983 CSPG5O95196 566 aa4.5□□□□□ -1.69
HERC1-211ENST00000560983 TCF3P15923 654 aa4.5□□□□□ -1.69
HERC1-211ENST00000560983 TACR2P21452 398 aa4.5□□□□□ -1.69
HERC1-211ENST00000560983 SP100P23497 879 aaPredicted RBP4.5□□□□□ -1.69
HERC1-211ENST00000560983 GRK2P25098 689 aa4.5□□□□□ -1.69
HERC1-211ENST00000560983 CSF2RBP32927 897 aa4.5□□□□□ -1.69
HERC1-211ENST00000560983 CTNNB1P35222 781 aa4.5□□□□□ -1.69
HERC1-211ENST00000560983 GRK3P35626 688 aa4.5□□□□□ -1.69
HERC1-211ENST00000560983 ACVRL1P37023 503 aa4.5□□□□□ -1.69
HERC1-211ENST00000560983 IL15P40933 162 aaPredicted RBP4.5□□□□□ -1.69
HERC1-211ENST00000560983 ARID5AQ03989 594 aa4.5□□□□□ -1.69
HERC1-211ENST00000560983 GNL2Q13823 731 aaKnown RBP4.5□□□□□ -1.69
HERC1-211ENST00000560983 PAN2Q504Q3 1202 aaKnown RBP4.5□□□□□ -1.69
HERC1-211ENST00000560983 PLEKHG4Q58EX7 1191 aa4.5□□□□□ -1.69
HERC1-211ENST00000560983 ZNF618Q5T7W0 954 aa4.5□□□□□ -1.69
HERC1-211ENST00000560983 N4BP2L1Q5TBK1 243 aaPredicted RBP4.5□□□□□ -1.69
HERC1-211ENST00000560983 VASNQ6EMK4 673 aa4.5□□□□□ -1.69
HERC1-211ENST00000560983 NAA16Q6N069 864 aaPredicted RBP4.5□□□□□ -1.69
HERC1-211ENST00000560983 TRMT10BQ6PF06 316 aaKnown RBP4.5□□□□□ -1.69
HERC1-211ENST00000560983 SYCE2Q6PIF2 218 aa4.5□□□□□ -1.69
HERC1-211ENST00000560983 TMEM184AQ6ZMB5 413 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms