RNA–Protein interactions for RNA: ENST00000560959.5

TPM1-226, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-226ENST00000560959 MGAT5BQ3V5L5 792 aa20.09■□□□□ 0.81
TPM1-226ENST00000560959 TMEM130Q8N3G9 435 aa20.09■□□□□ 0.81
TPM1-226ENST00000560959 SYT2Q8N9I0 419 aaPredicted RBP20.09■□□□□ 0.81
TPM1-226ENST00000560959 SPPL2BQ8TCT7 592 aa20.09■□□□□ 0.81
TPM1-226ENST00000560959 SEPT5Q99719 369 aaPredicted RBP20.09■□□□□ 0.81
TPM1-226ENST00000560959 LLPHQ9BRT6 129 aaKnown RBP20.09■□□□□ 0.81
TPM1-226ENST00000560959 SMOC1Q9H4F8 434 aa20.09■□□□□ 0.81
TPM1-226ENST00000560959 RPF1Q9H9Y2 349 aaKnown RBP20.09■□□□□ 0.81
TPM1-226ENST00000560959 TDP1Q9NUW8 608 aa20.09■□□□□ 0.81
TPM1-226ENST00000560959 LARSQ9P2J5 1176 aaKnown RBP20.09■□□□□ 0.81
TPM1-226ENST00000560959 TBX20Q9UMR3 447 aa20.09■□□□□ 0.81
TPM1-226ENST00000560959 WASF3Q9UPY6 502 aa20.09■□□□□ 0.81
TPM1-226ENST00000560959 OTOL1A6NHN0 477 aaPredicted RBP20.08■□□□□ 0.81
TPM1-226ENST00000560959 PIRO00625 290 aa20.08■□□□□ 0.81
TPM1-226ENST00000560959 FAM189A1O60320 539 aa20.08■□□□□ 0.81
TPM1-226ENST00000560959 CAVIN2O95810 425 aa20.08■□□□□ 0.81
TPM1-226ENST00000560959 EGFP01133 1207 aa20.08■□□□□ 0.81
TPM1-226ENST00000560959 CDC25AP30304 524 aa20.08■□□□□ 0.81
TPM1-226ENST00000560959 TNFSF9P41273 254 aa20.08■□□□□ 0.81
TPM1-226ENST00000560959 NOVA1P51513 510 aaKnown RBP20.08■□□□□ 0.81
TPM1-226ENST00000560959 GALK1P51570 392 aa20.08■□□□□ 0.81
TPM1-226ENST00000560959 ST3GAL1Q11201 340 aa20.08■□□□□ 0.81
TPM1-226ENST00000560959 ZNF268Q14587 947 aaPredicted RBP20.08■□□□□ 0.81
TPM1-226ENST00000560959 PDGFRLQ15198 375 aa20.08■□□□□ 0.81
TPM1-226ENST00000560959 ENOX2Q16206 610 aaKnown RBP20.08■□□□□ 0.81
TPM1-226ENST00000560959 SLC39A12Q504Y0 691 aa20.08■□□□□ 0.81
TPM1-226ENST00000560959 HYIQ5T013 277 aa20.08■□□□□ 0.81
TPM1-226ENST00000560959 KCNK18Q7Z418 384 aa20.08■□□□□ 0.81
TPM1-226ENST00000560959 C11orf74Q86VG3 221 aa20.08■□□□□ 0.81
TPM1-226ENST00000560959 OR10T2Q8NGX3 314 aa20.08■□□□□ 0.81
TPM1-226ENST00000560959 USP13Q92995 863 aaPredicted RBP20.08■□□□□ 0.81
TPM1-226ENST00000560959 MMTAG2Q9BU76 263 aaKnown RBP20.08■□□□□ 0.81
TPM1-226ENST00000560959 EDEM2Q9BV94 578 aa20.08■□□□□ 0.81
TPM1-226ENST00000560959 EBF3Q9H4W6 596 aa20.08■□□□□ 0.81
TPM1-226ENST00000560959 RALYQ9UKM9 306 aaKnown RBP20.08■□□□□ 0.81
TPM1-226ENST00000560959 ZMIZ1Q9ULJ6 1067 aa20.08■□□□□ 0.81
TPM1-226ENST00000560959 DERAQ9Y315 318 aa20.08■□□□□ 0.81
TPM1-226ENST00000560959 ANO9A1A5B4 782 aa20.07■□□□□ 0.8
TPM1-226ENST00000560959 C1QTNF9BB2RNN3 333 aa20.07■□□□□ 0.8
TPM1-226ENST00000560959 OGTO15294 1046 aa20.07■□□□□ 0.8
TPM1-226ENST00000560959 APBB3O95704 486 aa20.07■□□□□ 0.8
TPM1-226ENST00000560959 F11P03951 625 aa20.07■□□□□ 0.8
TPM1-226ENST00000560959 C1QTNF9P0C862 333 aa20.07■□□□□ 0.8
TPM1-226ENST00000560959 NEK4P51957 841 aa20.07■□□□□ 0.8
TPM1-226ENST00000560959 NCKAP1LP55160 1127 aa20.07■□□□□ 0.8
TPM1-226ENST00000560959 BFSP1Q12934 665 aa20.07■□□□□ 0.8
TPM1-226ENST00000560959 GNL2Q13823 731 aaKnown RBP20.07■□□□□ 0.8
TPM1-226ENST00000560959 C9orf57Q5W0N0 161 aa20.07■□□□□ 0.8
TPM1-226ENST00000560959 DTHD1Q6ZMT9 781 aa20.07■□□□□ 0.8
TPM1-226ENST00000560959 TMEM150AQ86TG1 271 aa20.07■□□□□ 0.8
TPM1-226ENST00000560959 THEM5Q8N1Q8 247 aa20.07■□□□□ 0.8
TPM1-226ENST00000560959 CCDC26Q8TAB7 109 aa20.07■□□□□ 0.8
TPM1-226ENST00000560959 P2RY13Q9BPV8 354 aa20.07■□□□□ 0.8
TPM1-226ENST00000560959 SMG9Q9H0W8 520 aaKnown RBP20.07■□□□□ 0.8
TPM1-226ENST00000560959 FBRSL1Q9HCM7 1045 aaKnown RBP20.07■□□□□ 0.8
TPM1-226ENST00000560959 ZZEF1O43149 2961 aa20.07■□□□□ 0.8
TPM1-226ENST00000560959 C4orf47A7E2U8 309 aa20.06■□□□□ 0.8
TPM1-226ENST00000560959 PPEF2O14830 753 aa20.06■□□□□ 0.8
TPM1-226ENST00000560959 PIGRP01833 764 aa20.06■□□□□ 0.8
TPM1-226ENST00000560959 HAPLN1P10915 354 aaPredicted RBP20.06■□□□□ 0.8
TPM1-226ENST00000560959 CEACAM1P13688 526 aa20.06■□□□□ 0.8
TPM1-226ENST00000560959 CSRP1P21291 193 aaKnown RBP20.06■□□□□ 0.8
TPM1-226ENST00000560959 U2AF2P26368 475 aaKnown RBP eCLIP20.06■□□□□ 0.84e-8■■■■■ 38.8
TPM1-226ENST00000560959 ATRXP46100 2492 aa20.06■□□□□ 0.8
TPM1-226ENST00000560959 GUCY2FP51841 1108 aa20.06■□□□□ 0.8
TPM1-226ENST00000560959 CREB5Q02930 508 aa20.06■□□□□ 0.8
TPM1-226ENST00000560959 TRIM68Q6AZZ1 485 aa20.06■□□□□ 0.8
TPM1-226ENST00000560959 TCEAL6Q6IPX3 200 aa20.06■□□□□ 0.8
TPM1-226ENST00000560959 CC2D1AQ6P1N0 951 aaPredicted RBP20.06■□□□□ 0.8
TPM1-226ENST00000560959 METTL23Q86XA0 190 aa20.06■□□□□ 0.8
TPM1-226ENST00000560959 MAB21L3Q8N8X9 362 aa20.06■□□□□ 0.8
TPM1-226ENST00000560959 TCEAL3Q969E4 200 aa20.06■□□□□ 0.8
TPM1-226ENST00000560959 ACDQ96AP0 544 aa20.06■□□□□ 0.8
TPM1-226ENST00000560959 BICD1Q96G01 975 aa20.06■□□□□ 0.8
TPM1-226ENST00000560959 CCL26Q9Y258 94 aa20.06■□□□□ 0.8
TPM1-226ENST00000560959 PP2D1A8MPX8 630 aa20.05■□□□□ 0.8
TPM1-226ENST00000560959 HMGA1P17096 107 aaKnown RBP20.05■□□□□ 0.8
TPM1-226ENST00000560959 LIG4P49917 911 aa20.05■□□□□ 0.8
TPM1-226ENST00000560959 TOB1P50616 345 aaPredicted RBP20.05■□□□□ 0.8
TPM1-226ENST00000560959 SLC12A3P55017 1021 aa20.05■□□□□ 0.8
TPM1-226ENST00000560959 NLRP12P59046 1061 aa20.05■□□□□ 0.8
TPM1-226ENST00000560959 NBR1Q14596 966 aa20.05■□□□□ 0.8
TPM1-226ENST00000560959 IL17AQ16552 155 aa20.05■□□□□ 0.8
TPM1-226ENST00000560959 MON1AQ86VX9 555 aa20.05■□□□□ 0.8
TPM1-226ENST00000560959 GIPC2Q8TF65 315 aa20.05■□□□□ 0.8
TPM1-226ENST00000560959 HHIPQ96QV1 700 aa20.05■□□□□ 0.8
TPM1-226ENST00000560959 TMEM121BQ9BXQ6 578 aaPredicted RBP20.05■□□□□ 0.8
TPM1-226ENST00000560959 CCSER1Q9C0I3 900 aa20.05■□□□□ 0.8
TPM1-226ENST00000560959 CPSF3Q9UKF6 684 aaKnown RBP20.05■□□□□ 0.8
TPM1-226ENST00000560959 BAHCC1Q9P281 2608 aa20.05■□□□□ 0.8
TPM1-226ENST00000560959 A0A0B4J269 797 aa20.04■□□□□ 0.8
TPM1-226ENST00000560959 GJA4P35212 333 aa20.04■□□□□ 0.8
TPM1-226ENST00000560959 HMGN5P82970 282 aaKnown RBP20.04■□□□□ 0.8
TPM1-226ENST00000560959 RAD51AP2Q09MP3 1159 aa20.04■□□□□ 0.8
TPM1-226ENST00000560959 DMC1Q14565 340 aa20.04■□□□□ 0.8
TPM1-226ENST00000560959 SH3PXD2AQ5TCZ1 1133 aa20.04■□□□□ 0.8
TPM1-226ENST00000560959 JADE1Q6IE81 842 aa20.04■□□□□ 0.8
TPM1-226ENST00000560959 LRRTM3Q86VH5 581 aa20.04■□□□□ 0.8
TPM1-226ENST00000560959 DCP1BQ8IZD4 617 aaKnown RBP20.04■□□□□ 0.8
TPM1-226ENST00000560959 CPA6Q8N4T0 437 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms