RNA–Protein interactions for RNA: ENST00000560945.1

SNX22-205, Transcript of sorting nexin 22, humanhuman

TSL 1 (best)

Gene SNX22, Length 1,807 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX22-205ENST00000560945 ZNF653Q96CK0 615 aa23.75■■□□□ 1.39
SNX22-205ENST00000560945 NOX5Q96PH1 765 aa23.75■■□□□ 1.39
SNX22-205ENST00000560945 FAM49BQ9NUQ9 324 aa23.75■■□□□ 1.39
SNX22-205ENST00000560945 CYTH4Q9UIA0 394 aa23.75■■□□□ 1.39
SNX22-205ENST00000560945 PCDHGC3Q9UN70 934 aa23.75■■□□□ 1.39
SNX22-205ENST00000560945 GRID2IPA4D2P6 1211 aa23.74■■□□□ 1.39
SNX22-205ENST00000560945 O00370 1275 aa23.74■■□□□ 1.39
SNX22-205ENST00000560945 PALMO75781 387 aa23.74■■□□□ 1.39
SNX22-205ENST00000560945 MICAL2O94851 1124 aa23.74■■□□□ 1.39
SNX22-205ENST00000560945 KIF4AO95239 1232 aa23.74■■□□□ 1.39
SNX22-205ENST00000560945 TIMP1P01033 207 aa23.74■■□□□ 1.39
SNX22-205ENST00000560945 VDRP11473 427 aa23.74■■□□□ 1.39
SNX22-205ENST00000560945 NOP2P46087 812 aaKnown RBP23.74■■□□□ 1.39
SNX22-205ENST00000560945 CDR1P51861 262 aa23.74■■□□□ 1.39
SNX22-205ENST00000560945 DSC1Q08554 894 aa23.74■■□□□ 1.39
SNX22-205ENST00000560945 DSTYKQ6XUX3 929 aa23.74■■□□□ 1.39
SNX22-205ENST00000560945 TRIM72Q6ZMU5 477 aa23.74■■□□□ 1.39
SNX22-205ENST00000560945 MCOLN2Q8IZK6 566 aa23.74■■□□□ 1.39
SNX22-205ENST00000560945 URGCPQ8TCY9 931 aa23.74■■□□□ 1.39
SNX22-205ENST00000560945 C11orf70Q9BRQ4 267 aa23.74■■□□□ 1.39
SNX22-205ENST00000560945 LRFN2Q9ULH4 789 aa23.74■■□□□ 1.39
SNX22-205ENST00000560945 TUBB4AP04350 444 aa23.73■■□□□ 1.39
SNX22-205ENST00000560945 ACAT1P24752 427 aaKnown RBP23.73■■□□□ 1.39
SNX22-205ENST00000560945 GNL1P36915 607 aaPredicted RBP23.73■■□□□ 1.39
SNX22-205ENST00000560945 GPC5P78333 572 aa23.73■■□□□ 1.39
SNX22-205ENST00000560945 MON1BQ7L1V2 547 aa23.73■■□□□ 1.39
SNX22-205ENST00000560945 COLGALT2Q8IYK4 626 aa23.73■■□□□ 1.39
SNX22-205ENST00000560945 RFFLQ8WZ73 363 aa23.73■■□□□ 1.39
SNX22-205ENST00000560945 SNX25Q9H3E2 840 aa23.73■■□□□ 1.39
SNX22-205ENST00000560945 WDR3Q9UNX4 943 aaKnown RBP eCLIP23.73■■□□□ 1.39
SNX22-205ENST00000560945 KIAA0355O15063 1070 aa23.73■■□□□ 1.39
SNX22-205ENST00000560945 ATP1A1P05023 1023 aaKnown RBP23.73■■□□□ 1.39
SNX22-205ENST00000560945 WARSP23381 471 aaKnown RBP23.73■■□□□ 1.39
SNX22-205ENST00000560945 NSFP46459 744 aaKnown RBP23.73■■□□□ 1.39
SNX22-205ENST00000560945 AARSP49588 968 aaKnown RBP eCLIP23.73■■□□□ 1.39
SNX22-205ENST00000560945 PTP4A2Q12974 167 aa23.73■■□□□ 1.39
SNX22-205ENST00000560945 PTPROQ16827 1216 aa23.73■■□□□ 1.39
SNX22-205ENST00000560945 SGO2Q562F6 1265 aa23.73■■□□□ 1.39
SNX22-205ENST00000560945 PPP1R26Q5T8A7 1209 aaPredicted RBP23.73■■□□□ 1.39
SNX22-205ENST00000560945 CNKSR3Q6P9H4 555 aa23.73■■□□□ 1.39
SNX22-205ENST00000560945 MMS22LQ6ZRQ5 1243 aa23.73■■□□□ 1.39
SNX22-205ENST00000560945 TTC39CQ8N584 583 aa23.73■■□□□ 1.39
SNX22-205ENST00000560945 RNF10Q8N5U6 811 aaKnown RBP23.73■■□□□ 1.39
SNX22-205ENST00000560945 UBA3Q8TBC4 463 aa23.73■■□□□ 1.39
SNX22-205ENST00000560945 FAM124BQ9H5Z6 455 aaPredicted RBP23.73■■□□□ 1.39
SNX22-205ENST00000560945 TJP2Q9UDY2 1190 aa23.73■■□□□ 1.39
SNX22-205ENST00000560945 STXBP5LQ9Y2K9 1186 aa23.73■■□□□ 1.39
SNX22-205ENST00000560945 A0A0A6YYK5 440 aaPredicted RBP23.72■■□□□ 1.39
SNX22-205ENST00000560945 NCK2O43639 380 aa23.72■■□□□ 1.39
SNX22-205ENST00000560945 ATP2C2O75185 946 aa23.72■■□□□ 1.39
SNX22-205ENST00000560945 UPP2O95045 317 aa23.72■■□□□ 1.39
SNX22-205ENST00000560945 ACRP10323 421 aa23.72■■□□□ 1.39
SNX22-205ENST00000560945 PSMC1P62191 440 aaKnown RBP23.72■■□□□ 1.39
SNX22-205ENST00000560945 RNASELQ05823 741 aaKnown RBP23.72■■□□□ 1.39
SNX22-205ENST00000560945 KIAA0319Q5VV43 1072 aa23.72■■□□□ 1.39
SNX22-205ENST00000560945 TMCO2Q7Z6W1 182 aaPredicted RBP23.72■■□□□ 1.39
SNX22-205ENST00000560945 UNC93AQ86WB7 457 aa23.72■■□□□ 1.39
SNX22-205ENST00000560945 TPCN2Q8NHX9 752 aa23.72■■□□□ 1.39
SNX22-205ENST00000560945 DDX27Q96GQ7 796 aaKnown RBP23.72■■□□□ 1.39
SNX22-205ENST00000560945 CNOT8Q9UFF9 292 aaKnown RBP23.72■■□□□ 1.39
SNX22-205ENST00000560945 M0QYV0 167 aa23.71■■□□□ 1.39
SNX22-205ENST00000560945 MED7O43513 233 aa23.71■■□□□ 1.39
SNX22-205ENST00000560945 URI1O94763 535 aaPredicted RBP23.71■■□□□ 1.39
SNX22-205ENST00000560945 CYP1A2P05177 515 aa23.71■■□□□ 1.39
SNX22-205ENST00000560945 RAG1P15918 1043 aa23.71■■□□□ 1.39
SNX22-205ENST00000560945 RRM1P23921 792 aa23.71■■□□□ 1.39
SNX22-205ENST00000560945 SMYD5Q6GMV2 418 aa23.71■■□□□ 1.39
SNX22-205ENST00000560945 ABI1Q8IZP0 508 aa23.71■■□□□ 1.39
SNX22-205ENST00000560945 TRIM58Q8NG06 486 aa23.71■■□□□ 1.39
SNX22-205ENST00000560945 UROC1Q96N76 676 aa23.71■■□□□ 1.39
SNX22-205ENST00000560945 NAPGQ99747 312 aaPredicted RBP23.71■■□□□ 1.39
SNX22-205ENST00000560945 NRDE2Q9H7Z3 1164 aa23.71■■□□□ 1.39
SNX22-205ENST00000560945 CTTNBP2NLQ9P2B4 639 aa23.71■■□□□ 1.39
SNX22-205ENST00000560945 TSPAN16Q9UKR8 245 aa23.71■■□□□ 1.39
SNX22-205ENST00000560945 PRG3Q9Y2Y8 225 aaPredicted RBP23.71■■□□□ 1.39
SNX22-205ENST00000560945 PCDHGC5Q9Y5F6 944 aa23.71■■□□□ 1.39
SNX22-205ENST00000560945 ALPK3Q96L96 1907 aa23.71■■□□□ 1.39
SNX22-205ENST00000560945 FTCDO95954 541 aa23.7■■□□□ 1.39
SNX22-205ENST00000560945 CCDC130P13994 396 aa23.7■■□□□ 1.39
SNX22-205ENST00000560945 CDH5P33151 784 aaPredicted RBP23.7■■□□□ 1.39
SNX22-205ENST00000560945 OR1G1P47890 313 aa23.7■■□□□ 1.39
SNX22-205ENST00000560945 IKBKEQ14164 716 aa23.7■■□□□ 1.39
SNX22-205ENST00000560945 CNGA2Q16280 664 aa23.7■■□□□ 1.39
SNX22-205ENST00000560945 GOLGA7BQ2TAP0 167 aa23.7■■□□□ 1.39
SNX22-205ENST00000560945 PHF13Q86YI8 300 aaPredicted RBP23.7■■□□□ 1.39
SNX22-205ENST00000560945 ABHD8Q96I13 439 aa23.7■■□□□ 1.39
SNX22-205ENST00000560945 GTF3C4Q9UKN8 822 aa23.7■■□□□ 1.39
SNX22-205ENST00000560945 CTAGE9A4FU28 777 aa23.7■■□□□ 1.38
SNX22-205ENST00000560945 TBKBP1A7MCY6 615 aa23.7■■□□□ 1.38
SNX22-205ENST00000560945 GABRDO14764 452 aa23.7■■□□□ 1.38
SNX22-205ENST00000560945 GJB6O95452 261 aa23.7■■□□□ 1.38
SNX22-205ENST00000560945 PFKMP08237 780 aa23.7■■□□□ 1.38
SNX22-205ENST00000560945 DCLRE1AQ6PJP8 1040 aa23.7■■□□□ 1.38
SNX22-205ENST00000560945 NPAS4Q8IUM7 802 aa23.7■■□□□ 1.38
SNX22-205ENST00000560945 TMEM35BQ8NCS4 154 aa23.7■■□□□ 1.38
SNX22-205ENST00000560945 BTBD6Q96KE9 485 aa23.7■■□□□ 1.38
SNX22-205ENST00000560945 ADAM22Q9P0K1 906 aa23.7■■□□□ 1.38
SNX22-205ENST00000560945 KANSL3Q9P2N6 904 aa23.7■■□□□ 1.38
SNX22-205ENST00000560945 PACSIN2Q9UNF0 486 aaPredicted RBP23.7■■□□□ 1.38
SNX22-205ENST00000560945 LSM8O95777 96 aaKnown RBP23.69■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms