RNA–Protein interactions for RNA: ENST00000560897.1

HERC1-210, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-210ENST00000560897 USP37Q86T82 979 aa10.43□□□□□ -0.74
HERC1-210ENST00000560897 SMC5Q8IY18 1101 aa10.43□□□□□ -0.74
HERC1-210ENST00000560897 CCDC33Q8N5R6 958 aa10.43□□□□□ -0.74
HERC1-210ENST00000560897 PDCD7Q8N8D1 485 aaKnown RBP10.43□□□□□ -0.74
HERC1-210ENST00000560897 TTC16Q8NEE8 873 aa10.43□□□□□ -0.74
HERC1-210ENST00000560897 OLIG1Q8TAK6 271 aa10.43□□□□□ -0.74
HERC1-210ENST00000560897 USP33Q8TEY7 942 aa10.43□□□□□ -0.74
HERC1-210ENST00000560897 SETD7Q8WTS6 366 aaKnown RBP10.43□□□□□ -0.74
HERC1-210ENST00000560897 SUSD3Q96L08 255 aa10.43□□□□□ -0.74
HERC1-210ENST00000560897 PNMA5Q96PV4 448 aa10.43□□□□□ -0.74
HERC1-210ENST00000560897 CCDC94Q9BW85 323 aaPredicted RBP10.43□□□□□ -0.74
HERC1-210ENST00000560897 FZD8Q9H461 694 aa10.43□□□□□ -0.74
HERC1-210ENST00000560897 PRORYQ9H606 182 aa10.43□□□□□ -0.74
HERC1-210ENST00000560897 ECT2Q9H8V3 914 aa10.43□□□□□ -0.74
HERC1-210ENST00000560897 VPS54Q9P1Q0 977 aa10.43□□□□□ -0.74
HERC1-210ENST00000560897 KIAA1522Q9P206 1035 aaPredicted RBP10.43□□□□□ -0.74
HERC1-210ENST00000560897 BRPF3Q9ULD4 1205 aa10.43□□□□□ -0.74
HERC1-210ENST00000560897 TBX20Q9UMR3 447 aa10.43□□□□□ -0.74
HERC1-210ENST00000560897 PCDHB8Q9UN66 801 aa10.43□□□□□ -0.74
HERC1-210ENST00000560897 COL6A6A6NMZ7 2263 aa10.43□□□□□ -0.74
HERC1-210ENST00000560897 PCDH15Q96QU1 1955 aa10.43□□□□□ -0.74
HERC1-210ENST00000560897 PTPRDP23468 1912 aa10.43□□□□□ -0.74
HERC1-210ENST00000560897 ACKR2O00590 384 aa10.42□□□□□ -0.74
HERC1-210ENST00000560897 ZBTB39O15060 712 aa10.42□□□□□ -0.74
HERC1-210ENST00000560897 USO1O60763 962 aaKnown RBP10.42□□□□□ -0.74
HERC1-210ENST00000560897 OR4Q2P0C623 313 aa10.42□□□□□ -0.74
HERC1-210ENST00000560897 DDX6P26196 483 aaKnown RBP eCLIP10.42□□□□□ -0.74
HERC1-210ENST00000560897 ADD1P35611 737 aaKnown RBP10.42□□□□□ -0.74
HERC1-210ENST00000560897 FXR2P51116 673 aaKnown RBP eCLIP10.42□□□□□ -0.741e-6■■■□□ 15.7
HERC1-210ENST00000560897 SOX4Q06945 474 aaPredicted RBP10.42□□□□□ -0.74
HERC1-210ENST00000560897 PLEKHG6Q3KR16 790 aa10.42□□□□□ -0.74
HERC1-210ENST00000560897 TTC22Q5TAA0 569 aa10.42□□□□□ -0.74
HERC1-210ENST00000560897 CDCA2Q69YH5 1023 aaPredicted RBP10.42□□□□□ -0.74
HERC1-210ENST00000560897 NAIF1Q69YI7 327 aaPredicted RBP10.42□□□□□ -0.74
HERC1-210ENST00000560897 SLC36A4Q6YBV0 504 aa10.42□□□□□ -0.74
HERC1-210ENST00000560897 MAEAQ7L5Y9 396 aa10.42□□□□□ -0.74
HERC1-210ENST00000560897 GPR155Q7Z3F1 870 aa10.42□□□□□ -0.74
HERC1-210ENST00000560897 GLRX5Q86SX6 157 aa10.42□□□□□ -0.74
HERC1-210ENST00000560897 SLCO6A1Q86UG4 719 aa10.42□□□□□ -0.74
HERC1-210ENST00000560897 BEST2Q8NFU1 509 aa10.42□□□□□ -0.74
HERC1-210ENST00000560897 DEPTORQ8TB45 409 aa10.42□□□□□ -0.74
HERC1-210ENST00000560897 HMGB4Q8WW32 186 aa10.42□□□□□ -0.74
HERC1-210ENST00000560897 ATP2A3Q93084 1043 aa10.42□□□□□ -0.74
HERC1-210ENST00000560897 SEPT5Q99719 369 aaPredicted RBP10.42□□□□□ -0.74
HERC1-210ENST00000560897 ANKEF1Q9NU02 776 aa10.42□□□□□ -0.74
HERC1-210ENST00000560897 DUS2Q9NX74 493 aaKnown RBP10.42□□□□□ -0.74
HERC1-210ENST00000560897 SUSD2Q9UGT4 822 aa10.42□□□□□ -0.74
HERC1-210ENST00000560897 SLC27A5Q9Y2P5 690 aa10.42□□□□□ -0.74
HERC1-210ENST00000560897 PLXND1Q9Y4D7 1925 aa10.42□□□□□ -0.74
HERC1-210ENST00000560897 OR6C75A6NL08 312 aa10.41□□□□□ -0.74
HERC1-210ENST00000560897 E9PAM4 449 aa10.41□□□□□ -0.74
HERC1-210ENST00000560897 SLC37A4O43826 429 aa10.41□□□□□ -0.74
HERC1-210ENST00000560897 NEFLP07196 543 aa10.41□□□□□ -0.74
HERC1-210ENST00000560897 HLA-EP13747 358 aa10.41□□□□□ -0.74
HERC1-210ENST00000560897 GNSP15586 552 aa10.41□□□□□ -0.74
HERC1-210ENST00000560897 ITPKBP27987 946 aa10.41□□□□□ -0.74
HERC1-210ENST00000560897 ZNF33AQ06730 810 aa10.41□□□□□ -0.74
HERC1-210ENST00000560897 GPR17Q13304 367 aa10.41□□□□□ -0.74
HERC1-210ENST00000560897 MTF1Q14872 753 aa10.41□□□□□ -0.74
HERC1-210ENST00000560897 RNF20Q5VTR2 975 aa10.41□□□□□ -0.74
HERC1-210ENST00000560897 EEF1DP3Q658K8 133 aa10.41□□□□□ -0.74
HERC1-210ENST00000560897 CREB3L3Q68CJ9 461 aa10.41□□□□□ -0.74
HERC1-210ENST00000560897 ARMCX5Q6P1M9 558 aa10.41□□□□□ -0.74
HERC1-210ENST00000560897 RGL4Q8IZJ4 473 aa10.41□□□□□ -0.74
HERC1-210ENST00000560897 MAB21L3Q8N8X9 362 aa10.41□□□□□ -0.74
HERC1-210ENST00000560897 MCPH1Q8NEM0 835 aa10.41□□□□□ -0.74
HERC1-210ENST00000560897 BAP1Q92560 729 aa10.41□□□□□ -0.74
HERC1-210ENST00000560897 USP13Q92995 863 aaPredicted RBP10.41□□□□□ -0.74
HERC1-210ENST00000560897 TCEANC2Q96MN5 208 aa10.41□□□□□ -0.74
HERC1-210ENST00000560897 PI4K2AQ9BTU6 479 aa10.41□□□□□ -0.74
HERC1-210ENST00000560897 SLC46A2Q9BY10 475 aa10.41□□□□□ -0.74
HERC1-210ENST00000560897 TDP1Q9NUW8 608 aa10.41□□□□□ -0.74
HERC1-210ENST00000560897 PCDHA4Q9UN74 947 aa10.41□□□□□ -0.74
HERC1-210ENST00000560897 CCL26Q9Y258 94 aa10.41□□□□□ -0.74
HERC1-210ENST00000560897 PTPRQQ9UMZ3 2332 aa10.41□□□□□ -0.74
HERC1-210ENST00000560897 CITO14578 2027 aa10.4□□□□□ -0.74
HERC1-210ENST00000560897 A0A1W2PQD8 194 aa10.4□□□□□ -0.74
HERC1-210ENST00000560897 MTMR11A4FU01 709 aa10.4□□□□□ -0.74
HERC1-210ENST00000560897 GOLGA8CPA6NN73 597 aa10.4□□□□□ -0.74
HERC1-210ENST00000560897 TTLL13PA6NNM8 815 aa10.4□□□□□ -0.74
HERC1-210ENST00000560897 ZBTB24O43167 697 aaPredicted RBP10.4□□□□□ -0.74
HERC1-210ENST00000560897 BAG4O95429 457 aaKnown RBP10.4□□□□□ -0.74
HERC1-210ENST00000560897 GSPT1P15170 499 aaKnown RBP10.4□□□□□ -0.74
HERC1-210ENST00000560897 TUFMP49411 452 aaKnown RBP10.4□□□□□ -0.74
HERC1-210ENST00000560897 OSTNP61366 133 aa10.4□□□□□ -0.74
HERC1-210ENST00000560897 MRPS21P82921 87 aaKnown RBP10.4□□□□□ -0.74
HERC1-210ENST00000560897 MAP7D1Q3KQU3 841 aa10.4□□□□□ -0.74
HERC1-210ENST00000560897 MGAT5BQ3V5L5 792 aa10.4□□□□□ -0.74
HERC1-210ENST00000560897 EOGTQ5NDL2 527 aa10.4□□□□□ -0.74
HERC1-210ENST00000560897 ATF7IP2Q5U623 682 aa10.4□□□□□ -0.74
HERC1-210ENST00000560897 CENPPQ6IPU0 288 aa10.4□□□□□ -0.74
HERC1-210ENST00000560897 DEFB119Q8N690 84 aa10.4□□□□□ -0.74
HERC1-210ENST00000560897 FRMD1Q8N878 549 aa10.4□□□□□ -0.74
HERC1-210ENST00000560897 FAM181AQ8N9Y4 354 aa10.4□□□□□ -0.74
HERC1-210ENST00000560897 OSCP1Q8WVF1 389 aa10.4□□□□□ -0.74
HERC1-210ENST00000560897 MRPS31Q92665 395 aaKnown RBP10.4□□□□□ -0.74
HERC1-210ENST00000560897 EZH1Q92800 747 aaPredicted RBP10.4□□□□□ -0.74
HERC1-210ENST00000560897 NXPE2Q96DL1 559 aa10.4□□□□□ -0.74
HERC1-210ENST00000560897 NACC1Q96RE7 527 aa10.4□□□□□ -0.74
HERC1-210ENST00000560897 CDC6Q99741 560 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms