RNA–Protein interactions for RNA: ENST00000560463.5

TRAF3-209, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-209ENST00000560463 NCANO14594 1321 aa9.15□□□□□ -0.94
TRAF3-209ENST00000560463 CASTOR2A6NHX0 329 aa9.15□□□□□ -0.94
TRAF3-209ENST00000560463 A8MXQ7 604 aa9.15□□□□□ -0.94
TRAF3-209ENST00000560463 TMCO5BA8MYB1 307 aa9.15□□□□□ -0.94
TRAF3-209ENST00000560463 GABRDO14764 452 aa9.15□□□□□ -0.94
TRAF3-209ENST00000560463 KIF4AO95239 1232 aa9.15□□□□□ -0.94
TRAF3-209ENST00000560463 CYP11A1P05108 521 aa9.15□□□□□ -0.94
TRAF3-209ENST00000560463 FGFR1P11362 822 aa9.15□□□□□ -0.94
TRAF3-209ENST00000560463 CD19P15391 556 aa9.15□□□□□ -0.94
TRAF3-209ENST00000560463 EN2P19622 333 aaPredicted RBP9.15□□□□□ -0.94
TRAF3-209ENST00000560463 NSFP46459 744 aaKnown RBP9.15□□□□□ -0.94
TRAF3-209ENST00000560463 HADHBP55084 474 aaKnown RBP9.15□□□□□ -0.94
TRAF3-209ENST00000560463 GNG11P61952 73 aa9.15□□□□□ -0.94
TRAF3-209ENST00000560463 NOMO3P69849 1222 aa9.15□□□□□ -0.94
TRAF3-209ENST00000560463 C1QBPQ07021 282 aaKnown RBP9.15□□□□□ -0.94
TRAF3-209ENST00000560463 TCTN1Q2MV58 587 aa9.15□□□□□ -0.94
TRAF3-209ENST00000560463 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.15□□□□□ -0.94
TRAF3-209ENST00000560463 METTL23Q86XA0 190 aa9.15□□□□□ -0.94
TRAF3-209ENST00000560463 PALB2Q86YC2 1186 aa9.15□□□□□ -0.94
TRAF3-209ENST00000560463 PHF13Q86YI8 300 aaPredicted RBP9.15□□□□□ -0.94
TRAF3-209ENST00000560463 ADGRF2Q8IZF7 708 aa9.15□□□□□ -0.94
TRAF3-209ENST00000560463 MSANTD4Q8NCY6 345 aa9.15□□□□□ -0.94
TRAF3-209ENST00000560463 C3orf58Q8NDZ4 430 aa9.15□□□□□ -0.94
TRAF3-209ENST00000560463 OR6B3Q8NGW1 331 aa9.15□□□□□ -0.94
TRAF3-209ENST00000560463 KBTBD7Q8WVZ9 684 aa9.15□□□□□ -0.94
TRAF3-209ENST00000560463 RFFLQ8WZ73 363 aa9.15□□□□□ -0.94
TRAF3-209ENST00000560463 TOP1MTQ969P6 601 aa9.15□□□□□ -0.94
TRAF3-209ENST00000560463 CYFIP2Q96F07 1278 aa9.15□□□□□ -0.94
TRAF3-209ENST00000560463 SUSD3Q96L08 255 aa9.15□□□□□ -0.94
TRAF3-209ENST00000560463 NOX5Q96PH1 765 aa9.15□□□□□ -0.94
TRAF3-209ENST00000560463 ALS2CR12Q96Q35 445 aa9.15□□□□□ -0.94
TRAF3-209ENST00000560463 MRPL45Q9BRJ2 306 aaKnown RBP9.15□□□□□ -0.94
TRAF3-209ENST00000560463 TMEM175Q9BSA9 504 aa9.15□□□□□ -0.94
TRAF3-209ENST00000560463 PACSIN1Q9BY11 444 aa9.15□□□□□ -0.94
TRAF3-209ENST00000560463 IL23AQ9NPF7 189 aa9.15□□□□□ -0.94
TRAF3-209ENST00000560463 GTF3C4Q9UKN8 822 aa9.15□□□□□ -0.94
TRAF3-209ENST00000560463 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.15□□□□□ -0.94
TRAF3-209ENST00000560463 PAXBP1Q9Y5B6 917 aa9.15□□□□□ -0.94
TRAF3-209ENST00000560463 OBSL1O75147 1896 aa9.15□□□□□ -0.95
TRAF3-209ENST00000560463 ANAPC1Q9H1A4 1944 aa9.14□□□□□ -0.95
TRAF3-209ENST00000560463 A0A0U1RQJ8 604 aa9.14□□□□□ -0.95
TRAF3-209ENST00000560463 O00370 1275 aa9.14□□□□□ -0.95
TRAF3-209ENST00000560463 B3GAT3O94766 335 aa9.14□□□□□ -0.95
TRAF3-209ENST00000560463 DDHD2O94830 711 aa9.14□□□□□ -0.95
TRAF3-209ENST00000560463 ABL1P00519 1130 aa9.14□□□□□ -0.95
TRAF3-209ENST00000560463 AMHP03971 560 aa9.14□□□□□ -0.95
TRAF3-209ENST00000560463 ALDH2P05091 517 aa9.14□□□□□ -0.95
TRAF3-209ENST00000560463 CALB1P05937 261 aa9.14□□□□□ -0.95
TRAF3-209ENST00000560463 CSF2RAP15509 400 aa9.14□□□□□ -0.95
TRAF3-209ENST00000560463 TYMPP19971 482 aa9.14□□□□□ -0.95
TRAF3-209ENST00000560463 BRD2P25440 801 aaKnown RBP9.14□□□□□ -0.95
TRAF3-209ENST00000560463 CASQ1P31415 396 aa9.14□□□□□ -0.95
TRAF3-209ENST00000560463 OR1G1P47890 313 aa9.14□□□□□ -0.95
TRAF3-209ENST00000560463 SNX16P57768 344 aa9.14□□□□□ -0.95
TRAF3-209ENST00000560463 PPIGQ13427 754 aaKnown RBP eCLIP9.14□□□□□ -0.95
TRAF3-209ENST00000560463 TIGD5Q53EQ6 642 aa9.14□□□□□ -0.95
TRAF3-209ENST00000560463 ZNF569Q5MCW4 686 aa9.14□□□□□ -0.95
TRAF3-209ENST00000560463 ARHGAP17Q68EM7 881 aa9.14□□□□□ -0.95
TRAF3-209ENST00000560463 LCLAT1Q6UWP7 414 aa9.14□□□□□ -0.95
TRAF3-209ENST00000560463 ZNF280BQ86YH2 543 aa9.14□□□□□ -0.95
TRAF3-209ENST00000560463 MCOLN2Q8IZK6 566 aa9.14□□□□□ -0.95
TRAF3-209ENST00000560463 LRRC43Q8N309 656 aa9.14□□□□□ -0.95
TRAF3-209ENST00000560463 PDCL2Q8N4E4 241 aa9.14□□□□□ -0.95
TRAF3-209ENST00000560463 ATRIPQ8WXE1 791 aa9.14□□□□□ -0.95
TRAF3-209ENST00000560463 TFAP2BQ92481 460 aa9.14□□□□□ -0.95
TRAF3-209ENST00000560463 VWCEQ96DN2 955 aa9.14□□□□□ -0.95
TRAF3-209ENST00000560463 TWNKQ96RR1 684 aa9.14□□□□□ -0.95
TRAF3-209ENST00000560463 PAAF1Q9BRP4 392 aa9.14□□□□□ -0.95
TRAF3-209ENST00000560463 HTATIP2Q9BUP3 242 aa9.14□□□□□ -0.95
TRAF3-209ENST00000560463 COLEC11Q9BWP8 271 aa9.14□□□□□ -0.95
TRAF3-209ENST00000560463 MIS12Q9H081 205 aa9.14□□□□□ -0.95
TRAF3-209ENST00000560463 AVENQ9NQS1 362 aaPredicted RBP9.14□□□□□ -0.95
TRAF3-209ENST00000560463 TAS2R14Q9NYV8 317 aa9.14□□□□□ -0.95
TRAF3-209ENST00000560463 UVRAGQ9P2Y5 699 aa9.14□□□□□ -0.95
TRAF3-209ENST00000560463 HMGXB4Q9UGU5 601 aa9.14□□□□□ -0.95
TRAF3-209ENST00000560463 STRIP2Q9ULQ0 834 aa9.14□□□□□ -0.95
TRAF3-209ENST00000560463 TFR2Q9UP52 801 aa9.14□□□□□ -0.95
TRAF3-209ENST00000560463 PCDHGC5Q9Y5F6 944 aa9.14□□□□□ -0.95
TRAF3-209ENST00000560463 DUSP10Q9Y6W6 482 aa9.14□□□□□ -0.95
TRAF3-209ENST00000560463 MACROD2A1Z1Q3 448 aa9.13□□□□□ -0.95
TRAF3-209ENST00000560463 CTAGE9A4FU28 777 aa9.13□□□□□ -0.95
TRAF3-209ENST00000560463 TBKBP1A7MCY6 615 aa9.13□□□□□ -0.95
TRAF3-209ENST00000560463 NRP1O14786 923 aa9.13□□□□□ -0.95
TRAF3-209ENST00000560463 DGKIO75912 1065 aa9.13□□□□□ -0.95
TRAF3-209ENST00000560463 MTA2O94776 668 aa9.13□□□□□ -0.95
TRAF3-209ENST00000560463 CALCAP01258 141 aa9.13□□□□□ -0.95
TRAF3-209ENST00000560463 CYP1A2P05177 515 aa9.13□□□□□ -0.95
TRAF3-209ENST00000560463 SETSIPP0DME0 302 aa9.13□□□□□ -0.95
TRAF3-209ENST00000560463 PTPN1P18031 435 aaKnown RBP9.13□□□□□ -0.95
TRAF3-209ENST00000560463 ABCB4P21439 1286 aa9.13□□□□□ -0.95
TRAF3-209ENST00000560463 MMP8P22894 467 aa9.13□□□□□ -0.95
TRAF3-209ENST00000560463 ITGB8P26012 769 aa9.13□□□□□ -0.95
TRAF3-209ENST00000560463 PCSK1P29120 753 aa9.13□□□□□ -0.95
TRAF3-209ENST00000560463 NOP2P46087 812 aaKnown RBP9.13□□□□□ -0.95
TRAF3-209ENST00000560463 NAP1L1P55209 391 aaKnown RBP9.13□□□□□ -0.95
TRAF3-209ENST00000560463 ELAVL2Q12926 359 aaKnown RBP9.13□□□□□ -0.95
TRAF3-209ENST00000560463 TUBB2AQ13885 445 aa9.13□□□□□ -0.95
TRAF3-209ENST00000560463 MAPRE1Q15691 268 aaKnown RBP9.13□□□□□ -0.95
TRAF3-209ENST00000560463 LIN9Q5TKA1 542 aa9.13□□□□□ -0.95
TRAF3-209ENST00000560463 NAA35Q5VZE5 725 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms