RNA–Protein interactions for RNA: ENST00000560371.5

TRAF3-208, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 7,640 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-208ENST00000560371 SPDYE5A6NIY4 337 aa14.06□□□□□ -0.16
TRAF3-208ENST00000560371 RBP3P10745 1247 aa14.06□□□□□ -0.16
TRAF3-208ENST00000560371 RPL10AP62906 217 aaKnown RBP14.06□□□□□ -0.16
TRAF3-208ENST00000560371 SPDYE7PQ495Y7 208 aa14.06□□□□□ -0.16
TRAF3-208ENST00000560371 ELMO2Q96JJ3 720 aa14.06□□□□□ -0.16
TRAF3-208ENST00000560371 PHF2O75151 1096 aa14.06□□□□□ -0.16
TRAF3-208ENST00000560371 SUPT3HO75486 399 aa14.06□□□□□ -0.16
TRAF3-208ENST00000560371 GUCY2CP25092 1073 aa14.06□□□□□ -0.16
TRAF3-208ENST00000560371 GCKP35557 465 aa14.06□□□□□ -0.16
TRAF3-208ENST00000560371 TEDDM1Q5T9Z0 273 aa14.06□□□□□ -0.16
TRAF3-208ENST00000560371 MPZL3Q6UWV2 235 aa14.06□□□□□ -0.16
TRAF3-208ENST00000560371 SCOCQ9UIL1 159 aa14.06□□□□□ -0.16
TRAF3-208ENST00000560371 NEU2Q9Y3R4 380 aa14.06□□□□□ -0.16
TRAF3-208ENST00000560371 ITIH6Q6UXX5 1313 aa14.05□□□□□ -0.16
TRAF3-208ENST00000560371 DDTLA6NHG4 134 aaPredicted RBP14.05□□□□□ -0.16
TRAF3-208ENST00000560371 NFIBO00712 420 aa14.05□□□□□ -0.16
TRAF3-208ENST00000560371 KDM1AO60341 852 aa14.05□□□□□ -0.16
TRAF3-208ENST00000560371 ARP10275 920 aa14.05□□□□□ -0.16
TRAF3-208ENST00000560371 MAPRE2Q15555 327 aa14.05□□□□□ -0.16
TRAF3-208ENST00000560371 CCDC144BQ3MJ40 725 aa14.05□□□□□ -0.16
TRAF3-208ENST00000560371 CPB2Q96IY4 423 aa14.05□□□□□ -0.16
TRAF3-208ENST00000560371 RNASEH1O60930 286 aaKnown RBP14.05□□□□□ -0.16
TRAF3-208ENST00000560371 EGFRP00533 1210 aa14.05□□□□□ -0.16
TRAF3-208ENST00000560371 NR1I3Q14994 352 aa14.05□□□□□ -0.16
TRAF3-208ENST00000560371 ACOT1Q86TX2 421 aa14.05□□□□□ -0.16
TRAF3-208ENST00000560371 GPC2Q8N158 579 aa14.05□□□□□ -0.16
TRAF3-208ENST00000560371 ZDHHC9Q9Y397 364 aa14.05□□□□□ -0.16
TRAF3-208ENST00000560371 TCHHQ07283 1943 aa14.05□□□□□ -0.16
TRAF3-208ENST00000560371 GMNCA6NCL1 334 aa14.05□□□□□ -0.16
TRAF3-208ENST00000560371 CCDC22O60826 627 aa14.05□□□□□ -0.16
TRAF3-208ENST00000560371 CEP19Q96LK0 163 aa14.05□□□□□ -0.16
TRAF3-208ENST00000560371 MTG1Q9BT17 334 aaPredicted RBP14.05□□□□□ -0.16
TRAF3-208ENST00000560371 NDE1Q9NXR1 346 aa14.05□□□□□ -0.16
TRAF3-208ENST00000560371 F5H5T6 163 aa14.05□□□□□ -0.16
TRAF3-208ENST00000560371 MOXD1Q6UVY6 613 aa14.05□□□□□ -0.16
TRAF3-208ENST00000560371 METTL7BQ6UX53 244 aa14.05□□□□□ -0.16
TRAF3-208ENST00000560371 C3orf62Q6ZUJ4 267 aa14.05□□□□□ -0.16
TRAF3-208ENST00000560371 TFB1MQ8WVM0 346 aaKnown RBP14.05□□□□□ -0.16
TRAF3-208ENST00000560371 OTULINQ96BN8 352 aa14.05□□□□□ -0.16
TRAF3-208ENST00000560371 GOLPH3Q9H4A6 298 aa14.05□□□□□ -0.16
TRAF3-208ENST00000560371 CYP4F11Q9HBI6 524 aa14.05□□□□□ -0.16
TRAF3-208ENST00000560371 RRP15Q9Y3B9 282 aaKnown RBP14.05□□□□□ -0.16
TRAF3-208ENST00000560371 MEGF6O75095 1541 aa14.05□□□□□ -0.16
TRAF3-208ENST00000560371 ABCE1P61221 599 aaKnown RBP14.05□□□□□ -0.16
TRAF3-208ENST00000560371 CTXN3Q4LDR2 81 aa14.05□□□□□ -0.16
TRAF3-208ENST00000560371 EPC2Q52LR7 807 aa14.05□□□□□ -0.16
TRAF3-208ENST00000560371 PATL1Q86TB9 770 aaKnown RBP14.05□□□□□ -0.16
TRAF3-208ENST00000560371 OSMRQ99650 979 aa14.05□□□□□ -0.16
TRAF3-208ENST00000560371 ABHD16BQ9H3Z7 469 aa14.05□□□□□ -0.16
TRAF3-208ENST00000560371 PMPCBO75439 489 aa14.05□□□□□ -0.16
TRAF3-208ENST00000560371 LRRC74AQ0VAA2 488 aa14.05□□□□□ -0.16
TRAF3-208ENST00000560371 C6orf10Q5SRN2 563 aa14.05□□□□□ -0.16
TRAF3-208ENST00000560371 DAGLBQ8NCG7 672 aa14.05□□□□□ -0.16
TRAF3-208ENST00000560371 CD274Q9NZQ7 290 aa14.05□□□□□ -0.16
TRAF3-208ENST00000560371 KIAA1257Q9ULG3 409 aa14.05□□□□□ -0.16
TRAF3-208ENST00000560371 CITO14578 2027 aa14.04□□□□□ -0.16
TRAF3-208ENST00000560371 ALDH1A2O94788 518 aa14.04□□□□□ -0.16
TRAF3-208ENST00000560371 DNAJB2P25686 324 aa14.04□□□□□ -0.16
TRAF3-208ENST00000560371 EEF1DP29692 281 aaKnown RBP14.04□□□□□ -0.16
TRAF3-208ENST00000560371 EPHB3P54753 998 aa14.04□□□□□ -0.16
TRAF3-208ENST00000560371 ZNF200P98182 395 aaPredicted RBP14.04□□□□□ -0.16
TRAF3-208ENST00000560371 TAGAPQ8N103 731 aa14.04□□□□□ -0.16
TRAF3-208ENST00000560371 SOCS4Q8WXH5 440 aa14.04□□□□□ -0.16
TRAF3-208ENST00000560371 AKT1S1Q96B36 256 aa14.04□□□□□ -0.16
TRAF3-208ENST00000560371 GLIS2Q9BZE0 524 aaPredicted RBP14.04□□□□□ -0.16
TRAF3-208ENST00000560371 VPS33BQ9H267 617 aa14.04□□□□□ -0.16
TRAF3-208ENST00000560371 LRRC14Q15048 493 aa14.04□□□□□ -0.16
TRAF3-208ENST00000560371 ADGRF2Q8IZF7 708 aa14.04□□□□□ -0.16
TRAF3-208ENST00000560371 HASPINQ8TF76 798 aa14.04□□□□□ -0.16
TRAF3-208ENST00000560371 KRT4P19013 534 aa14.04□□□□□ -0.16
TRAF3-208ENST00000560371 PRKCQQ04759 706 aa14.04□□□□□ -0.16
TRAF3-208ENST00000560371 TRIML2Q8N7C3 387 aa14.04□□□□□ -0.16
TRAF3-208ENST00000560371 NAF1Q96HR8 494 aaKnown RBP14.04□□□□□ -0.16
TRAF3-208ENST00000560371 RUSC1Q9BVN2 902 aa14.04□□□□□ -0.16
TRAF3-208ENST00000560371 PKD2L2Q9NZM6 624 aa14.04□□□□□ -0.16
TRAF3-208ENST00000560371 FAM47DPA6NHR8 397 aa14.04□□□□□ -0.16
TRAF3-208ENST00000560371 SETSIPP0DME0 302 aa14.04□□□□□ -0.16
TRAF3-208ENST00000560371 MBL2P11226 248 aaPredicted RBP14.04□□□□□ -0.16
TRAF3-208ENST00000560371 IL1R1P14778 569 aa14.04□□□□□ -0.16
TRAF3-208ENST00000560371 ITIH2P19823 946 aa14.04□□□□□ -0.16
TRAF3-208ENST00000560371 BOLA3Q53S33 107 aa14.04□□□□□ -0.16
TRAF3-208ENST00000560371 LINC00523Q86TU6 105 aa14.04□□□□□ -0.16
TRAF3-208ENST00000560371 PSD3Q9NYI0 1048 aa14.04□□□□□ -0.16
TRAF3-208ENST00000560371 KANSL3Q9P2N6 904 aa14.04□□□□□ -0.16
TRAF3-208ENST00000560371 CDV3Q9UKY7 258 aaKnown RBP14.04□□□□□ -0.16
TRAF3-208ENST00000560371 NCOA3Q9Y6Q9 1424 aa14.04□□□□□ -0.16
TRAF3-208ENST00000560371 ZNF185O15231 689 aa14.04□□□□□ -0.16
TRAF3-208ENST00000560371 CHRM3P20309 590 aa14.04□□□□□ -0.16
TRAF3-208ENST00000560371 COMTP21964 271 aa14.04□□□□□ -0.16
TRAF3-208ENST00000560371 NPTX2P47972 431 aa14.04□□□□□ -0.16
TRAF3-208ENST00000560371 HMX1Q9NP08 348 aaPredicted RBP14.04□□□□□ -0.16
TRAF3-208ENST00000560371 TMEM39AQ9NV64 488 aa14.04□□□□□ -0.16
TRAF3-208ENST00000560371 NSMCE4AQ9NXX6 385 aa14.04□□□□□ -0.16
TRAF3-208ENST00000560371 ANGPT2O15123 496 aa14.04□□□□□ -0.16
TRAF3-208ENST00000560371 ATMINO43313 823 aaPredicted RBP14.04□□□□□ -0.16
TRAF3-208ENST00000560371 HAUS5O94927 633 aa14.04□□□□□ -0.16
TRAF3-208ENST00000560371 RAP1GDS1P52306 607 aa14.04□□□□□ -0.16
TRAF3-208ENST00000560371 AMPD2Q01433 879 aa14.04□□□□□ -0.16
TRAF3-208ENST00000560371 RABGAP1LQ5R372 815 aa14.04□□□□□ -0.16
TRAF3-208ENST00000560371 TASP1Q9H6P5 420 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 197.4 ms