RNA–Protein interactions for RNA: ENST00000559819.5

LRRC28-216, Transcript of leucine rich repeat containing 28, humanhuman

TSL 2

Gene LRRC28, Length 2,712 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-216ENST00000559819 CKAP2Q8WWK9 683 aa10.61□□□□□ -0.71
LRRC28-216ENST00000559819 SEPT1Q8WYJ6 367 aa10.61□□□□□ -0.71
LRRC28-216ENST00000559819 TMEM121Q9BTD3 319 aa10.61□□□□□ -0.71
LRRC28-216ENST00000559819 CPSF3Q9UKF6 684 aaKnown RBP10.61□□□□□ -0.71
LRRC28-216ENST00000559819 AGAP1Q9UPQ3 857 aa10.61□□□□□ -0.71
LRRC28-216ENST00000559819 ZBTB42B2RXF5 422 aa10.6□□□□□ -0.71
LRRC28-216ENST00000559819 POC1B-GALNT4F8VUJ3 575 aa10.6□□□□□ -0.71
LRRC28-216ENST00000559819 SOCS7O14512 581 aa10.6□□□□□ -0.71
LRRC28-216ENST00000559819 HGSO14964 777 aaPredicted RBP10.6□□□□□ -0.71
LRRC28-216ENST00000559819 OGTO15294 1046 aa10.6□□□□□ -0.71
LRRC28-216ENST00000559819 IFNB1P01574 187 aa10.6□□□□□ -0.71
LRRC28-216ENST00000559819 CD19P15391 556 aa10.6□□□□□ -0.71
LRRC28-216ENST00000559819 EDNRBP24530 442 aa10.6□□□□□ -0.71
LRRC28-216ENST00000559819 ATP5DP30049 168 aa10.6□□□□□ -0.71
LRRC28-216ENST00000559819 DUOXA2Q1HG44 320 aa10.6□□□□□ -0.71
LRRC28-216ENST00000559819 ZNF699Q32M78 642 aa10.6□□□□□ -0.71
LRRC28-216ENST00000559819 PTPN20Q4JDL3 420 aa10.6□□□□□ -0.71
LRRC28-216ENST00000559819 SH3D19Q5HYK7 790 aa10.6□□□□□ -0.71
LRRC28-216ENST00000559819 KCNT1Q5JUK3 1230 aa10.6□□□□□ -0.71
LRRC28-216ENST00000559819 PPP1R15BQ5SWA1 713 aa10.6□□□□□ -0.71
LRRC28-216ENST00000559819 ERICH1Q86X53 443 aa10.6□□□□□ -0.71
LRRC28-216ENST00000559819 TMEM35BQ8NCS4 154 aa10.6□□□□□ -0.71
LRRC28-216ENST00000559819 BBOF1Q8ND07 529 aa10.6□□□□□ -0.71
LRRC28-216ENST00000559819 COPS5Q92905 334 aa10.6□□□□□ -0.71
LRRC28-216ENST00000559819 NLRP4Q96MN2 994 aa10.6□□□□□ -0.71
LRRC28-216ENST00000559819 KIF9Q9HAQ2 790 aa10.6□□□□□ -0.71
LRRC28-216ENST00000559819 LGALS13Q9UHV8 139 aa10.6□□□□□ -0.71
LRRC28-216ENST00000559819 TCEA3O75764 348 aa10.6□□□□□ -0.71
LRRC28-216ENST00000559819 DNAJC8O75937 253 aaPredicted RBP10.6□□□□□ -0.71
LRRC28-216ENST00000559819 UBOX5O94941 541 aa10.6□□□□□ -0.71
LRRC28-216ENST00000559819 TJP3O95049 919 aa10.6□□□□□ -0.71
LRRC28-216ENST00000559819 RFC1P35251 1148 aaPredicted RBP10.6□□□□□ -0.71
LRRC28-216ENST00000559819 CETN2P41208 172 aa10.6□□□□□ -0.71
LRRC28-216ENST00000559819 CDH8P55286 799 aa10.6□□□□□ -0.71
LRRC28-216ENST00000559819 MTM1Q13496 603 aa10.6□□□□□ -0.71
LRRC28-216ENST00000559819 CGB2Q6NT52 195 aa10.6□□□□□ -0.71
LRRC28-216ENST00000559819 FAM228AQ86W67 206 aa10.6□□□□□ -0.71
LRRC28-216ENST00000559819 RIOX2Q8IUF8 465 aa10.6□□□□□ -0.71
LRRC28-216ENST00000559819 EMC1Q8N766 993 aa10.6□□□□□ -0.71
LRRC28-216ENST00000559819 PPP1R16BQ96T49 567 aa10.6□□□□□ -0.71
LRRC28-216ENST00000559819 PAIP2Q9BPZ3 127 aaKnown RBP10.6□□□□□ -0.71
LRRC28-216ENST00000559819 SPATC1LQ9H0A9 340 aa10.6□□□□□ -0.71
LRRC28-216ENST00000559819 EURLQ9NYK6 297 aa10.6□□□□□ -0.71
LRRC28-216ENST00000559819 SLC12A4Q9UP95 1085 aa10.6□□□□□ -0.71
LRRC28-216ENST00000559819 EXOC1LA0A1B0GW35 172 aa10.59□□□□□ -0.71
LRRC28-216ENST00000559819 CDH16O75309 829 aa10.59□□□□□ -0.71
LRRC28-216ENST00000559819 CSDE1O75534 798 aaKnown RBP10.59□□□□□ -0.71
LRRC28-216ENST00000559819 KRT19P08727 400 aa10.59□□□□□ -0.71
LRRC28-216ENST00000559819 IBSPP21815 317 aaPredicted RBP10.59□□□□□ -0.71
LRRC28-216ENST00000559819 PSMA2P25787 234 aa10.59□□□□□ -0.71
LRRC28-216ENST00000559819 IL1R2P27930 398 aa10.59□□□□□ -0.71
LRRC28-216ENST00000559819 FOXN2P32314 431 aa10.59□□□□□ -0.71
LRRC28-216ENST00000559819 STX2P32856 288 aa10.59□□□□□ -0.71
LRRC28-216ENST00000559819 CDKN2BP42772 138 aa10.59□□□□□ -0.71
LRRC28-216ENST00000559819 GDF10P55107 478 aa10.59□□□□□ -0.71
LRRC28-216ENST00000559819 PLCB3Q01970 1234 aa10.59□□□□□ -0.71
LRRC28-216ENST00000559819 MCL1Q07820 350 aa10.59□□□□□ -0.71
LRRC28-216ENST00000559819 XRCC4Q13426 336 aa10.59□□□□□ -0.71
LRRC28-216ENST00000559819 NEDD9Q14511 834 aa10.59□□□□□ -0.71
LRRC28-216ENST00000559819 STAT4Q14765 748 aa10.59□□□□□ -0.71
LRRC28-216ENST00000559819 TMEM132AQ24JP5 1023 aa10.59□□□□□ -0.71
LRRC28-216ENST00000559819 SGSM1Q2NKQ1 1148 aa10.59□□□□□ -0.71
LRRC28-216ENST00000559819 WDR72Q3MJ13 1102 aa10.59□□□□□ -0.71
LRRC28-216ENST00000559819 CDCA2Q69YH5 1023 aaPredicted RBP10.59□□□□□ -0.71
LRRC28-216ENST00000559819 METTL7BQ6UX53 244 aa10.59□□□□□ -0.71
LRRC28-216ENST00000559819 ANKMY2Q8IV38 441 aa10.59□□□□□ -0.71
LRRC28-216ENST00000559819 PARP9Q8IXQ6 854 aa10.59□□□□□ -0.71
LRRC28-216ENST00000559819 DHX37Q8IY37 1157 aaKnown RBP10.59□□□□□ -0.71
LRRC28-216ENST00000559819 KIAA0319LQ8IZA0 1049 aa10.59□□□□□ -0.71
LRRC28-216ENST00000559819 ARFGAP1Q8N6T3 406 aa10.59□□□□□ -0.71
LRRC28-216ENST00000559819 TGS1Q96RS0 853 aaKnown RBP10.59□□□□□ -0.71
LRRC28-216ENST00000559819 XYLT2Q9H1B5 865 aa10.59□□□□□ -0.71
LRRC28-216ENST00000559819 TPX2Q9ULW0 747 aaKnown RBP10.59□□□□□ -0.71
LRRC28-216ENST00000559819 USP15Q9Y4E8 981 aaPredicted RBP10.59□□□□□ -0.71
LRRC28-216ENST00000559819 WDR90Q96KV7 1748 aa10.59□□□□□ -0.71
LRRC28-216ENST00000559819 LOC285556D6RIA3 1793 aa10.59□□□□□ -0.71
LRRC28-216ENST00000559819 RASA4BC9J798 803 aa10.59□□□□□ -0.71
LRRC28-216ENST00000559819 INO80B-WBP1J3KQ70 363 aa10.59□□□□□ -0.71
LRRC28-216ENST00000559819 SGK1O00141 431 aa10.59□□□□□ -0.71
LRRC28-216ENST00000559819 RASA4O43374 803 aa10.59□□□□□ -0.71
LRRC28-216ENST00000559819 PIAS1O75925 651 aa10.59□□□□□ -0.71
LRRC28-216ENST00000559819 LSM8O95777 96 aaKnown RBP10.59□□□□□ -0.71
LRRC28-216ENST00000559819 CD48P09326 243 aa10.59□□□□□ -0.71
LRRC28-216ENST00000559819 CLCN3P51790 818 aa10.59□□□□□ -0.71
LRRC28-216ENST00000559819 VCPP55072 806 aaKnown RBP10.59□□□□□ -0.71
LRRC28-216ENST00000559819 OASLQ15646 514 aaKnown RBP10.59□□□□□ -0.71
LRRC28-216ENST00000559819 MAPK6Q16659 721 aa10.59□□□□□ -0.71
LRRC28-216ENST00000559819 IER5Q5VY09 327 aa10.59□□□□□ -0.71
LRRC28-216ENST00000559819 FAM47EQ6ZV65 393 aa10.59□□□□□ -0.71
LRRC28-216ENST00000559819 ZBTB8OSQ8IWT0 167 aa10.59□□□□□ -0.71
LRRC28-216ENST00000559819 MAML1Q92585 1016 aa10.59□□□□□ -0.71
LRRC28-216ENST00000559819 P3H4Q92791 437 aa10.59□□□□□ -0.71
LRRC28-216ENST00000559819 THOC1Q96FV9 657 aaKnown RBP10.59□□□□□ -0.71
LRRC28-216ENST00000559819 GPR20Q99678 358 aa10.59□□□□□ -0.71
LRRC28-216ENST00000559819 INO80BQ9C086 356 aaPredicted RBP10.59□□□□□ -0.71
LRRC28-216ENST00000559819 SDCBP2Q9H190 292 aa10.59□□□□□ -0.71
LRRC28-216ENST00000559819 MINDY3Q9H8M7 445 aa10.59□□□□□ -0.71
LRRC28-216ENST00000559819 VPS37BQ9H9H4 285 aa10.59□□□□□ -0.71
LRRC28-216ENST00000559819 GPRC5DQ9NZD1 345 aa10.59□□□□□ -0.71
LRRC28-216ENST00000559819 HMGXB4Q9UGU5 601 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms