RNA–Protein interactions for RNA: ENST00000559771.5

USP3-215, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-215ENST00000559771 TANGO2Q6ICL3 276 aa6.36□□□□□ -1.39
USP3-215ENST00000559771 SLC8B1Q6J4K2 584 aa6.36□□□□□ -1.39
USP3-215ENST00000559771 C1orf186Q6ZWK4 172 aa6.36□□□□□ -1.39
USP3-215ENST00000559771 CCDC83Q8IWF9 413 aa6.36□□□□□ -1.39
USP3-215ENST00000559771 DCLK2Q8N568 766 aa6.36□□□□□ -1.39
USP3-215ENST00000559771 DEPTORQ8TB45 409 aa6.36□□□□□ -1.39
USP3-215ENST00000559771 ING5Q8WYH8 240 aa6.36□□□□□ -1.39
USP3-215ENST00000559771 NELL1Q92832 810 aa6.36□□□□□ -1.39
USP3-215ENST00000559771 C18orf25Q96B23 403 aaPredicted RBP6.36□□□□□ -1.39
USP3-215ENST00000559771 TCEAL4Q96EI5 215 aa6.36□□□□□ -1.39
USP3-215ENST00000559771 C8orf76Q96K31 380 aa6.36□□□□□ -1.39
USP3-215ENST00000559771 ZBTB45Q96K62 511 aaPredicted RBP6.36□□□□□ -1.39
USP3-215ENST00000559771 RUSC1Q9BVN2 902 aa6.36□□□□□ -1.39
USP3-215ENST00000559771 HAPLN2Q9GZV7 340 aa6.36□□□□□ -1.39
USP3-215ENST00000559771 UPF2Q9HAU5 1272 aaKnown RBP6.36□□□□□ -1.39
USP3-215ENST00000559771 RAB6BQ9NRW1 208 aa6.36□□□□□ -1.39
USP3-215ENST00000559771 DDX19AQ9NUU7 478 aaKnown RBP6.36□□□□□ -1.39
USP3-215ENST00000559771 KCNH3Q9ULD8 1083 aa6.36□□□□□ -1.39
USP3-215ENST00000559771 KIAA1024Q9UPX6 916 aa6.36□□□□□ -1.39
USP3-215ENST00000559771 PCDHB6Q9Y5E3 794 aa6.36□□□□□ -1.39
USP3-215ENST00000559771 CITO14578 2027 aa6.36□□□□□ -1.39
USP3-215ENST00000559771 TICRRQ7Z2Z1 1910 aa6.35□□□□□ -1.39
USP3-215ENST00000559771 ANK1P16157 1881 aa6.35□□□□□ -1.39
USP3-215ENST00000559771 TSC2P49815 1807 aa6.35□□□□□ -1.39
USP3-215ENST00000559771 MED19A0JLT2 244 aaPredicted RBP6.35□□□□□ -1.39
USP3-215ENST00000559771 K7ERI5 159 aa6.35□□□□□ -1.39
USP3-215ENST00000559771 HIP1RO75146 1068 aa6.35□□□□□ -1.39
USP3-215ENST00000559771 ECI2O75521 394 aa6.35□□□□□ -1.39
USP3-215ENST00000559771 RHOP08100 348 aa6.35□□□□□ -1.39
USP3-215ENST00000559771 TDGF1P13385 188 aa6.35□□□□□ -1.39
USP3-215ENST00000559771 KCNE1P15382 129 aa6.35□□□□□ -1.39
USP3-215ENST00000559771 U2AF2P26368 475 aaKnown RBP eCLIP6.35□□□□□ -1.394e-9■■■■□ 20.4
USP3-215ENST00000559771 CCT6AP40227 531 aaKnown RBP6.35□□□□□ -1.39
USP3-215ENST00000559771 EFNA5P52803 228 aa6.35□□□□□ -1.39
USP3-215ENST00000559771 PEX3P56589 373 aa6.35□□□□□ -1.39
USP3-215ENST00000559771 OSTNP61366 133 aa6.35□□□□□ -1.39
USP3-215ENST00000559771 PRKCQQ04759 706 aa6.35□□□□□ -1.39
USP3-215ENST00000559771 TRIM29Q14134 588 aa6.35□□□□□ -1.39
USP3-215ENST00000559771 PDIA5Q14554 519 aa6.35□□□□□ -1.39
USP3-215ENST00000559771 PPP2R5AQ15172 486 aa6.35□□□□□ -1.39
USP3-215ENST00000559771 MLF2Q15773 248 aaPredicted RBP6.35□□□□□ -1.39
USP3-215ENST00000559771 SLC10A6Q3KNW5 377 aa6.35□□□□□ -1.39
USP3-215ENST00000559771 PABPC1LQ4VXU2 614 aaKnown RBP6.35□□□□□ -1.39
USP3-215ENST00000559771 SEZ6Q53EL9 994 aa6.35□□□□□ -1.39
USP3-215ENST00000559771 RINT1Q6NUQ1 792 aa6.35□□□□□ -1.39
USP3-215ENST00000559771 PDXDC1Q6P996 788 aa6.35□□□□□ -1.39
USP3-215ENST00000559771 MTSS1LQ765P7 747 aa6.35□□□□□ -1.39
USP3-215ENST00000559771 ERMP1Q7Z2K6 904 aa6.35□□□□□ -1.39
USP3-215ENST00000559771 TCEAL8Q8IYN2 117 aa6.35□□□□□ -1.39
USP3-215ENST00000559771 KIAA2013Q8IYS2 634 aa6.35□□□□□ -1.39
USP3-215ENST00000559771 ZNF461Q8TAF7 563 aa6.35□□□□□ -1.39
USP3-215ENST00000559771 ERMNQ8TAM6 284 aa6.35□□□□□ -1.39
USP3-215ENST00000559771 LRRC15Q8TF66 581 aa6.35□□□□□ -1.39
USP3-215ENST00000559771 KIFAP3Q92845 792 aa6.35□□□□□ -1.39
USP3-215ENST00000559771 CLDN23Q96B33 292 aa6.35□□□□□ -1.39
USP3-215ENST00000559771 MCRS1Q96EZ8 462 aa6.35□□□□□ -1.39
USP3-215ENST00000559771 ZSWIM3Q96MP5 696 aa6.35□□□□□ -1.39
USP3-215ENST00000559771 UROC1Q96N76 676 aa6.35□□□□□ -1.39
USP3-215ENST00000559771 PNMA5Q96PV4 448 aa6.35□□□□□ -1.39
USP3-215ENST00000559771 ADPGKQ9BRR6 497 aa6.35□□□□□ -1.39
USP3-215ENST00000559771 LLPHQ9BRT6 129 aaKnown RBP6.35□□□□□ -1.39
USP3-215ENST00000559771 NTPCRQ9BSD7 190 aaKnown RBP6.35□□□□□ -1.39
USP3-215ENST00000559771 TARS2Q9BW92 718 aaKnown RBP6.35□□□□□ -1.39
USP3-215ENST00000559771 OSBPL6Q9BZF3 934 aa6.35□□□□□ -1.39
USP3-215ENST00000559771 SEMA4AQ9H3S1 761 aa6.35□□□□□ -1.39
USP3-215ENST00000559771 LTB4R2Q9NPC1 389 aa6.35□□□□□ -1.39
USP3-215ENST00000559771 CNTN3Q9P232 1028 aa6.35□□□□□ -1.39
USP3-215ENST00000559771 LRWD1Q9UFC0 647 aa6.35□□□□□ -1.39
USP3-215ENST00000559771 POLIQ9UNA4 740 aa6.35□□□□□ -1.39
USP3-215ENST00000559771 LIMCH1Q9UPQ0 1083 aa6.35□□□□□ -1.39
USP3-215ENST00000559771 EP300Q09472 2414 aaPredicted RBP6.35□□□□□ -1.39
USP3-215ENST00000559771 PHLPP2Q6ZVD8 1323 aa6.34□□□□□ -1.39
USP3-215ENST00000559771 FAM170BA6NMN3 283 aa6.34□□□□□ -1.39
USP3-215ENST00000559771 CCDC169A6NNP5 214 aa6.34□□□□□ -1.39
USP3-215ENST00000559771 SFI1A8K8P3 1242 aa6.34□□□□□ -1.39
USP3-215ENST00000559771 ARNTLO00327 626 aa6.34□□□□□ -1.39
USP3-215ENST00000559771 PODXLO00592 558 aa6.34□□□□□ -1.39
USP3-215ENST00000559771 SLC16A4O15374 487 aa6.34□□□□□ -1.39
USP3-215ENST00000559771 FAM189A1O60320 539 aa6.34□□□□□ -1.39
USP3-215ENST00000559771 LILRB5O75023 590 aa6.34□□□□□ -1.39
USP3-215ENST00000559771 XYLBO75191 536 aa6.34□□□□□ -1.39
USP3-215ENST00000559771 ALBP02768 609 aa6.34□□□□□ -1.39
USP3-215ENST00000559771 MCF2P10911 925 aa6.34□□□□□ -1.39
USP3-215ENST00000559771 ATF2P15336 505 aa6.34□□□□□ -1.39
USP3-215ENST00000559771 TGM1P22735 817 aa6.34□□□□□ -1.39
USP3-215ENST00000559771 TARSP26639 723 aaKnown RBP6.34□□□□□ -1.39
USP3-215ENST00000559771 TRAPPC10P48553 1259 aa6.34□□□□□ -1.39
USP3-215ENST00000559771 ZBTB6Q15916 424 aa6.34□□□□□ -1.39
USP3-215ENST00000559771 ZNF528Q3MIS6 628 aa6.34□□□□□ -1.39
USP3-215ENST00000559771 FAM78AQ5JUQ0 283 aa6.34□□□□□ -1.39
USP3-215ENST00000559771 HAUS3Q68CZ6 603 aa6.34□□□□□ -1.39
USP3-215ENST00000559771 TSSK4Q6SA08 328 aa6.34□□□□□ -1.39
USP3-215ENST00000559771 ANKS3Q6ZW76 656 aa6.34□□□□□ -1.39
USP3-215ENST00000559771 RTL10Q7L3V2 364 aa6.34□□□□□ -1.39
USP3-215ENST00000559771 MAP4K3Q8IVH8 894 aa6.34□□□□□ -1.39
USP3-215ENST00000559771 ZBTB44Q8NCP5 570 aa6.34□□□□□ -1.39
USP3-215ENST00000559771 TMEM161BQ8NDZ6 487 aa6.34□□□□□ -1.39
USP3-215ENST00000559771 BEST2Q8NFU1 509 aa6.34□□□□□ -1.39
USP3-215ENST00000559771 RSPRY1Q96DX4 576 aa6.34□□□□□ -1.39
USP3-215ENST00000559771 IFT74Q96LB3 600 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms