RNA–Protein interactions for RNA: ENST00000559556.5

TPM1-220, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TPM1, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-220ENST00000559556 AKAP13Q12802 2813 aa14.16□□□□□ -0.14
TPM1-220ENST00000559556 IGF2RP11717 2491 aa14.16□□□□□ -0.14
TPM1-220ENST00000559556 TISP43B9A030 160 aa14.16□□□□□ -0.14
TPM1-220ENST00000559556 ANKRD63C9JTQ0 380 aa14.16□□□□□ -0.14
TPM1-220ENST00000559556 DPYSL4O14531 572 aa14.16□□□□□ -0.14
TPM1-220ENST00000559556 KRT18P05783 430 aaKnown RBP14.16□□□□□ -0.14
TPM1-220ENST00000559556 CDC25CP30307 473 aa14.16□□□□□ -0.14
TPM1-220ENST00000559556 TUFMP49411 452 aaKnown RBP14.16□□□□□ -0.14
TPM1-220ENST00000559556 PLCB2Q00722 1185 aa14.16□□□□□ -0.14
TPM1-220ENST00000559556 POU5F1Q01860 360 aaKnown RBP14.16□□□□□ -0.14
TPM1-220ENST00000559556 GRIN1Q05586 938 aa14.16□□□□□ -0.14
TPM1-220ENST00000559556 SMARCB1Q12824 385 aa14.16□□□□□ -0.14
TPM1-220ENST00000559556 VEPH1Q14D04 833 aa14.16□□□□□ -0.14
TPM1-220ENST00000559556 Q6ZS52 159 aa14.16□□□□□ -0.14
TPM1-220ENST00000559556 BRAPQ7Z569 592 aa14.16□□□□□ -0.14
TPM1-220ENST00000559556 SPPL2BQ8TCT7 592 aa14.16□□□□□ -0.14
TPM1-220ENST00000559556 C2orf15Q8WU43 125 aaKnown RBP14.16□□□□□ -0.14
TPM1-220ENST00000559556 ZFYVE19Q96K21 471 aa14.16□□□□□ -0.14
TPM1-220ENST00000559556 SEPT5Q99719 369 aaPredicted RBP14.16□□□□□ -0.14
TPM1-220ENST00000559556 LPIN3Q9BQK8 851 aa14.16□□□□□ -0.14
TPM1-220ENST00000559556 RTKNQ9BST9 563 aa14.16□□□□□ -0.14
TPM1-220ENST00000559556 TASP1Q9H6P5 420 aa14.16□□□□□ -0.14
TPM1-220ENST00000559556 RBM12Q9NTZ6 932 aaKnown RBP14.16□□□□□ -0.14
TPM1-220ENST00000559556 GTSE1Q9NYZ3 720 aa14.16□□□□□ -0.14
TPM1-220ENST00000559556 ZMYM5Q9UJ78 669 aa14.16□□□□□ -0.14
TPM1-220ENST00000559556 AGO2Q9UKV8 859 aaKnown RBP14.16□□□□□ -0.14
TPM1-220ENST00000559556 CACNA1EQ15878 2313 aa14.16□□□□□ -0.14
TPM1-220ENST00000559556 WDFY3Q8IZQ1 3526 aa14.15□□□□□ -0.14
TPM1-220ENST00000559556 PPP1R37O75864 691 aa14.15□□□□□ -0.14
TPM1-220ENST00000559556 RETP07949 1114 aa14.15□□□□□ -0.14
TPM1-220ENST00000559556 HOXA6P31267 233 aa14.15□□□□□ -0.14
TPM1-220ENST00000559556 CNR2P34972 360 aa14.15□□□□□ -0.14
TPM1-220ENST00000559556 TAF6P49848 677 aa14.15□□□□□ -0.14
TPM1-220ENST00000559556 CYP4F8P98187 520 aa14.15□□□□□ -0.14
TPM1-220ENST00000559556 DMWDQ09019 674 aa14.15□□□□□ -0.14
TPM1-220ENST00000559556 SPEM2Q0P670 501 aa14.15□□□□□ -0.14
TPM1-220ENST00000559556 LPAL2Q16609 132 aa14.15□□□□□ -0.14
TPM1-220ENST00000559556 ZC2HC1CQ53FD0 456 aaPredicted RBP14.15□□□□□ -0.14
TPM1-220ENST00000559556 ADALQ6DHV7 355 aa14.15□□□□□ -0.14
TPM1-220ENST00000559556 SLFN12LQ6IEE8 588 aa14.15□□□□□ -0.14
TPM1-220ENST00000559556 PRR23BQ6ZRT6 265 aa14.15□□□□□ -0.14
TPM1-220ENST00000559556 METTL23Q86XA0 190 aa14.15□□□□□ -0.14
TPM1-220ENST00000559556 GPIHBP1Q8IV16 184 aa14.15□□□□□ -0.14
TPM1-220ENST00000559556 EFCAB13Q8IY85 973 aa14.15□□□□□ -0.14
TPM1-220ENST00000559556 BPIFB1Q8TDL5 484 aa14.15□□□□□ -0.14
TPM1-220ENST00000559556 HVCN1Q96D96 273 aa14.15□□□□□ -0.14
TPM1-220ENST00000559556 GCNAQ96QF7 691 aa14.15□□□□□ -0.14
TPM1-220ENST00000559556 ZHX3Q9H4I2 956 aa14.15□□□□□ -0.14
TPM1-220ENST00000559556 DPP3Q9NY33 737 aa14.15□□□□□ -0.14
TPM1-220ENST00000559556 CHURC1-FNTBB4DL54 471 aa14.14□□□□□ -0.15
TPM1-220ENST00000559556 CYB561D2O14569 222 aa14.14□□□□□ -0.15
TPM1-220ENST00000559556 FNTBP49356 437 aa14.14□□□□□ -0.15
TPM1-220ENST00000559556 MCM2P49736 904 aa14.14□□□□□ -0.15
TPM1-220ENST00000559556 TNK2Q07912 1038 aa14.14□□□□□ -0.15
TPM1-220ENST00000559556 SIM2Q14190 667 aaPredicted RBP14.14□□□□□ -0.15
TPM1-220ENST00000559556 PON2Q15165 354 aa14.14□□□□□ -0.15
TPM1-220ENST00000559556 ITPRIPL2Q3MIP1 535 aa14.14□□□□□ -0.15
TPM1-220ENST00000559556 MGAT5BQ3V5L5 792 aa14.14□□□□□ -0.15
TPM1-220ENST00000559556 SV2CQ496J9 727 aa14.14□□□□□ -0.15
TPM1-220ENST00000559556 CRELD2Q6UXH1 353 aaPredicted RBP14.14□□□□□ -0.15
TPM1-220ENST00000559556 LONP2Q86WA8 852 aa14.14□□□□□ -0.15
TPM1-220ENST00000559556 NT5DC4Q86YG4 428 aa14.14□□□□□ -0.15
TPM1-220ENST00000559556 THEM5Q8N1Q8 247 aa14.14□□□□□ -0.15
TPM1-220ENST00000559556 SYNPOQ8N3V7 929 aa14.14□□□□□ -0.15
TPM1-220ENST00000559556 RASSF8Q8NHQ8 419 aa14.14□□□□□ -0.15
TPM1-220ENST00000559556 FAM200AQ8TCP9 573 aa14.14□□□□□ -0.15
TPM1-220ENST00000559556 PYM1Q9BRP8 204 aaKnown RBP14.14□□□□□ -0.15
TPM1-220ENST00000559556 C2orf42Q9NWW7 574 aa14.14□□□□□ -0.15
TPM1-220ENST00000559556 SMC3Q9UQE7 1217 aa14.14□□□□□ -0.15
TPM1-220ENST00000559556 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.14□□□□□ -0.15
TPM1-220ENST00000559556 ASPMQ8IZT6 3477 aa14.13□□□□□ -0.15
TPM1-220ENST00000559556 HRO43593 1189 aa14.13□□□□□ -0.15
TPM1-220ENST00000559556 IL18RAPO95256 599 aa14.13□□□□□ -0.15
TPM1-220ENST00000559556 HAPLN1P10915 354 aaPredicted RBP14.13□□□□□ -0.15
TPM1-220ENST00000559556 SF3A1Q15459 793 aaKnown RBP14.13□□□□□ -0.15
TPM1-220ENST00000559556 WSCD1Q658N2 575 aa14.13□□□□□ -0.15
TPM1-220ENST00000559556 LARP1BQ659C4 914 aaKnown RBP14.13□□□□□ -0.15
TPM1-220ENST00000559556 ZNF720Q7Z2F6 126 aa14.13□□□□□ -0.15
TPM1-220ENST00000559556 TMEM150AQ86TG1 271 aa14.13□□□□□ -0.15
TPM1-220ENST00000559556 LRRTM3Q86VH5 581 aa14.13□□□□□ -0.15
TPM1-220ENST00000559556 SFR1Q86XK3 245 aa14.13□□□□□ -0.15
TPM1-220ENST00000559556 CMTM8Q8IZV2 173 aa14.13□□□□□ -0.15
TPM1-220ENST00000559556 TTC8Q8TAM2 541 aa14.13□□□□□ -0.15
TPM1-220ENST00000559556 NETO1Q8TDF5 533 aa14.13□□□□□ -0.15
TPM1-220ENST00000559556 ZNF560Q96MR9 790 aa14.13□□□□□ -0.15
TPM1-220ENST00000559556 STRA6Q9BX79 667 aa14.13□□□□□ -0.15
TPM1-220ENST00000559556 SLC46A2Q9BY10 475 aa14.13□□□□□ -0.15
TPM1-220ENST00000559556 IKZF4Q9H2S9 585 aa14.13□□□□□ -0.15
TPM1-220ENST00000559556 ABI2Q9NYB9 513 aaPredicted RBP14.13□□□□□ -0.15
TPM1-220ENST00000559556 SEL1LQ9UBV2 794 aa14.13□□□□□ -0.15
TPM1-220ENST00000559556 STK17AQ9UEE5 414 aa14.13□□□□□ -0.15
TPM1-220ENST00000559556 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.13□□□□□ -0.15
TPM1-220ENST00000559556 KPNA7A9QM74 516 aa14.12□□□□□ -0.15
TPM1-220ENST00000559556 SLC30A4O14863 429 aa14.12□□□□□ -0.15
TPM1-220ENST00000559556 HMGA1P17096 107 aaKnown RBP14.12□□□□□ -0.15
TPM1-220ENST00000559556 DDX6P26196 483 aaKnown RBP eCLIP14.12□□□□□ -0.15
TPM1-220ENST00000559556 ADSSP30520 456 aa14.12□□□□□ -0.15
TPM1-220ENST00000559556 DDIT3P35638 169 aa14.12□□□□□ -0.15
TPM1-220ENST00000559556 NLRP12P59046 1061 aa14.12□□□□□ -0.15
TPM1-220ENST00000559556 SRSF5Q13243 272 aaKnown RBP14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms