RNA–Protein interactions for RNA: ENST00000559511.5

SPG11-217, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 2

Gene SPG11, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-217ENST00000559511 MYCBPAPQ8TBZ2 947 aa11.7□□□□□ -0.54
SPG11-217ENST00000559511 GRK7Q8WTQ7 553 aa11.7□□□□□ -0.54
SPG11-217ENST00000559511 PGM2Q96G03 612 aa11.7□□□□□ -0.54
SPG11-217ENST00000559511 NFKBIZQ9BYH8 718 aa11.7□□□□□ -0.54
SPG11-217ENST00000559511 CDC42EP4Q9H3Q1 356 aaKnown RBP11.7□□□□□ -0.54
SPG11-217ENST00000559511 RPF1Q9H9Y2 349 aaKnown RBP11.7□□□□□ -0.54
SPG11-217ENST00000559511 NMRK2Q9NPI5 230 aa11.7□□□□□ -0.54
SPG11-217ENST00000559511 PPANQ9NQ55 473 aaKnown RBP11.7□□□□□ -0.54
SPG11-217ENST00000559511 A0A087WZ62 844 aa11.69□□□□□ -0.54
SPG11-217ENST00000559511 LACTBL1A8MY62 500 aa11.69□□□□□ -0.54
SPG11-217ENST00000559511 E7EVH7 732 aa11.69□□□□□ -0.54
SPG11-217ENST00000559511 ASAP2O43150 1006 aa11.69□□□□□ -0.54
SPG11-217ENST00000559511 ADCY6O43306 1168 aa11.69□□□□□ -0.54
SPG11-217ENST00000559511 IL18RAPO95256 599 aa11.69□□□□□ -0.54
SPG11-217ENST00000559511 GAS8O95995 478 aa11.69□□□□□ -0.54
SPG11-217ENST00000559511 KRT10P13645 584 aa11.69□□□□□ -0.54
SPG11-217ENST00000559511 ITIH2P19823 946 aa11.69□□□□□ -0.54
SPG11-217ENST00000559511 EIF4BP23588 611 aaKnown RBP11.69□□□□□ -0.54
SPG11-217ENST00000559511 CDH8P55286 799 aa11.69□□□□□ -0.54
SPG11-217ENST00000559511 HUNKP57058 714 aa11.69□□□□□ -0.54
SPG11-217ENST00000559511 IFI35P80217 286 aaPredicted RBP11.69□□□□□ -0.54
SPG11-217ENST00000559511 NFX1Q12986 1120 aaKnown RBP11.69□□□□□ -0.54
SPG11-217ENST00000559511 ORC1Q13415 861 aa11.69□□□□□ -0.54
SPG11-217ENST00000559511 BYSLQ13895 437 aaKnown RBP11.69□□□□□ -0.54
SPG11-217ENST00000559511 DUSP28Q4G0W2 176 aa11.69□□□□□ -0.54
SPG11-217ENST00000559511 PRUNE1Q86TP1 453 aa11.69□□□□□ -0.54
SPG11-217ENST00000559511 ERICH1Q86X53 443 aa11.69□□□□□ -0.54
SPG11-217ENST00000559511 LINC01465Q8N7H1 131 aa11.69□□□□□ -0.54
SPG11-217ENST00000559511 ZNF473Q8WTR7 871 aaKnown RBP11.69□□□□□ -0.54
SPG11-217ENST00000559511 ACSF2Q96CM8 615 aaPredicted RBP11.69□□□□□ -0.54
SPG11-217ENST00000559511 CPB2Q96IY4 423 aa11.69□□□□□ -0.54
SPG11-217ENST00000559511 SLITRK1Q96PX8 696 aa11.69□□□□□ -0.54
SPG11-217ENST00000559511 CCT8L2Q96SF2 557 aa11.69□□□□□ -0.54
SPG11-217ENST00000559511 FDXACB1Q9BRP7 624 aaPredicted RBP11.69□□□□□ -0.54
SPG11-217ENST00000559511 ZNF518BQ9C0D4 1074 aa11.69□□□□□ -0.54
SPG11-217ENST00000559511 SDCBP2Q9H190 292 aa11.69□□□□□ -0.54
SPG11-217ENST00000559511 PRMT7Q9NVM4 692 aaPredicted RBP11.69□□□□□ -0.54
SPG11-217ENST00000559511 TJP2Q9UDY2 1190 aa11.69□□□□□ -0.54
SPG11-217ENST00000559511 CPA4Q9UI42 421 aa11.69□□□□□ -0.54
SPG11-217ENST00000559511 CYTH4Q9UIA0 394 aa11.69□□□□□ -0.54
SPG11-217ENST00000559511 COL1A2P08123 1366 aa11.69□□□□□ -0.54
SPG11-217ENST00000559511 SLC15A5A6NIM6 579 aa11.69□□□□□ -0.54
SPG11-217ENST00000559511 VTNP04004 478 aa11.69□□□□□ -0.54
SPG11-217ENST00000559511 PAEPP09466 180 aa11.69□□□□□ -0.54
SPG11-217ENST00000559511 STAG3L1P0CL83 205 aa11.69□□□□□ -0.54
SPG11-217ENST00000559511 ATF2P15336 505 aa11.69□□□□□ -0.54
SPG11-217ENST00000559511 PHKA2P46019 1235 aa11.69□□□□□ -0.54
SPG11-217ENST00000559511 SLCO1A2P46721 670 aa11.69□□□□□ -0.54
SPG11-217ENST00000559511 CORO7P57737 925 aa11.69□□□□□ -0.54
SPG11-217ENST00000559511 LACTBP83111 547 aaPredicted RBP11.69□□□□□ -0.54
SPG11-217ENST00000559511 ACVR2BQ13705 512 aa11.69□□□□□ -0.54
SPG11-217ENST00000559511 WDR72Q3MJ13 1102 aa11.69□□□□□ -0.54
SPG11-217ENST00000559511 PTPN20Q4JDL3 420 aa11.69□□□□□ -0.54
SPG11-217ENST00000559511 JADE1Q6IE81 842 aa11.69□□□□□ -0.54
SPG11-217ENST00000559511 DCUN1D2Q6PH85 259 aa11.69□□□□□ -0.54
SPG11-217ENST00000559511 MFSD7Q6UXD7 560 aa11.69□□□□□ -0.54
SPG11-217ENST00000559511 C10orf67Q8IYJ2 551 aa11.69□□□□□ -0.54
SPG11-217ENST00000559511 C3orf20Q8ND61 904 aa11.69□□□□□ -0.54
SPG11-217ENST00000559511 CXorf38Q8TB03 319 aa11.69□□□□□ -0.54
SPG11-217ENST00000559511 MDM1Q8TC05 714 aa11.69□□□□□ -0.54
SPG11-217ENST00000559511 PWWP2AQ96N64 755 aa11.69□□□□□ -0.54
SPG11-217ENST00000559511 BCO2Q9BYV7 579 aa11.69□□□□□ -0.54
SPG11-217ENST00000559511 ABHD16BQ9H3Z7 469 aa11.69□□□□□ -0.54
SPG11-217ENST00000559511 PDZD7Q9H5P4 517 aa11.69□□□□□ -0.54
SPG11-217ENST00000559511 SMYD3Q9H7B4 428 aa11.69□□□□□ -0.54
SPG11-217ENST00000559511 HOMER3Q9NSC5 361 aa11.69□□□□□ -0.54
SPG11-217ENST00000559511 DNAJC17Q9NVM6 304 aaKnown RBP11.69□□□□□ -0.54
SPG11-217ENST00000559511 HMGXB4Q9UGU5 601 aa11.69□□□□□ -0.54
SPG11-217ENST00000559511 CENPFP49454 3210 aa11.68□□□□□ -0.54
SPG11-217ENST00000559511 DNAH12Q6ZR08 3092 aa11.68□□□□□ -0.54
SPG11-217ENST00000559511 SRRM3A6NNA2 597 aaPredicted RBP11.68□□□□□ -0.54
SPG11-217ENST00000559511 H3BRB1 525 aa11.68□□□□□ -0.54
SPG11-217ENST00000559511 IGF2BP3O00425 579 aaKnown RBP eCLIP11.68□□□□□ -0.54
SPG11-217ENST00000559511 MAGEB2O15479 319 aa11.68□□□□□ -0.54
SPG11-217ENST00000559511 RGS16O15492 202 aaPredicted RBP11.68□□□□□ -0.54
SPG11-217ENST00000559511 TRAPPC3O43617 180 aa11.68□□□□□ -0.54
SPG11-217ENST00000559511 ECM2O94769 699 aaPredicted RBP11.68□□□□□ -0.54
SPG11-217ENST00000559511 ACSL3O95573 720 aa11.68□□□□□ -0.54
SPG11-217ENST00000559511 FAM107AO95990 144 aa11.68□□□□□ -0.54
SPG11-217ENST00000559511 KRT1P04264 644 aa11.68□□□□□ -0.54
SPG11-217ENST00000559511 ITGB3P05106 788 aa11.68□□□□□ -0.54
SPG11-217ENST00000559511 CD19P15391 556 aa11.68□□□□□ -0.54
SPG11-217ENST00000559511 ADCY8P40145 1251 aa11.68□□□□□ -0.54
SPG11-217ENST00000559511 RAD23BP54727 409 aa11.68□□□□□ -0.54
SPG11-217ENST00000559511 FAM187BQ17R55 369 aa11.68□□□□□ -0.54
SPG11-217ENST00000559511 ZNF667Q5HYK9 610 aa11.68□□□□□ -0.54
SPG11-217ENST00000559511 KAZNQ674X7 775 aa11.68□□□□□ -0.54
SPG11-217ENST00000559511 TRMT10CQ7L0Y3 403 aaKnown RBP11.68□□□□□ -0.54
SPG11-217ENST00000559511 RASAL3Q86YV0 1011 aa11.68□□□□□ -0.54
SPG11-217ENST00000559511 RCOR2Q8IZ40 523 aa11.68□□□□□ -0.54
SPG11-217ENST00000559511 RAPGEF5Q92565 580 aa11.68□□□□□ -0.54
SPG11-217ENST00000559511 SCLT1Q96NL6 688 aa11.68□□□□□ -0.54
SPG11-217ENST00000559511 TWNKQ96RR1 684 aa11.68□□□□□ -0.54
SPG11-217ENST00000559511 TMEM109Q9BVC6 243 aa11.68□□□□□ -0.54
SPG11-217ENST00000559511 FAM107BQ9H098 131 aa11.68□□□□□ -0.54
SPG11-217ENST00000559511 ADAM7Q9H2U9 754 aa11.68□□□□□ -0.54
SPG11-217ENST00000559511 TUT1Q9H6E5 874 aaKnown RBP11.68□□□□□ -0.54
SPG11-217ENST00000559511 FEZ2Q9UHY8 353 aaPredicted RBP11.68□□□□□ -0.54
SPG11-217ENST00000559511 FAM169AQ9Y6X4 670 aa11.68□□□□□ -0.54
SPG11-217ENST00000559511 MMP3P08254 477 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 97.8 ms