RNA–Protein interactions for RNA: ENST00000559433.5

LRRC28-214, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 1,045 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-214ENST00000559433 ACAT1P24752 427 aaKnown RBP13.52□□□□□ -0.25
LRRC28-214ENST00000559433 TUFMP49411 452 aaKnown RBP13.52□□□□□ -0.25
LRRC28-214ENST00000559433 MYL7Q01449 175 aa13.52□□□□□ -0.25
LRRC28-214ENST00000559433 SMARCB1Q12824 385 aa13.52□□□□□ -0.25
LRRC28-214ENST00000559433 MGAT5BQ3V5L5 792 aa13.52□□□□□ -0.25
LRRC28-214ENST00000559433 TRAPPC11Q7Z392 1133 aa13.52□□□□□ -0.25
LRRC28-214ENST00000559433 LRRTM3Q86VH5 581 aa13.52□□□□□ -0.25
LRRC28-214ENST00000559433 ADGRF2Q8IZF7 708 aa13.52□□□□□ -0.25
LRRC28-214ENST00000559433 TOP6BLQ8N6T0 577 aa13.52□□□□□ -0.25
LRRC28-214ENST00000559433 FAM200AQ8TCP9 573 aa13.52□□□□□ -0.25
LRRC28-214ENST00000559433 SHDQ96IW2 340 aa13.52□□□□□ -0.25
LRRC28-214ENST00000559433 RPP25Q9BUL9 199 aaKnown RBP13.52□□□□□ -0.25
LRRC28-214ENST00000559433 DNAJC25Q9H1X3 360 aa13.52□□□□□ -0.25
LRRC28-214ENST00000559433 KCTD10Q9H3F6 313 aa13.52□□□□□ -0.25
LRRC28-214ENST00000559433 ABI2Q9NYB9 513 aaPredicted RBP13.52□□□□□ -0.25
LRRC28-214ENST00000559433 CA14Q9ULX7 337 aa13.52□□□□□ -0.25
LRRC28-214ENST00000559433 NUP210Q8TEM1 1887 aaPredicted RBP13.51□□□□□ -0.25
LRRC28-214ENST00000559433 PDXKO00764 312 aa13.51□□□□□ -0.25
LRRC28-214ENST00000559433 NRG2O14511 850 aaPredicted RBP13.51□□□□□ -0.25
LRRC28-214ENST00000559433 MICAL2O94851 1124 aa13.51□□□□□ -0.25
LRRC28-214ENST00000559433 NR3C1P04150 777 aa13.51□□□□□ -0.25
LRRC28-214ENST00000559433 GJA1P17302 382 aa13.51□□□□□ -0.25
LRRC28-214ENST00000559433 CASP4P49662 377 aa13.51□□□□□ -0.25
LRRC28-214ENST00000559433 EPHA5P54756 1037 aa13.51□□□□□ -0.25
LRRC28-214ENST00000559433 PFKPQ01813 784 aa13.51□□□□□ -0.25
LRRC28-214ENST00000559433 NHLH1Q02575 133 aa13.51□□□□□ -0.25
LRRC28-214ENST00000559433 VEPH1Q14D04 833 aa13.51□□□□□ -0.25
LRRC28-214ENST00000559433 SOWAHAQ2M3V2 549 aa13.51□□□□□ -0.25
LRRC28-214ENST00000559433 ITIH5Q86UX2 942 aa13.51□□□□□ -0.25
LRRC28-214ENST00000559433 SLC9A9Q8IVB4 645 aa13.51□□□□□ -0.25
LRRC28-214ENST00000559433 FMR1NBQ8N0W7 255 aaPredicted RBP13.51□□□□□ -0.25
LRRC28-214ENST00000559433 SPATA18Q8TC71 538 aa13.51□□□□□ -0.25
LRRC28-214ENST00000559433 SPPL2BQ8TCT7 592 aa13.51□□□□□ -0.25
LRRC28-214ENST00000559433 GPR152Q8TDT2 470 aa13.51□□□□□ -0.25
LRRC28-214ENST00000559433 ATOH1Q92858 354 aaPredicted RBP13.51□□□□□ -0.25
LRRC28-214ENST00000559433 LPIN3Q9BQK8 851 aa13.51□□□□□ -0.25
LRRC28-214ENST00000559433 ACBD6Q9BR61 282 aa13.51□□□□□ -0.25
LRRC28-214ENST00000559433 SLITRK6Q9H5Y7 841 aa13.51□□□□□ -0.25
LRRC28-214ENST00000559433 SLC2A4RGQ9NR83 387 aa13.51□□□□□ -0.25
LRRC28-214ENST00000559433 DMAC2Q9NW81 257 aa13.51□□□□□ -0.25
LRRC28-214ENST00000559433 ASB3Q9Y575 518 aa13.51□□□□□ -0.25
LRRC28-214ENST00000559433 PCDHB5Q9Y5E4 795 aa13.51□□□□□ -0.25
LRRC28-214ENST00000559433 DENND4CQ5VZ89 1909 aa13.51□□□□□ -0.25
LRRC28-214ENST00000559433 OBSL1O75147 1896 aa13.5□□□□□ -0.25
LRRC28-214ENST00000559433 CALUO43852 315 aaPredicted RBP13.5□□□□□ -0.25
LRRC28-214ENST00000559433 PHACTR2O75167 634 aa13.5□□□□□ -0.25
LRRC28-214ENST00000559433 MOSPD3O75425 235 aa13.5□□□□□ -0.25
LRRC28-214ENST00000559433 ECI2O75521 394 aa13.5□□□□□ -0.25
LRRC28-214ENST00000559433 CLSTN1O94985 981 aa13.5□□□□□ -0.25
LRRC28-214ENST00000559433 FGF19O95750 216 aa13.5□□□□□ -0.25
LRRC28-214ENST00000559433 HAPLN1P10915 354 aaPredicted RBP13.5□□□□□ -0.25
LRRC28-214ENST00000559433 ATF6P18850 670 aa13.5□□□□□ -0.25
LRRC28-214ENST00000559433 PCSK1P29120 753 aa13.5□□□□□ -0.25
LRRC28-214ENST00000559433 LHX1P48742 406 aa13.5□□□□□ -0.25
LRRC28-214ENST00000559433 GPC5P78333 572 aa13.5□□□□□ -0.25
LRRC28-214ENST00000559433 BIRC3Q13489 604 aa13.5□□□□□ -0.25
LRRC28-214ENST00000559433 TRPC3Q13507 836 aa13.5□□□□□ -0.25
LRRC28-214ENST00000559433 KCNB1Q14721 858 aa13.5□□□□□ -0.25
LRRC28-214ENST00000559433 TEAD2Q15562 447 aa13.5□□□□□ -0.25
LRRC28-214ENST00000559433 NFE2Q16621 373 aaPredicted RBP13.5□□□□□ -0.25
LRRC28-214ENST00000559433 INTS6LQ5JSJ4 861 aaKnown RBP13.5□□□□□ -0.25
LRRC28-214ENST00000559433 POTEHQ6S545 545 aa13.5□□□□□ -0.25
LRRC28-214ENST00000559433 DNAJB7Q7Z6W7 309 aaPredicted RBP13.5□□□□□ -0.25
LRRC28-214ENST00000559433 OSTM1Q86WC4 334 aa13.5□□□□□ -0.25
LRRC28-214ENST00000559433 TMC8Q8IU68 726 aa13.5□□□□□ -0.25
LRRC28-214ENST00000559433 SHKBP1Q8TBC3 707 aa13.5□□□□□ -0.25
LRRC28-214ENST00000559433 PLEKHO2Q8TD55 490 aa13.5□□□□□ -0.25
LRRC28-214ENST00000559433 ZNF516Q92618 1163 aa13.5□□□□□ -0.25
LRRC28-214ENST00000559433 PSMG2Q969U7 264 aa13.5□□□□□ -0.25
LRRC28-214ENST00000559433 MMS19Q96T76 1030 aa13.5□□□□□ -0.25
LRRC28-214ENST00000559433 PI4K2AQ9BTU6 479 aa13.5□□□□□ -0.25
LRRC28-214ENST00000559433 LRRC3Q9BY71 257 aa13.5□□□□□ -0.25
LRRC28-214ENST00000559433 GPR88Q9GZN0 384 aa13.5□□□□□ -0.25
LRRC28-214ENST00000559433 GZF1Q9H116 711 aaPredicted RBP13.5□□□□□ -0.25
LRRC28-214ENST00000559433 ZFP14Q9HCL3 533 aa13.5□□□□□ -0.25
LRRC28-214ENST00000559433 ZNF334Q9HCZ1 680 aaPredicted RBP13.5□□□□□ -0.25
LRRC28-214ENST00000559433 TMLHEQ9NVH6 421 aa13.5□□□□□ -0.25
LRRC28-214ENST00000559433 MAPK8IP1Q9UQF2 711 aa13.5□□□□□ -0.25
LRRC28-214ENST00000559433 PTPRDP23468 1912 aa13.5□□□□□ -0.25
LRRC28-214ENST00000559433 MIA3Q5JRA6 1907 aa13.5□□□□□ -0.25
LRRC28-214ENST00000559433 A0A1W2PRU2 124 aa13.49□□□□□ -0.25
LRRC28-214ENST00000559433 KRBA1A5PL33 1030 aa13.49□□□□□ -0.25
LRRC28-214ENST00000559433 LRRIQ3A6PVS8 624 aaPredicted RBP13.49□□□□□ -0.25
LRRC28-214ENST00000559433 GABRDO14764 452 aa13.49□□□□□ -0.25
LRRC28-214ENST00000559433 GALR2O43603 387 aaPredicted RBP13.49□□□□□ -0.25
LRRC28-214ENST00000559433 HCRTO43612 131 aa13.49□□□□□ -0.25
LRRC28-214ENST00000559433 CST3P01034 146 aaPredicted RBP13.49□□□□□ -0.25
LRRC28-214ENST00000559433 NPR3P17342 541 aa13.49□□□□□ -0.25
LRRC28-214ENST00000559433 FCARP24071 287 aa13.49□□□□□ -0.25
LRRC28-214ENST00000559433 TNNC1P63316 161 aa13.49□□□□□ -0.25
LRRC28-214ENST00000559433 FAM160A1Q05DH4 1040 aa13.49□□□□□ -0.25
LRRC28-214ENST00000559433 PNOCQ13519 176 aa13.49□□□□□ -0.25
LRRC28-214ENST00000559433 FAM78AQ5JUQ0 283 aa13.49□□□□□ -0.25
LRRC28-214ENST00000559433 CEP135Q66GS9 1140 aa13.49□□□□□ -0.25
LRRC28-214ENST00000559433 CWF19L1Q69YN2 538 aaKnown RBP13.49□□□□□ -0.25
LRRC28-214ENST00000559433 TANGO2Q6ICL3 276 aa13.49□□□□□ -0.25
LRRC28-214ENST00000559433 DPH6Q7L8W6 267 aa13.49□□□□□ -0.25
LRRC28-214ENST00000559433 ALYREFQ86V81 257 aaKnown RBP13.49□□□□□ -0.25
LRRC28-214ENST00000559433 TMEM105Q8N8V8 129 aa13.49□□□□□ -0.25
LRRC28-214ENST00000559433 PRSS33Q8NF86 280 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms