RNA–Protein interactions for RNA: ENST00000559175.1

CTDSPL2-206, Transcript of CTD small phosphatase like 2, humanhuman

TSL 2

Gene CTDSPL2, Length 3,609 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-206ENST00000559175 UTP14AQ9BVJ6 771 aaKnown RBP6.13□□□□□ -1.43
CTDSPL2-206ENST00000559175 CHRDQ9H2X0 955 aa6.13□□□□□ -1.43
CTDSPL2-206ENST00000559175 ATP13A1Q9HD20 1204 aa6.13□□□□□ -1.43
CTDSPL2-206ENST00000559175 SNTG1Q9NSN8 517 aa6.13□□□□□ -1.43
CTDSPL2-206ENST00000559175 HSPBP1Q9NZL4 362 aa6.13□□□□□ -1.43
CTDSPL2-206ENST00000559175 TBC1D14Q9P2M4 693 aa6.13□□□□□ -1.43
CTDSPL2-206ENST00000559175 MALT1Q9UDY8 824 aa6.13□□□□□ -1.43
CTDSPL2-206ENST00000559175 L1RE1Q9UN81 338 aa6.13□□□□□ -1.43
CTDSPL2-206ENST00000559175 SESN1Q9Y6P5 492 aa6.13□□□□□ -1.43
CTDSPL2-206ENST00000559175 TTC41PQ6P2S7 1318 aa6.13□□□□□ -1.43
CTDSPL2-206ENST00000559175 ZNF335Q9H4Z2 1342 aaPredicted RBP6.13□□□□□ -1.43
CTDSPL2-206ENST00000559175 COL15A1P39059 1388 aa6.13□□□□□ -1.43
CTDSPL2-206ENST00000559175 hCG_1809904A0A1W2PP81 198 aa6.13□□□□□ -1.43
CTDSPL2-206ENST00000559175 A0A1W2PPE2 198 aa6.13□□□□□ -1.43
CTDSPL2-206ENST00000559175 A0A1W2PR64 198 aa6.13□□□□□ -1.43
CTDSPL2-206ENST00000559175 CAPN8A6NHC0 703 aa6.13□□□□□ -1.43
CTDSPL2-206ENST00000559175 FAM177BA6PVY3 158 aa6.13□□□□□ -1.43
CTDSPL2-206ENST00000559175 FLOT1O75955 427 aa6.13□□□□□ -1.43
CTDSPL2-206ENST00000559175 TUBB4AP04350 444 aa6.13□□□□□ -1.43
CTDSPL2-206ENST00000559175 POTEJP0CG39 1038 aa6.13□□□□□ -1.43
CTDSPL2-206ENST00000559175 RARBP10826 455 aa6.13□□□□□ -1.43
CTDSPL2-206ENST00000559175 MCM3P25205 808 aa6.13□□□□□ -1.43
CTDSPL2-206ENST00000559175 CCT8P50990 548 aa6.13□□□□□ -1.43
CTDSPL2-206ENST00000559175 CCDC40Q4G0X9 1142 aa6.13□□□□□ -1.43
CTDSPL2-206ENST00000559175 HABP4Q5JVS0 413 aaKnown RBP6.13□□□□□ -1.43
CTDSPL2-206ENST00000559175 CYP4F22Q6NT55 531 aa6.13□□□□□ -1.43
CTDSPL2-206ENST00000559175 SLC2A7Q6PXP3 512 aa6.13□□□□□ -1.43
CTDSPL2-206ENST00000559175 INTS8Q75QN2 995 aaKnown RBP6.13□□□□□ -1.43
CTDSPL2-206ENST00000559175 CPLX4Q7Z7G2 160 aa6.13□□□□□ -1.43
CTDSPL2-206ENST00000559175 FBXO15Q8NCQ5 510 aaPredicted RBP6.13□□□□□ -1.43
CTDSPL2-206ENST00000559175 ATP2A3Q93084 1043 aa6.13□□□□□ -1.43
CTDSPL2-206ENST00000559175 GTF3C6Q969F1 213 aa6.13□□□□□ -1.43
CTDSPL2-206ENST00000559175 TUBGCP3Q96CW5 907 aa6.13□□□□□ -1.43
CTDSPL2-206ENST00000559175 CCDC43Q96MW1 224 aaKnown RBP6.13□□□□□ -1.43
CTDSPL2-206ENST00000559175 NR1H4Q96RI1 486 aaPredicted RBP6.13□□□□□ -1.43
CTDSPL2-206ENST00000559175 C19orf44Q9H6X5 657 aa6.13□□□□□ -1.43
CTDSPL2-206ENST00000559175 SYNDIG1Q9H7V2 258 aa6.13□□□□□ -1.43
CTDSPL2-206ENST00000559175 PRDM9Q9NQV7 894 aa6.13□□□□□ -1.43
CTDSPL2-206ENST00000559175 CCDC169A6NNP5 214 aa6.12□□□□□ -1.43
CTDSPL2-206ENST00000559175 H7C1W4 665 aa6.12□□□□□ -1.43
CTDSPL2-206ENST00000559175 EML1O00423 815 aa6.12□□□□□ -1.43
CTDSPL2-206ENST00000559175 TUSC2O75896 110 aa6.12□□□□□ -1.43
CTDSPL2-206ENST00000559175 NPTXRO95502 500 aa6.12□□□□□ -1.43
CTDSPL2-206ENST00000559175 KRT14P02533 472 aa6.12□□□□□ -1.43
CTDSPL2-206ENST00000559175 TROVE2P10155 538 aaKnown RBP eCLIP6.12□□□□□ -1.43
CTDSPL2-206ENST00000559175 TSHRP16473 764 aa6.12□□□□□ -1.43
CTDSPL2-206ENST00000559175 HTR1BP28222 390 aa6.12□□□□□ -1.43
CTDSPL2-206ENST00000559175 AFMP43652 599 aa6.12□□□□□ -1.43
CTDSPL2-206ENST00000559175 SUMO1P63165 101 aaKnown RBP6.12□□□□□ -1.43
CTDSPL2-206ENST00000559175 CBX3Q13185 183 aa6.12□□□□□ -1.43
CTDSPL2-206ENST00000559175 HABP2Q14520 560 aaPredicted RBP6.12□□□□□ -1.43
CTDSPL2-206ENST00000559175 MPEG1Q2M385 716 aa6.12□□□□□ -1.43
CTDSPL2-206ENST00000559175 GKAP1Q5VSY0 366 aaPredicted RBP6.12□□□□□ -1.43
CTDSPL2-206ENST00000559175 SLC30A9Q6PML9 568 aa6.12□□□□□ -1.43
CTDSPL2-206ENST00000559175 MPRIPQ6WCQ1 1025 aa6.12□□□□□ -1.43
CTDSPL2-206ENST00000559175 ADGRG6Q86SQ4 1221 aa6.12□□□□□ -1.43
CTDSPL2-206ENST00000559175 GALNT15Q8N3T1 639 aa6.12□□□□□ -1.43
CTDSPL2-206ENST00000559175 GPT2Q8TD30 523 aa6.12□□□□□ -1.43
CTDSPL2-206ENST00000559175 FOXJ1Q92949 421 aa6.12□□□□□ -1.43
CTDSPL2-206ENST00000559175 PTP4A1Q93096 173 aa6.12□□□□□ -1.43
CTDSPL2-206ENST00000559175 ZDHHC15Q96MV8 337 aa6.12□□□□□ -1.43
CTDSPL2-206ENST00000559175 GDAP1L1Q96MZ0 367 aa6.12□□□□□ -1.43
CTDSPL2-206ENST00000559175 JPH2Q9BR39 696 aaPredicted RBP6.12□□□□□ -1.43
CTDSPL2-206ENST00000559175 CD244Q9BZW8 370 aa6.12□□□□□ -1.43
CTDSPL2-206ENST00000559175 FKBP14Q9NWM8 211 aa6.12□□□□□ -1.43
CTDSPL2-206ENST00000559175 BABAM1Q9NWV8 329 aa6.12□□□□□ -1.43
CTDSPL2-206ENST00000559175 GPN3Q9UHW5 284 aaPredicted RBP6.12□□□□□ -1.43
CTDSPL2-206ENST00000559175 SLC13A4Q9UKG4 626 aa6.12□□□□□ -1.43
CTDSPL2-206ENST00000559175 ATP11BQ9Y2G3 1177 aa6.12□□□□□ -1.43
CTDSPL2-206ENST00000559175 PIAS3Q9Y6X2 628 aa6.12□□□□□ -1.43
CTDSPL2-206ENST00000559175 GAKO14976 1311 aa6.12□□□□□ -1.43
CTDSPL2-206ENST00000559175 ATP8B3O60423 1300 aa6.12□□□□□ -1.43
CTDSPL2-206ENST00000559175 UBAP1LF5GYI3 381 aa6.12□□□□□ -1.43
CTDSPL2-206ENST00000559175 MCF2LO15068 1137 aa6.12□□□□□ -1.43
CTDSPL2-206ENST00000559175 NPC1O15118 1278 aa6.12□□□□□ -1.43
CTDSPL2-206ENST00000559175 SEC24DO94855 1032 aaPredicted RBP6.12□□□□□ -1.43
CTDSPL2-206ENST00000559175 S100A6P06703 90 aa6.12□□□□□ -1.43
CTDSPL2-206ENST00000559175 DDX5P17844 614 aaKnown RBP6.12□□□□□ -1.43
CTDSPL2-206ENST00000559175 GNL1P36915 607 aaPredicted RBP6.12□□□□□ -1.43
CTDSPL2-206ENST00000559175 PPARGP37231 505 aaPredicted RBP6.12□□□□□ -1.43
CTDSPL2-206ENST00000559175 SEC24CP53992 1094 aa6.12□□□□□ -1.43
CTDSPL2-206ENST00000559175 ACY1Q03154 408 aa6.12□□□□□ -1.43
CTDSPL2-206ENST00000559175 MXD4Q14582 209 aaPredicted RBP6.12□□□□□ -1.43
CTDSPL2-206ENST00000559175 NCAPHQ15003 741 aa6.12□□□□□ -1.43
CTDSPL2-206ENST00000559175 C4orf48Q5BLP8 95 aa6.12□□□□□ -1.43
CTDSPL2-206ENST00000559175 PEAR1Q5VY43 1037 aaPredicted RBP6.12□□□□□ -1.43
CTDSPL2-206ENST00000559175 TAF2Q6P1X5 1199 aa6.12□□□□□ -1.43
CTDSPL2-206ENST00000559175 TAGAPQ8N103 731 aa6.12□□□□□ -1.43
CTDSPL2-206ENST00000559175 TRIM58Q8NG06 486 aa6.12□□□□□ -1.43
CTDSPL2-206ENST00000559175 CMTM3Q96MX0 182 aa6.12□□□□□ -1.43
CTDSPL2-206ENST00000559175 TREX2Q9BQ50 279 aaPredicted RBP6.12□□□□□ -1.43
CTDSPL2-206ENST00000559175 TUBA1CQ9BQE3 449 aa6.12□□□□□ -1.43
CTDSPL2-206ENST00000559175 CCDC106Q9BWC9 280 aa6.12□□□□□ -1.43
CTDSPL2-206ENST00000559175 VPS16Q9H269 839 aa6.12□□□□□ -1.43
CTDSPL2-206ENST00000559175 SEMA4AQ9H3S1 761 aa6.12□□□□□ -1.43
CTDSPL2-206ENST00000559175 OPA3Q9H6K4 179 aa6.12□□□□□ -1.43
CTDSPL2-206ENST00000559175 JMJD4Q9H9V9 463 aa6.12□□□□□ -1.43
CTDSPL2-206ENST00000559175 POLMQ9NP87 494 aaPredicted RBP6.12□□□□□ -1.43
CTDSPL2-206ENST00000559175 BMP2KQ9NSY1 1161 aaPredicted RBP6.12□□□□□ -1.43
CTDSPL2-206ENST00000559175 CCM2LQ9NUG4 571 aaPredicted RBP6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms