RNA–Protein interactions for RNA: ENST00000559108.1

TPM1-217, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-217ENST00000559108 GCNT4Q9P109 453 aa11.67□□□□□ -0.54
TPM1-217ENST00000559108 MTMR11A4FU01 709 aa11.66□□□□□ -0.54
TPM1-217ENST00000559108 LRRC10BA6NIK2 292 aa11.66□□□□□ -0.54
TPM1-217ENST00000559108 STX10O60499 249 aa11.66□□□□□ -0.54
TPM1-217ENST00000559108 HUS1O60921 280 aa11.66□□□□□ -0.54
TPM1-217ENST00000559108 RFPL2O75678 378 aa11.66□□□□□ -0.54
TPM1-217ENST00000559108 SOAT2O75908 522 aa11.66□□□□□ -0.54
TPM1-217ENST00000559108 ABLIM3O94929 683 aa11.66□□□□□ -0.54
TPM1-217ENST00000559108 PDGFRBP09619 1106 aa11.66□□□□□ -0.54
TPM1-217ENST00000559108 KLRC2P26717 231 aa11.66□□□□□ -0.54
TPM1-217ENST00000559108 CACNA2D1P54289 1103 aa11.66□□□□□ -0.54
TPM1-217ENST00000559108 TNNC1P63316 161 aa11.66□□□□□ -0.54
TPM1-217ENST00000559108 INCA1Q0VD86 236 aa11.66□□□□□ -0.54
TPM1-217ENST00000559108 CUL2Q13617 745 aa11.66□□□□□ -0.54
TPM1-217ENST00000559108 SYCE2Q6PIF2 218 aa11.66□□□□□ -0.54
TPM1-217ENST00000559108 RRAGAQ7L523 313 aa11.66□□□□□ -0.54
TPM1-217ENST00000559108 USP37Q86T82 979 aa11.66□□□□□ -0.54
TPM1-217ENST00000559108 FAM114A1Q8IWE2 563 aa11.66□□□□□ -0.54
TPM1-217ENST00000559108 C12orf76Q8N812 135 aaPredicted RBP11.66□□□□□ -0.54
TPM1-217ENST00000559108 STKLD1Q8NE28 680 aa11.66□□□□□ -0.54
TPM1-217ENST00000559108 MMS19Q96T76 1030 aa11.66□□□□□ -0.54
TPM1-217ENST00000559108 ZSWIM1Q9BR11 485 aa11.66□□□□□ -0.54
TPM1-217ENST00000559108 ELOVL4Q9GZR5 314 aa11.66□□□□□ -0.54
TPM1-217ENST00000559108 NAT10Q9H0A0 1025 aaKnown RBP11.66□□□□□ -0.54
TPM1-217ENST00000559108 RBSNQ9H1K0 784 aa11.66□□□□□ -0.54
TPM1-217ENST00000559108 FBXW11Q9UKB1 542 aa11.66□□□□□ -0.54
TPM1-217ENST00000559108 SIK3Q9Y2K2 1263 aa11.66□□□□□ -0.54
TPM1-217ENST00000559108 XIRP2A4UGR9 3374 aa11.66□□□□□ -0.54
TPM1-217ENST00000559108 DENND4CQ5VZ89 1909 aa11.66□□□□□ -0.54
TPM1-217ENST00000559108 MYH10P35580 1976 aa11.65□□□□□ -0.54
TPM1-217ENST00000559108 ZNF638Q14966 1978 aaKnown RBP11.65□□□□□ -0.54
TPM1-217ENST00000559108 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.65□□□□□ -0.54
TPM1-217ENST00000559108 LGALS16A8MUM7 142 aa11.65□□□□□ -0.54
TPM1-217ENST00000559108 RNF225M0QZC1 329 aaPredicted RBP11.65□□□□□ -0.54
TPM1-217ENST00000559108 P4HA2O15460 535 aa11.65□□□□□ -0.54
TPM1-217ENST00000559108 N4BP1O75113 896 aaKnown RBP11.65□□□□□ -0.54
TPM1-217ENST00000559108 CILPO75339 1184 aa11.65□□□□□ -0.54
TPM1-217ENST00000559108 NOL4O94818 638 aa11.65□□□□□ -0.54
TPM1-217ENST00000559108 PNMA6AP0CW24 399 aaPredicted RBP11.65□□□□□ -0.54
TPM1-217ENST00000559108 CD58P19256 250 aa11.65□□□□□ -0.54
TPM1-217ENST00000559108 PAX3P23760 479 aa11.65□□□□□ -0.54
TPM1-217ENST00000559108 NDST1P52848 882 aa11.65□□□□□ -0.54
TPM1-217ENST00000559108 TFF2Q03403 129 aa11.65□□□□□ -0.54
TPM1-217ENST00000559108 INTS6LQ5JSJ4 861 aaKnown RBP11.65□□□□□ -0.54
TPM1-217ENST00000559108 TMEM184AQ6ZMB5 413 aa11.65□□□□□ -0.54
TPM1-217ENST00000559108 PAQR9Q6ZVX9 377 aa11.65□□□□□ -0.54
TPM1-217ENST00000559108 DPH6Q7L8W6 267 aa11.65□□□□□ -0.54
TPM1-217ENST00000559108 TMEM86AQ8N2M4 240 aa11.65□□□□□ -0.54
TPM1-217ENST00000559108 ATAD1Q8NBU5 361 aa11.65□□□□□ -0.54
TPM1-217ENST00000559108 ZNF707Q96C28 371 aaPredicted RBP11.65□□□□□ -0.54
TPM1-217ENST00000559108 MSLNLQ96KJ4 702 aa11.65□□□□□ -0.54
TPM1-217ENST00000559108 SYT15Q9BQS2 421 aa11.65□□□□□ -0.54
TPM1-217ENST00000559108 APOL5Q9BWW9 433 aa11.65□□□□□ -0.54
TPM1-217ENST00000559108 EMILIN2Q9BXX0 1053 aa11.65□□□□□ -0.54
TPM1-217ENST00000559108 GPR88Q9GZN0 384 aa11.65□□□□□ -0.54
TPM1-217ENST00000559108 GANQ9H2C0 597 aa11.65□□□□□ -0.54
TPM1-217ENST00000559108 MAN1C1Q9NR34 630 aa11.65□□□□□ -0.54
TPM1-217ENST00000559108 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.65□□□□□ -0.54
TPM1-217ENST00000559108 CLDND1Q9NY35 253 aa11.65□□□□□ -0.54
TPM1-217ENST00000559108 MAGEC2Q9UBF1 373 aaPredicted RBP11.65□□□□□ -0.54
TPM1-217ENST00000559108 GTF3C4Q9UKN8 822 aa11.65□□□□□ -0.54
TPM1-217ENST00000559108 MYO16Q9Y6X6 1858 aa11.64□□□□□ -0.55
TPM1-217ENST00000559108 GTPBP10A4D1E9 387 aaKnown RBP11.64□□□□□ -0.55
TPM1-217ENST00000559108 BECN2A8MW95 431 aa11.64□□□□□ -0.55
TPM1-217ENST00000559108 H3BQ06 376 aaPredicted RBP11.64□□□□□ -0.55
TPM1-217ENST00000559108 H7C4K7 107 aa11.64□□□□□ -0.55
TPM1-217ENST00000559108 ADH1AP07327 375 aa11.64□□□□□ -0.55
TPM1-217ENST00000559108 CPB1P15086 417 aa11.64□□□□□ -0.55
TPM1-217ENST00000559108 GPR15P49685 360 aa11.64□□□□□ -0.55
TPM1-217ENST00000559108 RAD23BP54727 409 aa11.64□□□□□ -0.55
TPM1-217ENST00000559108 GPR17Q13304 367 aa11.64□□□□□ -0.55
TPM1-217ENST00000559108 CLUL1Q15846 466 aa11.64□□□□□ -0.55
TPM1-217ENST00000559108 SLC39A12Q504Y0 691 aa11.64□□□□□ -0.55
TPM1-217ENST00000559108 IQCEQ6IPM2 695 aa11.64□□□□□ -0.55
TPM1-217ENST00000559108 FAM171BQ6P995 826 aa11.64□□□□□ -0.55
TPM1-217ENST00000559108 ACOT1Q86TX2 421 aa11.64□□□□□ -0.55
TPM1-217ENST00000559108 C12orf29Q8N999 325 aa11.64□□□□□ -0.55
TPM1-217ENST00000559108 OR6B3Q8NGW1 331 aa11.64□□□□□ -0.55
TPM1-217ENST00000559108 MYLPFQ96A32 169 aa11.64□□□□□ -0.55
TPM1-217ENST00000559108 PABPC5Q96DU9 382 aaKnown RBP11.64□□□□□ -0.55
TPM1-217ENST00000559108 NT5C1BQ96P26 610 aa11.64□□□□□ -0.55
TPM1-217ENST00000559108 ACBD6Q9BR61 282 aa11.64□□□□□ -0.55
TPM1-217ENST00000559108 S1PR5Q9H228 398 aa11.64□□□□□ -0.55
TPM1-217ENST00000559108 ACP6Q9NPH0 428 aa11.64□□□□□ -0.55
TPM1-217ENST00000559108 CISHQ9NSE2 258 aa11.64□□□□□ -0.55
TPM1-217ENST00000559108 STK39Q9UEW8 545 aa11.64□□□□□ -0.55
TPM1-217ENST00000559108 DSEQ9UL01 958 aa11.64□□□□□ -0.55
TPM1-217ENST00000559108 SSX2IPQ9Y2D8 614 aa11.64□□□□□ -0.55
TPM1-217ENST00000559108 SLC27A5Q9Y2P5 690 aa11.64□□□□□ -0.55
TPM1-217ENST00000559108 FHOD1Q9Y613 1164 aa11.64□□□□□ -0.55
TPM1-217ENST00000559108 DOCK8Q8NF50 2099 aa11.63□□□□□ -0.55
TPM1-217ENST00000559108 ANAPC1Q9H1A4 1944 aa11.63□□□□□ -0.55
TPM1-217ENST00000559108 A0A1B0GTH6 734 aa11.63□□□□□ -0.55
TPM1-217ENST00000559108 GRXCR2A6NFK2 248 aa11.63□□□□□ -0.55
TPM1-217ENST00000559108 OR6C75A6NL08 312 aa11.63□□□□□ -0.55
TPM1-217ENST00000559108 SMTNL1A8MU46 457 aa11.63□□□□□ -0.55
TPM1-217ENST00000559108 A8MXQ7 604 aa11.63□□□□□ -0.55
TPM1-217ENST00000559108 CLDN5O00501 218 aa11.63□□□□□ -0.55
TPM1-217ENST00000559108 CLSTN1O94985 981 aa11.63□□□□□ -0.55
TPM1-217ENST00000559108 PAPLNO95428 1278 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms