RNA–Protein interactions for RNA: ENST00000558919.1

VPS13C-207, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

TSL 5

Gene VPS13C, Length 566 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-207ENST00000558919 CLK3P49761 638 aaKnown RBP4.68□□□□□ -1.66
VPS13C-207ENST00000558919 NDUFV1P49821 464 aa4.68□□□□□ -1.66
VPS13C-207ENST00000558919 TOB1P50616 345 aaPredicted RBP4.68□□□□□ -1.66
VPS13C-207ENST00000558919 AGFG1P52594 562 aaKnown RBP4.68□□□□□ -1.66
VPS13C-207ENST00000558919 SIM1P81133 766 aaPredicted RBP4.68□□□□□ -1.66
VPS13C-207ENST00000558919 GPSM2P81274 684 aa4.68□□□□□ -1.66
VPS13C-207ENST00000558919 AMOTQ4VCS5 1084 aa4.68□□□□□ -1.66
VPS13C-207ENST00000558919 STRIP1Q5VSL9 837 aa4.68□□□□□ -1.66
VPS13C-207ENST00000558919 PRIMA1Q86XR5 153 aa4.68□□□□□ -1.66
VPS13C-207ENST00000558919 DNAJC10Q8IXB1 793 aa4.68□□□□□ -1.66
VPS13C-207ENST00000558919 B3GALNT2Q8NCR0 500 aa4.68□□□□□ -1.66
VPS13C-207ENST00000558919 FAM46DQ8NEK8 389 aa4.68□□□□□ -1.66
VPS13C-207ENST00000558919 RUNDC1Q96C34 613 aa4.68□□□□□ -1.66
VPS13C-207ENST00000558919 FBXL20Q96IG2 436 aa4.68□□□□□ -1.66
VPS13C-207ENST00000558919 SMOC2Q9H3U7 446 aa4.68□□□□□ -1.66
VPS13C-207ENST00000558919 RIOX1Q9H6W3 641 aa4.68□□□□□ -1.66
VPS13C-207ENST00000558919 ARMT1Q9H993 441 aa4.68□□□□□ -1.66
VPS13C-207ENST00000558919 PIH1D1Q9NWS0 290 aaKnown RBP4.68□□□□□ -1.66
VPS13C-207ENST00000558919 HESX1Q9UBX0 185 aa4.68□□□□□ -1.66
VPS13C-207ENST00000558919 TCEAL9Q9UHQ7 104 aa4.68□□□□□ -1.66
VPS13C-207ENST00000558919 MED16Q9Y2X0 877 aa4.68□□□□□ -1.66
VPS13C-207ENST00000558919 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.68□□□□□ -1.66
VPS13C-207ENST00000558919 PLEKHM1Q9Y4G2 1056 aa4.68□□□□□ -1.66
VPS13C-207ENST00000558919 INSL6Q9Y581 213 aa4.68□□□□□ -1.66
VPS13C-207ENST00000558919 COL11A2P13942 1736 aaPredicted RBP4.68□□□□□ -1.66
VPS13C-207ENST00000558919 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.67□□□□□ -1.66
VPS13C-207ENST00000558919 ERC2O15083 957 aa4.67□□□□□ -1.66
VPS13C-207ENST00000558919 ORC4O43929 436 aa4.67□□□□□ -1.66
VPS13C-207ENST00000558919 VPS4BO75351 444 aa4.67□□□□□ -1.66
VPS13C-207ENST00000558919 THP07101 528 aa4.67□□□□□ -1.66
VPS13C-207ENST00000558919 GCLCP48506 637 aaPredicted RBP4.67□□□□□ -1.66
VPS13C-207ENST00000558919 KCNJ5P48544 419 aa4.67□□□□□ -1.66
VPS13C-207ENST00000558919 HNRNPMP52272 730 aaKnown RBP eCLIP4.67□□□□□ -1.66
VPS13C-207ENST00000558919 NANOS3P60323 173 aaKnown RBP4.67□□□□□ -1.66
VPS13C-207ENST00000558919 ANO6Q4KMQ2 910 aa4.67□□□□□ -1.66
VPS13C-207ENST00000558919 KAZNQ674X7 775 aa4.67□□□□□ -1.66
VPS13C-207ENST00000558919 FAM109AQ8N4B1 249 aa4.67□□□□□ -1.66
VPS13C-207ENST00000558919 MAGEB6Q8N7X4 407 aa4.67□□□□□ -1.66
VPS13C-207ENST00000558919 ZBTB34Q8NCN2 500 aa4.67□□□□□ -1.66
VPS13C-207ENST00000558919 TOR1AIP2Q8NFQ8 470 aa4.67□□□□□ -1.66
VPS13C-207ENST00000558919 PPP1R35Q8TAP8 253 aa4.67□□□□□ -1.66
VPS13C-207ENST00000558919 MYCBPAPQ8TBZ2 947 aa4.67□□□□□ -1.66
VPS13C-207ENST00000558919 MRGPRX1Q96LB2 322 aa4.67□□□□□ -1.66
VPS13C-207ENST00000558919 NELL2Q99435 816 aa4.67□□□□□ -1.66
VPS13C-207ENST00000558919 DUSP26Q9BV47 211 aa4.67□□□□□ -1.66
VPS13C-207ENST00000558919 AMBRA1Q9C0C7 1298 aa4.67□□□□□ -1.66
VPS13C-207ENST00000558919 TLK1Q9UKI8 766 aa4.67□□□□□ -1.66
VPS13C-207ENST00000558919 NOB1Q9ULX3 412 aaKnown RBP4.67□□□□□ -1.66
VPS13C-207ENST00000558919 WDR27A2RRH5 827 aa4.66□□□□□ -1.66
VPS13C-207ENST00000558919 PRPF3O43395 683 aaKnown RBP4.66□□□□□ -1.66
VPS13C-207ENST00000558919 PPFIA2O75334 1257 aa4.66□□□□□ -1.66
VPS13C-207ENST00000558919 CHRM3P20309 590 aa4.66□□□□□ -1.66
VPS13C-207ENST00000558919 CACNA2D1P54289 1103 aa4.66□□□□□ -1.66
VPS13C-207ENST00000558919 LRRC41Q15345 812 aa4.66□□□□□ -1.66
VPS13C-207ENST00000558919 LONRF3Q496Y0 759 aa4.66□□□□□ -1.66
VPS13C-207ENST00000558919 SFRP4Q6FHJ7 346 aaPredicted RBP4.66□□□□□ -1.66
VPS13C-207ENST00000558919 NPNTQ6UXI9 565 aa4.66□□□□□ -1.66
VPS13C-207ENST00000558919 TSHZ1Q6ZSZ6 1077 aa4.66□□□□□ -1.66
VPS13C-207ENST00000558919 OVCH2Q7RTZ1 564 aa4.66□□□□□ -1.66
VPS13C-207ENST00000558919 FBXO41Q8TF61 875 aa4.66□□□□□ -1.66
VPS13C-207ENST00000558919 MOGAT1Q96PD6 335 aa4.66□□□□□ -1.66
VPS13C-207ENST00000558919 PUS7Q96PZ0 661 aaKnown RBP4.66□□□□□ -1.66
VPS13C-207ENST00000558919 CRAMP1Q96RY5 1269 aa4.66□□□□□ -1.66
VPS13C-207ENST00000558919 SPATA5L1Q9BVQ7 753 aa4.66□□□□□ -1.66
VPS13C-207ENST00000558919 TMEM60Q9H2L4 133 aa4.66□□□□□ -1.66
VPS13C-207ENST00000558919 C1orf112Q9NSG2 853 aa4.66□□□□□ -1.66
VPS13C-207ENST00000558919 KLC4Q9NSK0 619 aa4.66□□□□□ -1.66
VPS13C-207ENST00000558919 CPA4Q9UI42 421 aa4.66□□□□□ -1.66
VPS13C-207ENST00000558919 TSPAN6O43657 245 aa4.65□□□□□ -1.67
VPS13C-207ENST00000558919 UNC5CO95185 931 aa4.65□□□□□ -1.67
VPS13C-207ENST00000558919 GRPP07492 148 aa4.65□□□□□ -1.67
VPS13C-207ENST00000558919 ATXN1LP0C7T5 689 aaKnown RBP4.65□□□□□ -1.67
VPS13C-207ENST00000558919 CD6P30203 668 aa4.65□□□□□ -1.67
VPS13C-207ENST00000558919 VIPR2P41587 438 aa4.65□□□□□ -1.67
VPS13C-207ENST00000558919 GRIA3P42263 894 aa4.65□□□□□ -1.67
VPS13C-207ENST00000558919 MAPK10P53779 464 aa4.65□□□□□ -1.67
VPS13C-207ENST00000558919 LOXL3P58215 753 aa4.65□□□□□ -1.67
VPS13C-207ENST00000558919 BOP1Q14137 746 aaKnown RBP4.65□□□□□ -1.67
VPS13C-207ENST00000558919 MLC1Q15049 377 aa4.65□□□□□ -1.67
VPS13C-207ENST00000558919 IQCB1Q15051 598 aa4.65□□□□□ -1.67
VPS13C-207ENST00000558919 TXNRD1Q16881 649 aa4.65□□□□□ -1.67
VPS13C-207ENST00000558919 RBM20Q5T481 1227 aaKnown RBP4.65□□□□□ -1.67
VPS13C-207ENST00000558919 CELF5Q8N6W0 485 aaKnown RBP4.65□□□□□ -1.67
VPS13C-207ENST00000558919 PCSK9Q8NBP7 692 aaKnown RBP4.65□□□□□ -1.67
VPS13C-207ENST00000558919 KBTBD7Q8WVZ9 684 aa4.65□□□□□ -1.67
VPS13C-207ENST00000558919 TFAP2BQ92481 460 aa4.65□□□□□ -1.67
VPS13C-207ENST00000558919 FAM136AQ96C01 138 aa4.65□□□□□ -1.67
VPS13C-207ENST00000558919 SLC46A1Q96NT5 459 aa4.65□□□□□ -1.67
VPS13C-207ENST00000558919 ALG8Q9BVK2 526 aa4.65□□□□□ -1.67
VPS13C-207ENST00000558919 TPSD1Q9BZJ3 242 aa4.65□□□□□ -1.67
VPS13C-207ENST00000558919 SLC17A6Q9P2U8 582 aa4.65□□□□□ -1.67
VPS13C-207ENST00000558919 STAP2Q9UGK3 403 aa4.65□□□□□ -1.67
VPS13C-207ENST00000558919 G3BP2Q9UN86 482 aaKnown RBP4.65□□□□□ -1.67
VPS13C-207ENST00000558919 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.65□□□□□ -1.67
VPS13C-207ENST00000558919 ADGRA2Q96PE1 1338 aa4.65□□□□□ -1.67
VPS13C-207ENST00000558919 A0A1W2PPL8 197 aa4.64□□□□□ -1.67
VPS13C-207ENST00000558919 ADM5C9JUS6 153 aa4.64□□□□□ -1.67
VPS13C-207ENST00000558919 FAM227AF5H4B4 570 aa4.64□□□□□ -1.67
VPS13C-207ENST00000558919 OVOL3O00110 214 aa4.64□□□□□ -1.67
VPS13C-207ENST00000558919 DCLK1O15075 740 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms