RNA–Protein interactions for RNA: ENST00000558861.1

LRRC28-209, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-209ENST00000558861 TMOD2Q9NZR1 351 aa7.04□□□□□ -1.28
LRRC28-209ENST00000558861 ZNF180Q9UJW8 692 aa7.04□□□□□ -1.28
LRRC28-209ENST00000558861 CDY2AQ9Y6F7 541 aa7.04□□□□□ -1.28
LRRC28-209ENST00000558861 CYP2D7A0A087X1C5 515 aa7.03□□□□□ -1.28
LRRC28-209ENST00000558861 A0A0A6YYK5 440 aaPredicted RBP7.03□□□□□ -1.28
LRRC28-209ENST00000558861 A0A0G2JNJ9 132 aa7.03□□□□□ -1.28
LRRC28-209ENST00000558861 HIP1O00291 1037 aa7.03□□□□□ -1.28
LRRC28-209ENST00000558861 TSPAN6O43657 245 aa7.03□□□□□ -1.28
LRRC28-209ENST00000558861 HSPA6P17066 643 aa7.03□□□□□ -1.28
LRRC28-209ENST00000558861 GNAT2P19087 354 aa7.03□□□□□ -1.28
LRRC28-209ENST00000558861 SHMT1P34896 483 aa7.03□□□□□ -1.28
LRRC28-209ENST00000558861 RECQLP46063 649 aaPredicted RBP7.03□□□□□ -1.28
LRRC28-209ENST00000558861 STAT5BP51692 787 aa7.03□□□□□ -1.28
LRRC28-209ENST00000558861 KCNQ1P51787 676 aa7.03□□□□□ -1.28
LRRC28-209ENST00000558861 CDK17Q00537 523 aa7.03□□□□□ -1.28
LRRC28-209ENST00000558861 PTH1RQ03431 593 aa7.03□□□□□ -1.28
LRRC28-209ENST00000558861 TOP3AQ13472 1001 aaPredicted RBP7.03□□□□□ -1.28
LRRC28-209ENST00000558861 SHROOM1Q2M3G4 852 aaPredicted RBP7.03□□□□□ -1.28
LRRC28-209ENST00000558861 SUPT20HL1Q3ZLR7 823 aa7.03□□□□□ -1.28
LRRC28-209ENST00000558861 C12orf60Q5U649 245 aa7.03□□□□□ -1.28
LRRC28-209ENST00000558861 CWC27Q6UX04 472 aaKnown RBP7.03□□□□□ -1.28
LRRC28-209ENST00000558861 GAREM2Q75VX8 874 aa7.03□□□□□ -1.28
LRRC28-209ENST00000558861 HIST1H2AHQ96KK5 128 aa7.03□□□□□ -1.28
LRRC28-209ENST00000558861 HIST1H2AJQ99878 128 aa7.03□□□□□ -1.28
LRRC28-209ENST00000558861 FDXACB1Q9BRP7 624 aaPredicted RBP7.03□□□□□ -1.28
LRRC28-209ENST00000558861 SOX7Q9BT81 388 aa7.03□□□□□ -1.28
LRRC28-209ENST00000558861 KRTAP4-8Q9BYQ9 185 aa7.03□□□□□ -1.28
LRRC28-209ENST00000558861 LSG1Q9H089 658 aaKnown RBP7.03□□□□□ -1.28
LRRC28-209ENST00000558861 DHX36Q9H2U1 1008 aaKnown RBP7.03□□□□□ -1.28
LRRC28-209ENST00000558861 POLR3BQ9NW08 1133 aaPredicted RBP7.03□□□□□ -1.28
LRRC28-209ENST00000558861 PI4KBQ9UBF8 816 aa7.03□□□□□ -1.28
LRRC28-209ENST00000558861 Q9UFV3 132 aa7.03□□□□□ -1.28
LRRC28-209ENST00000558861 SAP30BPQ9UHR5 308 aaKnown RBP7.03□□□□□ -1.28
LRRC28-209ENST00000558861 DNAI1Q9UI46 699 aa7.03□□□□□ -1.28
LRRC28-209ENST00000558861 ANAPC4Q9UJX5 808 aa7.03□□□□□ -1.28
LRRC28-209ENST00000558861 FBXO10Q9UK96 956 aa7.03□□□□□ -1.28
LRRC28-209ENST00000558861 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.03□□□□□ -1.28
LRRC28-209ENST00000558861 SLC4A4Q9Y6R1 1079 aa7.03□□□□□ -1.28
LRRC28-209ENST00000558861 TRPM7Q96QT4 1865 aa7.02□□□□□ -1.28
LRRC28-209ENST00000558861 E2F8A0AVK6 867 aa7.02□□□□□ -1.29
LRRC28-209ENST00000558861 SH3D21A4FU49 640 aa7.02□□□□□ -1.29
LRRC28-209ENST00000558861 CUTAO60888 179 aa7.02□□□□□ -1.29
LRRC28-209ENST00000558861 ZRANB2O95218 330 aaKnown RBP eCLIP7.02□□□□□ -1.29
LRRC28-209ENST00000558861 FGAP02671 866 aa7.02□□□□□ -1.29
LRRC28-209ENST00000558861 MTHFD2P13995 350 aa7.02□□□□□ -1.29
LRRC28-209ENST00000558861 C5AR1P21730 350 aa7.02□□□□□ -1.29
LRRC28-209ENST00000558861 GUCY1A2P33402 732 aa7.02□□□□□ -1.29
LRRC28-209ENST00000558861 ETV4P43268 484 aa7.02□□□□□ -1.29
LRRC28-209ENST00000558861 RAP1GAPP47736 663 aa7.02□□□□□ -1.29
LRRC28-209ENST00000558861 AFF3P51826 1226 aaKnown RBP7.02□□□□□ -1.29
LRRC28-209ENST00000558861 ZNF124Q15973 351 aa7.02□□□□□ -1.29
LRRC28-209ENST00000558861 VMACQ2NL98 169 aa7.02□□□□□ -1.29
LRRC28-209ENST00000558861 ZNF385BQ569K4 471 aa7.02□□□□□ -1.29
LRRC28-209ENST00000558861 TMEM240Q5SV17 173 aa7.02□□□□□ -1.29
LRRC28-209ENST00000558861 TATDN1Q6P1N9 297 aa7.02□□□□□ -1.29
LRRC28-209ENST00000558861 MIGA2Q7L4E1 593 aa7.02□□□□□ -1.29
LRRC28-209ENST00000558861 FOXP4Q8IVH2 680 aaPredicted RBP7.02□□□□□ -1.29
LRRC28-209ENST00000558861 CMTR2Q8IYT2 770 aaKnown RBP7.02□□□□□ -1.29
LRRC28-209ENST00000558861 CPA6Q8N4T0 437 aa7.02□□□□□ -1.29
LRRC28-209ENST00000558861 DNAJC5GQ8N7S2 189 aa7.02□□□□□ -1.29
LRRC28-209ENST00000558861 SLC44A5Q8NCS7 719 aa7.02□□□□□ -1.29
LRRC28-209ENST00000558861 RSAD2Q8WXG1 361 aa7.02□□□□□ -1.29
LRRC28-209ENST00000558861 CLMNQ96JQ2 1002 aa7.02□□□□□ -1.29
LRRC28-209ENST00000558861 IFT122Q9HBG6 1241 aa7.02□□□□□ -1.29
LRRC28-209ENST00000558861 DIAPH3Q9NSV4 1193 aa7.02□□□□□ -1.29
LRRC28-209ENST00000558861 MCM9Q9NXL9 1143 aa7.02□□□□□ -1.29
LRRC28-209ENST00000558861 HERC5Q9UII4 1024 aaKnown RBP7.02□□□□□ -1.29
LRRC28-209ENST00000558861 OTOFQ9HC10 1997 aa7.02□□□□□ -1.29
LRRC28-209ENST00000558861 NAV1Q8NEY1 1877 aa7.01□□□□□ -1.29
LRRC28-209ENST00000558861 UBE2Q2LH0YL09 131 aa7.01□□□□□ -1.29
LRRC28-209ENST00000558861 MAFGO15525 162 aa7.01□□□□□ -1.29
LRRC28-209ENST00000558861 HMGCRP04035 888 aa7.01□□□□□ -1.29
LRRC28-209ENST00000558861 PF4V1P10720 104 aa7.01□□□□□ -1.29
LRRC28-209ENST00000558861 ZSCAN20P17040 1043 aaPredicted RBP7.01□□□□□ -1.29
LRRC28-209ENST00000558861 SARSP49591 514 aaKnown RBP7.01□□□□□ -1.29
LRRC28-209ENST00000558861 SLC5A3P53794 718 aa7.01□□□□□ -1.29
LRRC28-209ENST00000558861 CAP1Q01518 475 aa7.01□□□□□ -1.29
LRRC28-209ENST00000558861 VGLL4Q14135 290 aa7.01□□□□□ -1.29
LRRC28-209ENST00000558861 EIF4HQ15056 248 aaKnown RBP7.01□□□□□ -1.29
LRRC28-209ENST00000558861 MBNL2Q5VZF2 373 aaKnown RBP7.01□□□□□ -1.29
LRRC28-209ENST00000558861 MCTP2Q6DN12 878 aa7.01□□□□□ -1.29
LRRC28-209ENST00000558861 CARFQ8N187 725 aa7.01□□□□□ -1.29
LRRC28-209ENST00000558861 BHLHE22Q8NFJ8 381 aaPredicted RBP7.01□□□□□ -1.29
LRRC28-209ENST00000558861 JPH3Q8WXH2 748 aaPredicted RBP7.01□□□□□ -1.29
LRRC28-209ENST00000558861 MAP4K1Q92918 833 aa7.01□□□□□ -1.29
LRRC28-209ENST00000558861 DYNLL2Q96FJ2 89 aa7.01□□□□□ -1.29
LRRC28-209ENST00000558861 ZNF341Q9BYN7 854 aa7.01□□□□□ -1.29
LRRC28-209ENST00000558861 SAE1Q9UBE0 346 aaPredicted RBP7.01□□□□□ -1.29
LRRC28-209ENST00000558861 ARPP21Q9UBL0 812 aaPredicted RBP7.01□□□□□ -1.29
LRRC28-209ENST00000558861 SERPINB13Q9UIV8 391 aa7.01□□□□□ -1.29
LRRC28-209ENST00000558861 TUBD1Q9UJT1 453 aa7.01□□□□□ -1.29
LRRC28-209ENST00000558861 AK9Q5TCS8 1911 aa7.01□□□□□ -1.29
LRRC28-209ENST00000558861 BAZ2AQ9UIF9 1905 aaKnown RBP7.01□□□□□ -1.29
LRRC28-209ENST00000558861 MYH1P12882 1939 aa7□□□□□ -1.29
LRRC28-209ENST00000558861 IGKV6D-41A0A0C4DH26 115 aa7□□□□□ -1.29
LRRC28-209ENST00000558861 SEC24DO94855 1032 aaPredicted RBP7□□□□□ -1.29
LRRC28-209ENST00000558861 NOVP48745 357 aa7□□□□□ -1.29
LRRC28-209ENST00000558861 GPR15P49685 360 aa7□□□□□ -1.29
LRRC28-209ENST00000558861 HUNKP57058 714 aa7□□□□□ -1.29
LRRC28-209ENST00000558861 SLC4A8Q2Y0W8 1093 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms