RNA–Protein interactions for RNA: ENST00000558763.1

SMAD3-207, Transcript of SMAD family member 3, humanhuman

TSL 2

Gene SMAD3, Length 1,957 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-207ENST00000558763 VCPIP1Q96JH7 1222 aa13.77□□□□□ -0.21
SMAD3-207ENST00000558763 C11orf70Q9BRQ4 267 aa13.77□□□□□ -0.21
SMAD3-207ENST00000558763 ELOVL4Q9GZR5 314 aa13.77□□□□□ -0.21
SMAD3-207ENST00000558763 TMEM39AQ9NV64 488 aa13.77□□□□□ -0.21
SMAD3-207ENST00000558763 TUBGCP4Q9UGJ1 667 aa13.77□□□□□ -0.21
SMAD3-207ENST00000558763 AGAP1Q9UPQ3 857 aa13.77□□□□□ -0.21
SMAD3-207ENST00000558763 DERAQ9Y315 318 aa13.77□□□□□ -0.21
SMAD3-207ENST00000558763 PITPNM1O00562 1244 aa13.76□□□□□ -0.21
SMAD3-207ENST00000558763 ZMYND10O75800 440 aa13.76□□□□□ -0.21
SMAD3-207ENST00000558763 LSM8O95777 96 aaKnown RBP13.76□□□□□ -0.21
SMAD3-207ENST00000558763 TUBBP07437 444 aa13.76□□□□□ -0.21
SMAD3-207ENST00000558763 CYP2C18P33260 490 aa13.76□□□□□ -0.21
SMAD3-207ENST00000558763 CTNNA1P35221 906 aaKnown RBP13.76□□□□□ -0.21
SMAD3-207ENST00000558763 C1QBPQ07021 282 aaKnown RBP13.76□□□□□ -0.21
SMAD3-207ENST00000558763 PAK2Q13177 524 aa13.76□□□□□ -0.21
SMAD3-207ENST00000558763 LONRF2Q1L5Z9 754 aa13.76□□□□□ -0.21
SMAD3-207ENST00000558763 MMS22LQ6ZRQ5 1243 aa13.76□□□□□ -0.21
SMAD3-207ENST00000558763 C1orf131Q8NDD1 294 aaKnown RBP13.76□□□□□ -0.21
SMAD3-207ENST00000558763 TRIM11Q96F44 468 aa13.76□□□□□ -0.21
SMAD3-207ENST00000558763 SCLYQ96I15 445 aa13.76□□□□□ -0.21
SMAD3-207ENST00000558763 FUT8Q9BYC5 575 aa13.76□□□□□ -0.21
SMAD3-207ENST00000558763 WNT8AQ9H1J5 351 aa13.76□□□□□ -0.21
SMAD3-207ENST00000558763 RNF39Q9H2S5 420 aa13.76□□□□□ -0.21
SMAD3-207ENST00000558763 TBX21Q9UL17 535 aa13.76□□□□□ -0.21
SMAD3-207ENST00000558763 ST3GAL5Q9UNP4 418 aa13.76□□□□□ -0.21
SMAD3-207ENST00000558763 TMEM110-MUSTN1A8MSY1 372 aa13.76□□□□□ -0.21
SMAD3-207ENST00000558763 MIF4GDA9UHW6 222 aaKnown RBP13.76□□□□□ -0.21
SMAD3-207ENST00000558763 PAEPP09466 180 aa13.76□□□□□ -0.21
SMAD3-207ENST00000558763 RBP5P82980 135 aa13.76□□□□□ -0.21
SMAD3-207ENST00000558763 MAMLD1Q13495 774 aa13.76□□□□□ -0.21
SMAD3-207ENST00000558763 PHLDB2Q86SQ0 1253 aa13.76□□□□□ -0.21
SMAD3-207ENST00000558763 SMG8Q8ND04 991 aaKnown RBP13.76□□□□□ -0.21
SMAD3-207ENST00000558763 C18orf25Q96B23 403 aaPredicted RBP13.76□□□□□ -0.21
SMAD3-207ENST00000558763 RNPC3Q96LT9 517 aaKnown RBP13.76□□□□□ -0.21
SMAD3-207ENST00000558763 CYP3A43Q9HB55 503 aa13.76□□□□□ -0.21
SMAD3-207ENST00000558763 ARFGAP3Q9NP61 516 aa13.76□□□□□ -0.21
SMAD3-207ENST00000558763 ADAM22Q9P0K1 906 aa13.76□□□□□ -0.21
SMAD3-207ENST00000558763 CYTH4Q9UIA0 394 aa13.76□□□□□ -0.21
SMAD3-207ENST00000558763 ANAPC7Q9UJX3 599 aa13.76□□□□□ -0.21
SMAD3-207ENST00000558763 PADI3Q9ULW8 664 aa13.76□□□□□ -0.21
SMAD3-207ENST00000558763 L1RE1Q9UN81 338 aa13.76□□□□□ -0.21
SMAD3-207ENST00000558763 NR2E1Q9Y466 385 aa13.76□□□□□ -0.21
SMAD3-207ENST00000558763 ALPK3Q96L96 1907 aa13.76□□□□□ -0.21
SMAD3-207ENST00000558763 BHMG1C9JSJ3 638 aaPredicted RBP13.75□□□□□ -0.21
SMAD3-207ENST00000558763 ITGA4P13612 1032 aa13.75□□□□□ -0.21
SMAD3-207ENST00000558763 AKAP5P24588 427 aa13.75□□□□□ -0.21
SMAD3-207ENST00000558763 CTNNA2P26232 953 aa13.75□□□□□ -0.21
SMAD3-207ENST00000558763 YWHAEP62258 255 aaKnown RBP13.75□□□□□ -0.21
SMAD3-207ENST00000558763 SLC7A5Q01650 507 aa13.75□□□□□ -0.21
SMAD3-207ENST00000558763 ORC1Q13415 861 aa13.75□□□□□ -0.21
SMAD3-207ENST00000558763 GLRA4Q5JXX5 417 aa13.75□□□□□ -0.21
SMAD3-207ENST00000558763 AADACL2Q6P093 401 aa13.75□□□□□ -0.21
SMAD3-207ENST00000558763 RNF19AQ9NV58 838 aa13.75□□□□□ -0.21
SMAD3-207ENST00000558763 NME7Q9Y5B8 376 aa13.75□□□□□ -0.21
SMAD3-207ENST00000558763 SCN5AQ14524 2016 aa13.75□□□□□ -0.21
SMAD3-207ENST00000558763 MAP2K7O14733 419 aa13.74□□□□□ -0.21
SMAD3-207ENST00000558763 GPR182O15218 404 aa13.74□□□□□ -0.21
SMAD3-207ENST00000558763 GJB6O95452 261 aa13.74□□□□□ -0.21
SMAD3-207ENST00000558763 ZNF211Q13398 564 aaPredicted RBP13.74□□□□□ -0.21
SMAD3-207ENST00000558763 GLE1Q53GS7 698 aaKnown RBP13.74□□□□□ -0.21
SMAD3-207ENST00000558763 DENND1BQ6P3S1 775 aa13.74□□□□□ -0.21
SMAD3-207ENST00000558763 APBB1IPQ7Z5R6 666 aaPredicted RBP13.74□□□□□ -0.21
SMAD3-207ENST00000558763 ZDHHC14Q8IZN3 488 aa13.74□□□□□ -0.21
SMAD3-207ENST00000558763 RUBCNQ92622 972 aa13.74□□□□□ -0.21
SMAD3-207ENST00000558763 KRT12Q99456 494 aa13.74□□□□□ -0.21
SMAD3-207ENST00000558763 SELENOOQ9BVL4 669 aa13.74□□□□□ -0.21
SMAD3-207ENST00000558763 AP1M1Q9BXS5 423 aa13.74□□□□□ -0.21
SMAD3-207ENST00000558763 ERVK-5Q9HDB9 667 aa13.74□□□□□ -0.21
SMAD3-207ENST00000558763 STIM2Q9P246 746 aa13.74□□□□□ -0.21
SMAD3-207ENST00000558763 IPPQ9Y573 584 aa13.74□□□□□ -0.21
SMAD3-207ENST00000558763 PCDHA3Q9Y5H8 950 aa13.74□□□□□ -0.21
SMAD3-207ENST00000558763 ZSCAN5CA6NGD5 496 aaPredicted RBP13.74□□□□□ -0.21
SMAD3-207ENST00000558763 NBNO60934 754 aa13.74□□□□□ -0.21
SMAD3-207ENST00000558763 FGGP02679 453 aa13.74□□□□□ -0.21
SMAD3-207ENST00000558763 GLI1P08151 1106 aa13.74□□□□□ -0.21
SMAD3-207ENST00000558763 PPP1R15BQ5SWA1 713 aa13.74□□□□□ -0.21
SMAD3-207ENST00000558763 TWF2Q6IBS0 349 aaKnown RBP13.74□□□□□ -0.21
SMAD3-207ENST00000558763 PPP1R2P3Q6NXS1 205 aa13.74□□□□□ -0.21
SMAD3-207ENST00000558763 C8orf74Q6P047 294 aa13.74□□□□□ -0.21
SMAD3-207ENST00000558763 GSPT2Q8IYD1 628 aaKnown RBP13.74□□□□□ -0.21
SMAD3-207ENST00000558763 TNS4Q8IZW8 715 aa13.74□□□□□ -0.21
SMAD3-207ENST00000558763 UBE2Q2Q8WVN8 375 aa13.74□□□□□ -0.21
SMAD3-207ENST00000558763 HINFPQ9BQA5 517 aa13.74□□□□□ -0.21
SMAD3-207ENST00000558763 ZNF518BQ9C0D4 1074 aa13.74□□□□□ -0.21
SMAD3-207ENST00000558763 LHX5Q9H2C1 402 aa13.74□□□□□ -0.21
SMAD3-207ENST00000558763 FAM124BQ9H5Z6 455 aaPredicted RBP13.74□□□□□ -0.21
SMAD3-207ENST00000558763 SMIM28A0A1B0GU29 152 aa13.73□□□□□ -0.21
SMAD3-207ENST00000558763 TRIM43BA6NCK2 446 aa13.73□□□□□ -0.21
SMAD3-207ENST00000558763 RAD51CO43502 376 aa13.73□□□□□ -0.21
SMAD3-207ENST00000558763 KCNE1P15382 129 aa13.73□□□□□ -0.21
SMAD3-207ENST00000558763 CYP3A5P20815 502 aa13.73□□□□□ -0.21
SMAD3-207ENST00000558763 IBSPP21815 317 aaPredicted RBP13.73□□□□□ -0.21
SMAD3-207ENST00000558763 ITGB8P26012 769 aa13.73□□□□□ -0.21
SMAD3-207ENST00000558763 TNFRSF8P28908 595 aa13.73□□□□□ -0.21
SMAD3-207ENST00000558763 SOX4Q06945 474 aaPredicted RBP13.73□□□□□ -0.21
SMAD3-207ENST00000558763 ZNF252P-AS1Q0IIN9 211 aa13.73□□□□□ -0.21
SMAD3-207ENST00000558763 GPNMBQ14956 572 aa13.73□□□□□ -0.21
SMAD3-207ENST00000558763 PTPN20Q4JDL3 420 aa13.73□□□□□ -0.21
SMAD3-207ENST00000558763 DAB2IPQ5VWQ8 1189 aa13.73□□□□□ -0.21
SMAD3-207ENST00000558763 C9orf57Q5W0N0 161 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms