RNA–Protein interactions for RNA: ENST00000558609.1

CSHL1-208, Transcript of chorionic somatomammotropin hormone like 1, humanhuman

TSL 3

Gene CSHL1, Length 1,081 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSHL1-208ENST00000558609 A0A1W2PQD8 194 aa16.66■□□□□ 0.26
CSHL1-208ENST00000558609 STK25O00506 426 aa16.66■□□□□ 0.26
CSHL1-208ENST00000558609 SOAT2O75908 522 aa16.66■□□□□ 0.26
CSHL1-208ENST00000558609 HAPLN1P10915 354 aaPredicted RBP16.66■□□□□ 0.26
CSHL1-208ENST00000558609 SYKP43405 635 aa16.66■□□□□ 0.26
CSHL1-208ENST00000558609 CYP2J2P51589 502 aa16.66■□□□□ 0.26
CSHL1-208ENST00000558609 NDUFA8P51970 172 aa16.66■□□□□ 0.26
CSHL1-208ENST00000558609 STARD6P59095 220 aa16.66■□□□□ 0.26
CSHL1-208ENST00000558609 MYO1EQ12965 1108 aa16.66■□□□□ 0.26
CSHL1-208ENST00000558609 STK4Q13043 487 aa16.66■□□□□ 0.26
CSHL1-208ENST00000558609 BECN1Q14457 450 aa16.66■□□□□ 0.26
CSHL1-208ENST00000558609 PSMD6Q15008 389 aa16.66■□□□□ 0.26
CSHL1-208ENST00000558609 KMT5BQ4FZB7 885 aa16.66■□□□□ 0.26
CSHL1-208ENST00000558609 ITIH5Q86UX2 942 aa16.66■□□□□ 0.26
CSHL1-208ENST00000558609 TOP6BLQ8N6T0 577 aa16.66■□□□□ 0.26
CSHL1-208ENST00000558609 RDH13Q8NBN7 331 aa16.66■□□□□ 0.26
CSHL1-208ENST00000558609 SHKBP1Q8TBC3 707 aa16.66■□□□□ 0.26
CSHL1-208ENST00000558609 SMARCD2Q92925 531 aa16.66■□□□□ 0.26
CSHL1-208ENST00000558609 SHDQ96IW2 340 aa16.66■□□□□ 0.26
CSHL1-208ENST00000558609 ZSWIM3Q96MP5 696 aa16.66■□□□□ 0.26
CSHL1-208ENST00000558609 ACBD6Q9BR61 282 aa16.66■□□□□ 0.26
CSHL1-208ENST00000558609 TRPV4Q9HBA0 871 aa16.66■□□□□ 0.26
CSHL1-208ENST00000558609 ZFP14Q9HCL3 533 aa16.66■□□□□ 0.26
CSHL1-208ENST00000558609 EXOC1Q9NV70 894 aa16.66■□□□□ 0.26
CSHL1-208ENST00000558609 R3HCC1Q9Y3T6 440 aaKnown RBP16.66■□□□□ 0.26
CSHL1-208ENST00000558609 SNX9Q9Y5X1 595 aa16.66■□□□□ 0.26
CSHL1-208ENST00000558609 GABRDO14764 452 aa16.65■□□□□ 0.26
CSHL1-208ENST00000558609 PRPF40AO75400 957 aaKnown RBP16.65■□□□□ 0.26
CSHL1-208ENST00000558609 FGF19O95750 216 aa16.65■□□□□ 0.26
CSHL1-208ENST00000558609 GJA1P17302 382 aa16.65■□□□□ 0.26
CSHL1-208ENST00000558609 TSPY1Q01534 308 aa16.65■□□□□ 0.26
CSHL1-208ENST00000558609 CYP24A1Q07973 514 aa16.65■□□□□ 0.26
CSHL1-208ENST00000558609 TEAD2Q15562 447 aa16.65■□□□□ 0.26
CSHL1-208ENST00000558609 MGAT5BQ3V5L5 792 aa16.65■□□□□ 0.26
CSHL1-208ENST00000558609 SLC44A4Q53GD3 710 aa16.65■□□□□ 0.26
CSHL1-208ENST00000558609 DPH6Q7L8W6 267 aa16.65■□□□□ 0.26
CSHL1-208ENST00000558609 ASCL5Q7RTU5 278 aa16.65■□□□□ 0.26
CSHL1-208ENST00000558609 TRAPPC11Q7Z392 1133 aa16.65■□□□□ 0.26
CSHL1-208ENST00000558609 LIMS2Q7Z4I7 341 aa16.65■□□□□ 0.26
CSHL1-208ENST00000558609 CCDC105Q8IYK2 499 aa16.65■□□□□ 0.26
CSHL1-208ENST00000558609 KIAA0895Q8NCT3 520 aa16.65■□□□□ 0.26
CSHL1-208ENST00000558609 GOLGA5Q8TBA6 731 aa16.65■□□□□ 0.26
CSHL1-208ENST00000558609 TMEM174Q8WUU8 243 aa16.65■□□□□ 0.26
CSHL1-208ENST00000558609 HPDLQ96IR7 371 aa16.65■□□□□ 0.26
CSHL1-208ENST00000558609 SEPT5Q99719 369 aaPredicted RBP16.65■□□□□ 0.26
CSHL1-208ENST00000558609 DDX43Q9NXZ2 648 aaKnown RBP16.65■□□□□ 0.26
CSHL1-208ENST00000558609 PCDHB5Q9Y5E4 795 aa16.65■□□□□ 0.26
CSHL1-208ENST00000558609 A0A1W2PRU2 124 aa16.64■□□□□ 0.25
CSHL1-208ENST00000558609 PROB1E7EW31 1015 aa16.64■□□□□ 0.25
CSHL1-208ENST00000558609 DLATP10515 647 aaKnown RBP16.64■□□□□ 0.25
CSHL1-208ENST00000558609 ATF6P18850 670 aa16.64■□□□□ 0.25
CSHL1-208ENST00000558609 TNNI1P19237 187 aa16.64■□□□□ 0.25
CSHL1-208ENST00000558609 RFX1P22670 979 aa16.64■□□□□ 0.25
CSHL1-208ENST00000558609 LHX1P48742 406 aa16.64■□□□□ 0.25
CSHL1-208ENST00000558609 MYL7Q01449 175 aa16.64■□□□□ 0.25
CSHL1-208ENST00000558609 PRKCQQ04759 706 aa16.64■□□□□ 0.25
CSHL1-208ENST00000558609 SNW1Q13573 536 aaKnown RBP16.64■□□□□ 0.25
CSHL1-208ENST00000558609 VEPH1Q14D04 833 aa16.64■□□□□ 0.25
CSHL1-208ENST00000558609 NFE2Q16621 373 aaPredicted RBP16.64■□□□□ 0.25
CSHL1-208ENST00000558609 SOWAHAQ2M3V2 549 aa16.64■□□□□ 0.25
CSHL1-208ENST00000558609 GAREM2Q75VX8 874 aa16.64■□□□□ 0.25
CSHL1-208ENST00000558609 DTWD2Q8NBA8 298 aa16.64■□□□□ 0.25
CSHL1-208ENST00000558609 ZSCAN18Q8TBC5 510 aaPredicted RBP16.64■□□□□ 0.25
CSHL1-208ENST00000558609 FNBP1Q96RU3 617 aa16.64■□□□□ 0.25
CSHL1-208ENST00000558609 CGRRF1Q99675 332 aa16.64■□□□□ 0.25
CSHL1-208ENST00000558609 LPIN3Q9BQK8 851 aa16.64■□□□□ 0.25
CSHL1-208ENST00000558609 DDX23Q9BUQ8 820 aaKnown RBP16.64■□□□□ 0.25
CSHL1-208ENST00000558609 ZNF334Q9HCZ1 680 aaPredicted RBP16.64■□□□□ 0.25
CSHL1-208ENST00000558609 TMLHEQ9NVH6 421 aa16.64■□□□□ 0.25
CSHL1-208ENST00000558609 ABI2Q9NYB9 513 aaPredicted RBP16.64■□□□□ 0.25
CSHL1-208ENST00000558609 SIT1Q9Y3P8 196 aa16.64■□□□□ 0.25
CSHL1-208ENST00000558609 EXOC3O60645 756 aa16.63■□□□□ 0.25
CSHL1-208ENST00000558609 RPN1P04843 607 aaKnown RBP16.63■□□□□ 0.25
CSHL1-208ENST00000558609 CDR1P51861 262 aa16.63■□□□□ 0.25
CSHL1-208ENST00000558609 MLF2Q15773 248 aaPredicted RBP16.63■□□□□ 0.25
CSHL1-208ENST00000558609 INTS6LQ5JSJ4 861 aaKnown RBP16.63■□□□□ 0.25
CSHL1-208ENST00000558609 OSTM1Q86WC4 334 aa16.63■□□□□ 0.25
CSHL1-208ENST00000558609 SLC9A9Q8IVB4 645 aa16.63■□□□□ 0.25
CSHL1-208ENST00000558609 ADGRF2Q8IZF7 708 aa16.63■□□□□ 0.25
CSHL1-208ENST00000558609 FSIP1Q8NA03 581 aa16.63■□□□□ 0.25
CSHL1-208ENST00000558609 FAM200AQ8TCP9 573 aa16.63■□□□□ 0.25
CSHL1-208ENST00000558609 DNASE1L2Q92874 299 aa16.63■□□□□ 0.25
CSHL1-208ENST00000558609 E2F7Q96AV8 911 aa16.63■□□□□ 0.25
CSHL1-208ENST00000558609 CCDC127Q96BQ5 260 aa16.63■□□□□ 0.25
CSHL1-208ENST00000558609 PKMYT1Q99640 499 aa16.63■□□□□ 0.25
CSHL1-208ENST00000558609 TRMT61BQ9BVS5 477 aaKnown RBP16.63■□□□□ 0.25
CSHL1-208ENST00000558609 GZF1Q9H116 711 aaPredicted RBP16.63■□□□□ 0.25
CSHL1-208ENST00000558609 KCTD10Q9H3F6 313 aa16.63■□□□□ 0.25
CSHL1-208ENST00000558609 ABCB6Q9NP58 842 aa16.63■□□□□ 0.25
CSHL1-208ENST00000558609 DMAC2Q9NW81 257 aa16.63■□□□□ 0.25
CSHL1-208ENST00000558609 PTPRZ1P23471 2315 aaPredicted RBP16.63■□□□□ 0.25
CSHL1-208ENST00000558609 PDXKO00764 312 aa16.62■□□□□ 0.25
CSHL1-208ENST00000558609 CST3P01034 146 aaPredicted RBP16.62■□□□□ 0.25
CSHL1-208ENST00000558609 FAM163BP0C2L3 166 aa16.62■□□□□ 0.25
CSHL1-208ENST00000558609 PSMC3P17980 439 aa16.62■□□□□ 0.25
CSHL1-208ENST00000558609 ACAT1P24752 427 aaKnown RBP16.62■□□□□ 0.25
CSHL1-208ENST00000558609 GABRR2P28476 465 aa16.62■□□□□ 0.25
CSHL1-208ENST00000558609 PCSK1P29120 753 aa16.62■□□□□ 0.25
CSHL1-208ENST00000558609 VIPR2P41587 438 aa16.62■□□□□ 0.25
CSHL1-208ENST00000558609 VITQ6UXI7 678 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms