RNA–Protein interactions for RNA: ENST00000558575.1

LINC01220-201, Transcript of long intergenic non-protein coding RNA 1220, humanhuman

TSL 1 (best) BASIC

Gene LINC01220, Length 715 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01220-201ENST00000558575 SUMF1Q8NBK3 374 aa16.68■□□□□ 0.26
LINC01220-201ENST00000558575 ELMO3Q96BJ8 720 aa16.68■□□□□ 0.26
LINC01220-201ENST00000558575 CLSTN3Q9BQT9 956 aa16.68■□□□□ 0.26
LINC01220-201ENST00000558575 XYLT2Q9H1B5 865 aa16.68■□□□□ 0.26
LINC01220-201ENST00000558575 PCDHB8Q9UN66 801 aa16.68■□□□□ 0.26
LINC01220-201ENST00000558575 PKD1L2Q7Z442 2459 aa16.68■□□□□ 0.26
LINC01220-201ENST00000558575 FASNP49327 2511 aaKnown RBP16.67■□□□□ 0.26
LINC01220-201ENST00000558575 COL4A3Q01955 1670 aa16.67■□□□□ 0.26
LINC01220-201ENST00000558575 KPNA7A9QM74 516 aa16.67■□□□□ 0.26
LINC01220-201ENST00000558575 TEX28O15482 410 aa16.67■□□□□ 0.26
LINC01220-201ENST00000558575 KRT13P13646 458 aa16.67■□□□□ 0.26
LINC01220-201ENST00000558575 GCLMP48507 274 aa16.67■□□□□ 0.26
LINC01220-201ENST00000558575 AP3M2P53677 418 aa16.67■□□□□ 0.26
LINC01220-201ENST00000558575 ATXN1P54253 815 aaKnown RBP16.67■□□□□ 0.26
LINC01220-201ENST00000558575 MYL6P60660 151 aa16.67■□□□□ 0.26
LINC01220-201ENST00000558575 CT47A1Q5JQC4 288 aaPredicted RBP16.67■□□□□ 0.26
LINC01220-201ENST00000558575 VARS2Q5ST30 1063 aaKnown RBP16.67■□□□□ 0.26
LINC01220-201ENST00000558575 SASS6Q6UVJ0 657 aa16.67■□□□□ 0.26
LINC01220-201ENST00000558575 DSTYKQ6XUX3 929 aa16.67■□□□□ 0.26
LINC01220-201ENST00000558575 SLC22A17Q8WUG5 538 aa16.67■□□□□ 0.26
LINC01220-201ENST00000558575 HPDLQ96IR7 371 aa16.67■□□□□ 0.26
LINC01220-201ENST00000558575 FUCA2Q9BTY2 467 aa16.67■□□□□ 0.26
LINC01220-201ENST00000558575 KCNK12Q9HB15 430 aa16.67■□□□□ 0.26
LINC01220-201ENST00000558575 ARMCX3Q9UH62 379 aaPredicted RBP16.67■□□□□ 0.26
LINC01220-201ENST00000558575 CEP295Q9C0D2 2601 aa16.67■□□□□ 0.26
LINC01220-201ENST00000558575 ZFYVE26Q68DK2 2539 aa16.67■□□□□ 0.26
LINC01220-201ENST00000558575 VWA8A3KMH1 1905 aa16.66■□□□□ 0.26
LINC01220-201ENST00000558575 CYB561D2O14569 222 aa16.66■□□□□ 0.26
LINC01220-201ENST00000558575 OAZ2O95190 189 aa16.66■□□□□ 0.26
LINC01220-201ENST00000558575 EPCAMP16422 314 aa16.66■□□□□ 0.26
LINC01220-201ENST00000558575 PAX3P23760 479 aa16.66■□□□□ 0.26
LINC01220-201ENST00000558575 PNPLA4P41247 253 aa16.66■□□□□ 0.26
LINC01220-201ENST00000558575 MARSP56192 900 aaKnown RBP16.66■□□□□ 0.26
LINC01220-201ENST00000558575 TYRO3Q06418 890 aa16.66■□□□□ 0.26
LINC01220-201ENST00000558575 ATAT1Q5SQI0 421 aa16.66■□□□□ 0.26
LINC01220-201ENST00000558575 LIMS2Q7Z4I7 341 aa16.66■□□□□ 0.26
LINC01220-201ENST00000558575 SLC35C1Q96A29 364 aa16.66■□□□□ 0.26
LINC01220-201ENST00000558575 ANO10Q9NW15 660 aa16.66■□□□□ 0.26
LINC01220-201ENST00000558575 GDAP2Q9NXN4 497 aa16.66■□□□□ 0.26
LINC01220-201ENST00000558575 DLGAP2Q9P1A6 1054 aa16.66■□□□□ 0.26
LINC01220-201ENST00000558575 FNIP2Q9P278 1114 aa16.66■□□□□ 0.26
LINC01220-201ENST00000558575 MTRRQ9UBK8 725 aa16.66■□□□□ 0.26
LINC01220-201ENST00000558575 SSX2IPQ9Y2D8 614 aa16.66■□□□□ 0.26
LINC01220-201ENST00000558575 CYP11A1P05108 521 aa16.65■□□□□ 0.26
LINC01220-201ENST00000558575 CFHP08603 1231 aa16.65■□□□□ 0.26
LINC01220-201ENST00000558575 TYMPP19971 482 aa16.65■□□□□ 0.26
LINC01220-201ENST00000558575 GTF2H1P32780 548 aa16.65■□□□□ 0.26
LINC01220-201ENST00000558575 CA8P35219 290 aa16.65■□□□□ 0.26
LINC01220-201ENST00000558575 BIRC3Q13489 604 aa16.65■□□□□ 0.26
LINC01220-201ENST00000558575 NCOA4Q13772 614 aa16.65■□□□□ 0.26
LINC01220-201ENST00000558575 BMS1Q14692 1282 aaKnown RBP16.65■□□□□ 0.26
LINC01220-201ENST00000558575 PSMD5Q16401 504 aa16.65■□□□□ 0.26
LINC01220-201ENST00000558575 STX1AQ16623 288 aa16.65■□□□□ 0.26
LINC01220-201ENST00000558575 SKOR2Q2VWA4 1001 aaPredicted RBP16.65■□□□□ 0.26
LINC01220-201ENST00000558575 SV2CQ496J9 727 aa16.65■□□□□ 0.26
LINC01220-201ENST00000558575 CBWD6Q4V339 395 aa16.65■□□□□ 0.26
LINC01220-201ENST00000558575 CBWD3Q5JTY5 395 aa16.65■□□□□ 0.26
LINC01220-201ENST00000558575 CBWD5Q5RIA9 395 aa16.65■□□□□ 0.26
LINC01220-201ENST00000558575 WSCD1Q658N2 575 aa16.65■□□□□ 0.26
LINC01220-201ENST00000558575 LILRA6Q6PI73 481 aa16.65■□□□□ 0.26
LINC01220-201ENST00000558575 ZC3H14Q6PJT7 736 aaKnown RBP16.65■□□□□ 0.26
LINC01220-201ENST00000558575 TRIM59Q8IWR1 403 aa16.65■□□□□ 0.26
LINC01220-201ENST00000558575 TAS1R2Q8TE23 839 aa16.65■□□□□ 0.26
LINC01220-201ENST00000558575 SEMA4DQ92854 862 aa16.65■□□□□ 0.26
LINC01220-201ENST00000558575 SYAP1Q96A49 352 aaPredicted RBP16.65■□□□□ 0.26
LINC01220-201ENST00000558575 DNAJC25Q9H1X3 360 aa16.65■□□□□ 0.26
LINC01220-201ENST00000558575 MMRN2Q9H8L6 949 aa16.65■□□□□ 0.26
LINC01220-201ENST00000558575 METTL14Q9HCE5 456 aaKnown RBP16.65■□□□□ 0.26
LINC01220-201ENST00000558575 DACH1Q9UI36 760 aa16.65■□□□□ 0.26
LINC01220-201ENST00000558575 L1RE1Q9UN81 338 aa16.65■□□□□ 0.26
LINC01220-201ENST00000558575 BACE2Q9Y5Z0 518 aa16.65■□□□□ 0.26
LINC01220-201ENST00000558575 CNOT1A5YKK6 2376 aaKnown RBP16.65■□□□□ 0.26
LINC01220-201ENST00000558575 RALGAPA1Q6GYQ0 2036 aa16.65■□□□□ 0.26
LINC01220-201ENST00000558575 DOCK6Q96HP0 2047 aa16.65■□□□□ 0.26
LINC01220-201ENST00000558575 MTCL1Q9Y4B5 1905 aaKnown RBP16.64■□□□□ 0.26
LINC01220-201ENST00000558575 PHACTR2O75167 634 aa16.64■□□□□ 0.25
LINC01220-201ENST00000558575 STAU1O95793 577 aaKnown RBP16.64■□□□□ 0.25
LINC01220-201ENST00000558575 HLA-DRAP01903 254 aa16.64■□□□□ 0.25
LINC01220-201ENST00000558575 DCNP07585 359 aaKnown RBP16.64■□□□□ 0.25
LINC01220-201ENST00000558575 CLCN4P51793 760 aa16.64■□□□□ 0.25
LINC01220-201ENST00000558575 TRPC3Q13507 836 aa16.64■□□□□ 0.25
LINC01220-201ENST00000558575 SOWAHAQ2M3V2 549 aa16.64■□□□□ 0.25
LINC01220-201ENST00000558575 CCDC40Q4G0X9 1142 aa16.64■□□□□ 0.25
LINC01220-201ENST00000558575 TMC5Q6UXY8 1006 aa16.64■□□□□ 0.25
LINC01220-201ENST00000558575 ANKS3Q6ZW76 656 aa16.64■□□□□ 0.25
LINC01220-201ENST00000558575 USP37Q86T82 979 aa16.64■□□□□ 0.25
LINC01220-201ENST00000558575 GLYCTKQ8IVS8 523 aa16.64■□□□□ 0.25
LINC01220-201ENST00000558575 APPL2Q8NEU8 664 aa16.64■□□□□ 0.25
LINC01220-201ENST00000558575 ENOX1Q8TC92 643 aaKnown RBP16.64■□□□□ 0.25
LINC01220-201ENST00000558575 ZNF560Q96MR9 790 aa16.64■□□□□ 0.25
LINC01220-201ENST00000558575 EMILIN2Q9BXX0 1053 aa16.64■□□□□ 0.25
LINC01220-201ENST00000558575 VRTNQ9H8Y1 702 aa16.64■□□□□ 0.25
LINC01220-201ENST00000558575 TBC1D17Q9HA65 648 aa16.64■□□□□ 0.25
LINC01220-201ENST00000558575 TMEM8AQ9HCN3 771 aa16.64■□□□□ 0.25
LINC01220-201ENST00000558575 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.64■□□□□ 0.25
LINC01220-201ENST00000558575 SAMSN1Q9NSI8 373 aaKnown RBP16.64■□□□□ 0.25
LINC01220-201ENST00000558575 DZANK1Q9NVP4 752 aa16.64■□□□□ 0.25
LINC01220-201ENST00000558575 FBXL5Q9UKA1 691 aa16.64■□□□□ 0.25
LINC01220-201ENST00000558575 SNX9Q9Y5X1 595 aa16.64■□□□□ 0.25
LINC01220-201ENST00000558575 SYCE3A1L190 88 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 100.7 ms