RNA–Protein interactions for RNA: ENST00000558544.5

TPM1-214, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-214ENST00000558544 KCNC3Q14003 757 aa18.65■□□□□ 0.58
TPM1-214ENST00000558544 APTXQ7Z2E3 356 aaKnown RBP18.65■□□□□ 0.58
TPM1-214ENST00000558544 ARHGEF19Q8IW93 802 aa18.65■□□□□ 0.58
TPM1-214ENST00000558544 ZCWPW1Q9H0M4 648 aa18.65■□□□□ 0.58
TPM1-214ENST00000558544 A8MXQ7 604 aa18.64■□□□□ 0.57
TPM1-214ENST00000558544 PDGFRBP09619 1106 aa18.64■□□□□ 0.57
TPM1-214ENST00000558544 FAM163BP0C2L3 166 aa18.64■□□□□ 0.57
TPM1-214ENST00000558544 CD58P19256 250 aa18.64■□□□□ 0.57
TPM1-214ENST00000558544 PCSK1P29120 753 aa18.64■□□□□ 0.57
TPM1-214ENST00000558544 CDR1P51861 262 aa18.64■□□□□ 0.57
TPM1-214ENST00000558544 PSMC1P62191 440 aaKnown RBP18.64■□□□□ 0.57
TPM1-214ENST00000558544 ADAM15Q13444 863 aa18.64■□□□□ 0.57
TPM1-214ENST00000558544 CUL2Q13617 745 aa18.64■□□□□ 0.57
TPM1-214ENST00000558544 CCDC142Q17RM4 750 aa18.64■□□□□ 0.57
TPM1-214ENST00000558544 SLC39A12Q504Y0 691 aa18.64■□□□□ 0.57
TPM1-214ENST00000558544 INTS6LQ5JSJ4 861 aaKnown RBP18.64■□□□□ 0.57
TPM1-214ENST00000558544 LILRA6Q6PI73 481 aa18.64■□□□□ 0.57
TPM1-214ENST00000558544 TRIM65Q6PJ69 517 aa18.64■□□□□ 0.57
TPM1-214ENST00000558544 RNF19BQ6ZMZ0 732 aa18.64■□□□□ 0.57
TPM1-214ENST00000558544 PPM1KQ8N3J5 372 aa18.64■□□□□ 0.57
TPM1-214ENST00000558544 RNF214Q8ND24 703 aa18.64■□□□□ 0.57
TPM1-214ENST00000558544 PABPC5Q96DU9 382 aaKnown RBP18.64■□□□□ 0.57
TPM1-214ENST00000558544 PGLYRP2Q96PD5 576 aa18.64■□□□□ 0.57
TPM1-214ENST00000558544 SYT15Q9BQS2 421 aa18.64■□□□□ 0.57
TPM1-214ENST00000558544 ACBD6Q9BR61 282 aa18.64■□□□□ 0.57
TPM1-214ENST00000558544 DPEP3Q9H4B8 488 aa18.64■□□□□ 0.57
TPM1-214ENST00000558544 CYP3A43Q9HB55 503 aa18.64■□□□□ 0.57
TPM1-214ENST00000558544 MAN1C1Q9NR34 630 aa18.64■□□□□ 0.57
TPM1-214ENST00000558544 HMGXB4Q9UGU5 601 aa18.64■□□□□ 0.57
TPM1-214ENST00000558544 FBXW11Q9UKB1 542 aa18.64■□□□□ 0.57
TPM1-214ENST00000558544 BARX2Q9UMQ3 279 aaPredicted RBP18.64■□□□□ 0.57
TPM1-214ENST00000558544 NCK2O43639 380 aa18.63■□□□□ 0.57
TPM1-214ENST00000558544 ATP2C2O75185 946 aa18.63■□□□□ 0.57
TPM1-214ENST00000558544 TBX10O75333 385 aa18.63■□□□□ 0.57
TPM1-214ENST00000558544 SRGAP2BP0DMP2 458 aa18.63■□□□□ 0.57
TPM1-214ENST00000558544 PON1P27169 355 aa18.63■□□□□ 0.57
TPM1-214ENST00000558544 APBA1Q02410 837 aa18.63■□□□□ 0.57
TPM1-214ENST00000558544 ORC1Q13415 861 aa18.63■□□□□ 0.57
TPM1-214ENST00000558544 COL19A1Q14993 1142 aa18.63■□□□□ 0.57
TPM1-214ENST00000558544 CTC1Q2NKJ3 1217 aa18.63■□□□□ 0.57
TPM1-214ENST00000558544 RRAGAQ7L523 313 aa18.63■□□□□ 0.57
TPM1-214ENST00000558544 LRRTM3Q86VH5 581 aa18.63■□□□□ 0.57
TPM1-214ENST00000558544 KREMEN2Q8NCW0 462 aa18.63■□□□□ 0.57
TPM1-214ENST00000558544 ZNF461Q8TAF7 563 aa18.63■□□□□ 0.57
TPM1-214ENST00000558544 CASP10Q92851 521 aa18.63■□□□□ 0.57
TPM1-214ENST00000558544 KAT5Q92993 513 aa18.63■□□□□ 0.57
TPM1-214ENST00000558544 FAXDC2Q96IV6 333 aa18.63■□□□□ 0.57
TPM1-214ENST00000558544 CDH9Q9ULB4 789 aa18.63■□□□□ 0.57
TPM1-214ENST00000558544 LRRC10BA6NIK2 292 aa18.62■□□□□ 0.57
TPM1-214ENST00000558544 SPDYE4A6NLX3 237 aa18.62■□□□□ 0.57
TPM1-214ENST00000558544 LGALS16A8MUM7 142 aa18.62■□□□□ 0.57
TPM1-214ENST00000558544 ABLIM3O94929 683 aa18.62■□□□□ 0.57
TPM1-214ENST00000558544 TBXAS1P24557 533 aaPredicted RBP18.62■□□□□ 0.57
TPM1-214ENST00000558544 NDST1P52848 882 aa18.62■□□□□ 0.57
TPM1-214ENST00000558544 DLX2Q07687 328 aaPredicted RBP18.62■□□□□ 0.57
TPM1-214ENST00000558544 ADCY1Q08828 1119 aa18.62■□□□□ 0.57
TPM1-214ENST00000558544 INCA1Q0VD86 236 aa18.62■□□□□ 0.57
TPM1-214ENST00000558544 KCNMA1Q12791 1236 aa18.62■□□□□ 0.57
TPM1-214ENST00000558544 GPR17Q13304 367 aa18.62■□□□□ 0.57
TPM1-214ENST00000558544 FKBP15Q5T1M5 1219 aa18.62■□□□□ 0.57
TPM1-214ENST00000558544 TPGS2Q68CL5 300 aa18.62■□□□□ 0.57
TPM1-214ENST00000558544 PHLDB3Q6NSJ2 640 aa18.62■□□□□ 0.57
TPM1-214ENST00000558544 DCP1BQ8IZD4 617 aaKnown RBP18.62■□□□□ 0.57
TPM1-214ENST00000558544 CRTAC1Q9NQ79 661 aa18.62■□□□□ 0.57
TPM1-214ENST00000558544 CISHQ9NSE2 258 aa18.62■□□□□ 0.57
TPM1-214ENST00000558544 TMLHEQ9NVH6 421 aa18.62■□□□□ 0.57
TPM1-214ENST00000558544 MYBPHLA2RUH7 354 aa18.61■□□□□ 0.57
TPM1-214ENST00000558544 MTMR11A4FU01 709 aa18.61■□□□□ 0.57
TPM1-214ENST00000558544 VNN2O95498 520 aa18.61■□□□□ 0.57
TPM1-214ENST00000558544 ATF2P15336 505 aa18.61■□□□□ 0.57
TPM1-214ENST00000558544 LTBRP36941 435 aa18.61■□□□□ 0.57
TPM1-214ENST00000558544 UBXN1Q04323 297 aa18.61■□□□□ 0.57
TPM1-214ENST00000558544 GJB7Q6PEY0 223 aa18.61■□□□□ 0.57
TPM1-214ENST00000558544 TMEM184AQ6ZMB5 413 aa18.61■□□□□ 0.57
TPM1-214ENST00000558544 TWNKQ96RR1 684 aa18.61■□□□□ 0.57
TPM1-214ENST00000558544 PKMYT1Q99640 499 aa18.61■□□□□ 0.57
TPM1-214ENST00000558544 LPIN3Q9BQK8 851 aa18.61■□□□□ 0.57
TPM1-214ENST00000558544 LSM14BQ9BX40 385 aaKnown RBP18.61■□□□□ 0.57
TPM1-214ENST00000558544 UBE2ZQ9H832 354 aaPredicted RBP18.61■□□□□ 0.57
TPM1-214ENST00000558544 SIX2Q9NPC8 291 aa18.61■□□□□ 0.57
TPM1-214ENST00000558544 CLEC1BQ9P126 229 aa18.61■□□□□ 0.57
TPM1-214ENST00000558544 APEX2Q9UBZ4 518 aa18.61■□□□□ 0.57
TPM1-214ENST00000558544 AFF4Q9UHB7 1163 aaKnown RBP18.61■□□□□ 0.57
TPM1-214ENST00000558544 GTF3C4Q9UKN8 822 aa18.61■□□□□ 0.57
TPM1-214ENST00000558544 CILPO75339 1184 aa18.6■□□□□ 0.57
TPM1-214ENST00000558544 SEC24AO95486 1093 aa18.6■□□□□ 0.57
TPM1-214ENST00000558544 C1RP00736 705 aa18.6■□□□□ 0.57
TPM1-214ENST00000558544 SERPINC1P01008 464 aa18.6■□□□□ 0.57
TPM1-214ENST00000558544 C8AP07357 584 aa18.6■□□□□ 0.57
TPM1-214ENST00000558544 GCNT1Q02742 428 aa18.6■□□□□ 0.57
TPM1-214ENST00000558544 MDH1BQ5I0G3 518 aa18.6■□□□□ 0.57
TPM1-214ENST00000558544 LIN9Q5TKA1 542 aa18.6■□□□□ 0.57
TPM1-214ENST00000558544 ANKRD54Q6NXT1 300 aa18.6■□□□□ 0.57
TPM1-214ENST00000558544 ACOT1Q86TX2 421 aa18.6■□□□□ 0.57
TPM1-214ENST00000558544 UNC93AQ86WB7 457 aa18.6■□□□□ 0.57
TPM1-214ENST00000558544 UBR7Q8N806 425 aa18.6■□□□□ 0.57
TPM1-214ENST00000558544 B3GALNT2Q8NCR0 500 aa18.6■□□□□ 0.57
TPM1-214ENST00000558544 SLC7A14Q8TBB6 771 aa18.6■□□□□ 0.57
TPM1-214ENST00000558544 MYLPFQ96A32 169 aa18.6■□□□□ 0.57
TPM1-214ENST00000558544 DOCK6Q96HP0 2047 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms