RNA–Protein interactions for RNA: ENST00000558172.5

LRRC28-204, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 644 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-204ENST00000558172 FOSL2P15408 326 aa11.18□□□□□ -0.62
LRRC28-204ENST00000558172 RPL17P18621 184 aaKnown RBP11.18□□□□□ -0.62
LRRC28-204ENST00000558172 GPR17Q13304 367 aa11.18□□□□□ -0.62
LRRC28-204ENST00000558172 SYCP1Q15431 976 aa11.18□□□□□ -0.62
LRRC28-204ENST00000558172 NFE2Q16621 373 aaPredicted RBP11.18□□□□□ -0.62
LRRC28-204ENST00000558172 DUSP6Q16828 381 aa11.18□□□□□ -0.62
LRRC28-204ENST00000558172 TPGS2Q68CL5 300 aa11.18□□□□□ -0.62
LRRC28-204ENST00000558172 ELMSAN1Q6PJG2 1045 aa11.18□□□□□ -0.62
LRRC28-204ENST00000558172 RSPO2Q6UXX9 243 aaPredicted RBP11.18□□□□□ -0.62
LRRC28-204ENST00000558172 OSTM1Q86WC4 334 aa11.18□□□□□ -0.62
LRRC28-204ENST00000558172 GAS2L3Q86XJ1 694 aa11.18□□□□□ -0.62
LRRC28-204ENST00000558172 ZNF461Q8TAF7 563 aa11.18□□□□□ -0.62
LRRC28-204ENST00000558172 C2orf15Q8WU43 125 aaKnown RBP11.18□□□□□ -0.62
LRRC28-204ENST00000558172 HDAC7Q8WUI4 952 aa11.18□□□□□ -0.62
LRRC28-204ENST00000558172 ELMO3Q96BJ8 720 aa11.18□□□□□ -0.62
LRRC28-204ENST00000558172 PCMTD1Q96MG8 357 aaPredicted RBP11.18□□□□□ -0.62
LRRC28-204ENST00000558172 NAP1L5Q96NT1 182 aaPredicted RBP11.18□□□□□ -0.62
LRRC28-204ENST00000558172 RTP3Q9BQQ7 232 aa11.18□□□□□ -0.62
LRRC28-204ENST00000558172 LSM14BQ9BX40 385 aaKnown RBP11.18□□□□□ -0.62
LRRC28-204ENST00000558172 NT5C1AQ9BXI3 368 aa11.18□□□□□ -0.62
LRRC28-204ENST00000558172 ZCWPW1Q9H0M4 648 aa11.18□□□□□ -0.62
LRRC28-204ENST00000558172 SDCBP2Q9H190 292 aa11.18□□□□□ -0.62
LRRC28-204ENST00000558172 CISHQ9NSE2 258 aa11.18□□□□□ -0.62
LRRC28-204ENST00000558172 PCDHGC5Q9Y5F6 944 aa11.18□□□□□ -0.62
LRRC28-204ENST00000558172 TEX33O43247 280 aa11.17□□□□□ -0.62
LRRC28-204ENST00000558172 CILPO75339 1184 aa11.17□□□□□ -0.62
LRRC28-204ENST00000558172 ABLIM3O94929 683 aa11.17□□□□□ -0.62
LRRC28-204ENST00000558172 GLUD1P00367 558 aa11.17□□□□□ -0.62
LRRC28-204ENST00000558172 PDGFRBP09619 1106 aa11.17□□□□□ -0.62
LRRC28-204ENST00000558172 SRGAP2BP0DMP2 458 aa11.17□□□□□ -0.62
LRRC28-204ENST00000558172 CPB1P15086 417 aa11.17□□□□□ -0.62
LRRC28-204ENST00000558172 CD58P19256 250 aa11.17□□□□□ -0.62
LRRC28-204ENST00000558172 LMO2P25791 158 aa11.17□□□□□ -0.62
LRRC28-204ENST00000558172 RAP1GAPP47736 663 aa11.17□□□□□ -0.62
LRRC28-204ENST00000558172 NRIP1P48552 1158 aa11.17□□□□□ -0.62
LRRC28-204ENST00000558172 CLCN4P51793 760 aa11.17□□□□□ -0.62
LRRC28-204ENST00000558172 NDST1P52848 882 aa11.17□□□□□ -0.62
LRRC28-204ENST00000558172 ROR1Q01973 937 aa11.17□□□□□ -0.62
LRRC28-204ENST00000558172 TCEAL5Q5H9L2 206 aa11.17□□□□□ -0.62
LRRC28-204ENST00000558172 INTS6LQ5JSJ4 861 aaKnown RBP11.17□□□□□ -0.62
LRRC28-204ENST00000558172 KLHDC7AQ5VTJ3 777 aa11.17□□□□□ -0.62
LRRC28-204ENST00000558172 DPY19L2P1Q6NXN4 242 aa11.17□□□□□ -0.62
LRRC28-204ENST00000558172 FAM171BQ6P995 826 aa11.17□□□□□ -0.62
LRRC28-204ENST00000558172 LILRA6Q6PI73 481 aa11.17□□□□□ -0.62
LRRC28-204ENST00000558172 SARM1Q6SZW1 724 aa11.17□□□□□ -0.62
LRRC28-204ENST00000558172 RTL10Q7L3V2 364 aa11.17□□□□□ -0.62
LRRC28-204ENST00000558172 RRAGAQ7L523 313 aa11.17□□□□□ -0.62
LRRC28-204ENST00000558172 ADGRD2Q7Z7M1 963 aa11.17□□□□□ -0.62
LRRC28-204ENST00000558172 RBM23Q86U06 439 aaKnown RBP11.17□□□□□ -0.62
LRRC28-204ENST00000558172 PALB2Q86YC2 1186 aa11.17□□□□□ -0.62
LRRC28-204ENST00000558172 ARHGEF19Q8IW93 802 aa11.17□□□□□ -0.62
LRRC28-204ENST00000558172 CRYBG2Q8N1P7 616 aa11.17□□□□□ -0.62
LRRC28-204ENST00000558172 EFHBQ8N7U6 833 aa11.17□□□□□ -0.62
LRRC28-204ENST00000558172 NEK11Q8NG66 645 aa11.17□□□□□ -0.62
LRRC28-204ENST00000558172 OR10T2Q8NGX3 314 aa11.17□□□□□ -0.62
LRRC28-204ENST00000558172 SYT15Q9BQS2 421 aa11.17□□□□□ -0.62
LRRC28-204ENST00000558172 PLEKHA4Q9H4M7 779 aa11.17□□□□□ -0.62
LRRC28-204ENST00000558172 SIX2Q9NPC8 291 aa11.17□□□□□ -0.62
LRRC28-204ENST00000558172 IFNKQ9P0W0 207 aa11.17□□□□□ -0.62
LRRC28-204ENST00000558172 HSFX1Q9UBD0 423 aa11.17□□□□□ -0.62
LRRC28-204ENST00000558172 AFF4Q9UHB7 1163 aaKnown RBP11.17□□□□□ -0.62
LRRC28-204ENST00000558172 DNAJC12Q9UKB3 198 aa11.17□□□□□ -0.62
LRRC28-204ENST00000558172 SIK3Q9Y2K2 1263 aa11.17□□□□□ -0.62
LRRC28-204ENST00000558172 WDR27A2RRH5 827 aa11.16□□□□□ -0.62
LRRC28-204ENST00000558172 PER2O15055 1255 aa11.16□□□□□ -0.62
LRRC28-204ENST00000558172 ADAM12O43184 909 aa11.16□□□□□ -0.62
LRRC28-204ENST00000558172 TGM5O43548 720 aa11.16□□□□□ -0.62
LRRC28-204ENST00000558172 ATF2P15336 505 aa11.16□□□□□ -0.62
LRRC28-204ENST00000558172 UCHL3P15374 230 aa11.16□□□□□ -0.62
LRRC28-204ENST00000558172 PTPN1P18031 435 aaKnown RBP11.16□□□□□ -0.62
LRRC28-204ENST00000558172 ACAT1P24752 427 aaKnown RBP11.16□□□□□ -0.62
LRRC28-204ENST00000558172 ELF1P32519 619 aa11.16□□□□□ -0.62
LRRC28-204ENST00000558172 ARPP19P56211 112 aa11.16□□□□□ -0.62
LRRC28-204ENST00000558172 TMEM184AQ6ZMB5 413 aa11.16□□□□□ -0.62
LRRC28-204ENST00000558172 C4orf50Q6ZRC1 276 aa11.16□□□□□ -0.62
LRRC28-204ENST00000558172 GLYCTKQ8IVS8 523 aa11.16□□□□□ -0.62
LRRC28-204ENST00000558172 UBR7Q8N806 425 aa11.16□□□□□ -0.62
LRRC28-204ENST00000558172 B3GALNT2Q8NCR0 500 aa11.16□□□□□ -0.62
LRRC28-204ENST00000558172 MYCBPAPQ8TBZ2 947 aa11.16□□□□□ -0.62
LRRC28-204ENST00000558172 SPPL2BQ8TCT7 592 aa11.16□□□□□ -0.62
LRRC28-204ENST00000558172 SLC22A17Q8WUG5 538 aa11.16□□□□□ -0.62
LRRC28-204ENST00000558172 CASP10Q92851 521 aa11.16□□□□□ -0.62
LRRC28-204ENST00000558172 IQCDQ96DY2 449 aa11.16□□□□□ -0.62
LRRC28-204ENST00000558172 TMEM176AQ96HP8 235 aa11.16□□□□□ -0.62
LRRC28-204ENST00000558172 KREMEN1Q96MU8 473 aa11.16□□□□□ -0.62
LRRC28-204ENST00000558172 ARID3AQ99856 593 aa11.16□□□□□ -0.62
LRRC28-204ENST00000558172 NUP58Q9BVL2 599 aa11.16□□□□□ -0.62
LRRC28-204ENST00000558172 STK33Q9BYT3 514 aa11.16□□□□□ -0.62
LRRC28-204ENST00000558172 XPO4Q9C0E2 1151 aaKnown RBP11.16□□□□□ -0.62
LRRC28-204ENST00000558172 IGFLR1Q9H665 355 aa11.16□□□□□ -0.62
LRRC28-204ENST00000558172 KIAA1257Q9ULG3 409 aa11.16□□□□□ -0.62
LRRC28-204ENST00000558172 CNTN6Q9UQ52 1028 aa11.16□□□□□ -0.62
LRRC28-204ENST00000558172 PCDHB5Q9Y5E4 795 aa11.16□□□□□ -0.62
LRRC28-204ENST00000558172 PCDHB4Q9Y5E5 795 aa11.16□□□□□ -0.62
LRRC28-204ENST00000558172 MYBPHLA2RUH7 354 aa11.15□□□□□ -0.62
LRRC28-204ENST00000558172 PAEPP09466 180 aa11.15□□□□□ -0.62
LRRC28-204ENST00000558172 ACO1P21399 889 aaKnown RBP11.15□□□□□ -0.62
LRRC28-204ENST00000558172 TUFMP49411 452 aaKnown RBP11.15□□□□□ -0.62
LRRC28-204ENST00000558172 PLCB2Q00722 1185 aa11.15□□□□□ -0.62
LRRC28-204ENST00000558172 HYAL1Q12794 435 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms