RNA–Protein interactions for RNA: ENST00000558117.1

RTF1-204, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-204ENST00000558117 C1orf141Q5JVX7 400 aa7.34□□□□□ -1.23
RTF1-204ENST00000558117 BTNL9Q6UXG8 535 aa7.34□□□□□ -1.23
RTF1-204ENST00000558117 SNX33Q8WV41 574 aa7.34□□□□□ -1.23
RTF1-204ENST00000558117 STAG1Q8WVM7 1258 aa7.34□□□□□ -1.23
RTF1-204ENST00000558117 RIN2Q8WYP3 895 aaPredicted RBP7.34□□□□□ -1.23
RTF1-204ENST00000558117 FATE1Q969F0 183 aa7.34□□□□□ -1.23
RTF1-204ENST00000558117 MIEF2Q96C03 454 aa7.34□□□□□ -1.23
RTF1-204ENST00000558117 FUBP3Q96I24 572 aaKnown RBP eCLIP7.34□□□□□ -1.23
RTF1-204ENST00000558117 SMAD5Q99717 465 aaKnown RBP7.34□□□□□ -1.23
RTF1-204ENST00000558117 ACE2Q9BYF1 805 aaPredicted RBP7.34□□□□□ -1.23
RTF1-204ENST00000558117 KRTAP9-3Q9BYQ3 159 aa7.34□□□□□ -1.23
RTF1-204ENST00000558117 KRTAP4-9Q9BYQ8 210 aa7.34□□□□□ -1.23
RTF1-204ENST00000558117 ENKD1Q9H0I2 346 aa7.34□□□□□ -1.23
RTF1-204ENST00000558117 MKS1Q9NXB0 559 aa7.34□□□□□ -1.23
RTF1-204ENST00000558117 SCOCQ9UIL1 159 aa7.34□□□□□ -1.23
RTF1-204ENST00000558117 FZD1Q9UP38 647 aa7.34□□□□□ -1.23
RTF1-204ENST00000558117 GPR45Q9Y5Y3 372 aa7.34□□□□□ -1.23
RTF1-204ENST00000558117 TPRP12270 2363 aaKnown RBP7.34□□□□□ -1.23
RTF1-204ENST00000558117 CFAP47Q6ZTR5 3102 aa7.34□□□□□ -1.24
RTF1-204ENST00000558117 ZSWIM8A7E2V4 1837 aa7.34□□□□□ -1.24
RTF1-204ENST00000558117 MATN3O15232 486 aa7.33□□□□□ -1.24
RTF1-204ENST00000558117 STC2O76061 302 aa7.33□□□□□ -1.24
RTF1-204ENST00000558117 GYPEP15421 78 aa7.33□□□□□ -1.24
RTF1-204ENST00000558117 NCLP19338 710 aaKnown RBP7.33□□□□□ -1.24
RTF1-204ENST00000558117 KCTD2Q14681 263 aa7.33□□□□□ -1.24
RTF1-204ENST00000558117 KIF22Q14807 665 aa7.33□□□□□ -1.24
RTF1-204ENST00000558117 AMOTL1Q8IY63 956 aa7.33□□□□□ -1.24
RTF1-204ENST00000558117 GSPT2Q8IYD1 628 aaKnown RBP7.33□□□□□ -1.24
RTF1-204ENST00000558117 LILRA3Q8N6C8 439 aaPredicted RBP7.33□□□□□ -1.24
RTF1-204ENST00000558117 JADE3Q92613 823 aa7.33□□□□□ -1.24
RTF1-204ENST00000558117 ZNF512Q96ME7 567 aaPredicted RBP7.33□□□□□ -1.24
RTF1-204ENST00000558117 DEFB118Q96PH6 123 aa7.33□□□□□ -1.24
RTF1-204ENST00000558117 DBNDD1Q9H9R9 158 aa7.33□□□□□ -1.24
RTF1-204ENST00000558117 DMRT3Q9NQL9 472 aa7.33□□□□□ -1.24
RTF1-204ENST00000558117 AURKAIP1Q9NWT8 199 aaPredicted RBP7.33□□□□□ -1.24
RTF1-204ENST00000558117 ZFHX2Q9C0A1 2572 aaPredicted RBP7.33□□□□□ -1.24
RTF1-204ENST00000558117 DCHS1Q96JQ0 3298 aa7.33□□□□□ -1.24
RTF1-204ENST00000558117 LAMB1P07942 1786 aa7.33□□□□□ -1.24
RTF1-204ENST00000558117 RBP3P10745 1247 aa7.32□□□□□ -1.24
RTF1-204ENST00000558117 GNAT2P19087 354 aa7.32□□□□□ -1.24
RTF1-204ENST00000558117 ADSLP30566 484 aaPredicted RBP7.32□□□□□ -1.24
RTF1-204ENST00000558117 EIF4A2Q14240 407 aaKnown RBP7.32□□□□□ -1.24
RTF1-204ENST00000558117 PTPN21Q16825 1174 aa7.32□□□□□ -1.24
RTF1-204ENST00000558117 ANO4Q32M45 955 aa7.32□□□□□ -1.24
RTF1-204ENST00000558117 C19orf54Q5BKX5 351 aa7.32□□□□□ -1.24
RTF1-204ENST00000558117 RNF207Q6ZRF8 634 aa7.32□□□□□ -1.24
RTF1-204ENST00000558117 PPM1NQ8N819 430 aa7.32□□□□□ -1.24
RTF1-204ENST00000558117 RAET1EQ8TD07 263 aa7.32□□□□□ -1.24
RTF1-204ENST00000558117 TMX4Q9H1E5 349 aaPredicted RBP7.32□□□□□ -1.24
RTF1-204ENST00000558117 VPS11Q9H270 941 aa7.32□□□□□ -1.24
RTF1-204ENST00000558117 ZBTB21Q9ULJ3 1066 aa7.32□□□□□ -1.24
RTF1-204ENST00000558117 FASNP49327 2511 aaKnown RBP7.32□□□□□ -1.24
RTF1-204ENST00000558117 TNFRSF1AP19438 455 aa7.31□□□□□ -1.24
RTF1-204ENST00000558117 TAF1P21675 1872 aa7.31□□□□□ -1.24
RTF1-204ENST00000558117 PTPRZ1P23471 2315 aaPredicted RBP7.31□□□□□ -1.24
RTF1-204ENST00000558117 SLC5A3P53794 718 aa7.31□□□□□ -1.24
RTF1-204ENST00000558117 PPP3CAQ08209 521 aa7.31□□□□□ -1.24
RTF1-204ENST00000558117 CNGB1Q14028 1251 aaPredicted RBP7.31□□□□□ -1.24
RTF1-204ENST00000558117 ODF1Q14990 250 aa7.31□□□□□ -1.24
RTF1-204ENST00000558117 ACAP2Q15057 778 aa7.31□□□□□ -1.24
RTF1-204ENST00000558117 MBNL2Q5VZF2 373 aaKnown RBP7.31□□□□□ -1.24
RTF1-204ENST00000558117 SPTY2D1Q68D10 685 aaPredicted RBP7.31□□□□□ -1.24
RTF1-204ENST00000558117 FAM180AQ6UWF9 173 aa7.31□□□□□ -1.24
RTF1-204ENST00000558117 C1orf210Q8IVY1 113 aa7.31□□□□□ -1.24
RTF1-204ENST00000558117 MB21D1Q8N884 522 aa7.31□□□□□ -1.24
RTF1-204ENST00000558117 GPR156Q8NFN8 814 aa7.31□□□□□ -1.24
RTF1-204ENST00000558117 BRI3BPQ8WY22 251 aa7.31□□□□□ -1.24
RTF1-204ENST00000558117 PPM1EQ8WY54 764 aa7.31□□□□□ -1.24
RTF1-204ENST00000558117 IL17RAQ96F46 866 aa7.31□□□□□ -1.24
RTF1-204ENST00000558117 CDC5LQ99459 802 aaKnown RBP7.31□□□□□ -1.24
RTF1-204ENST00000558117 TEX13AQ9BXU3 409 aaPredicted RBP7.31□□□□□ -1.24
RTF1-204ENST00000558117 GREM2Q9H772 168 aa7.31□□□□□ -1.24
RTF1-204ENST00000558117 MYOZ2Q9NPC6 264 aa7.31□□□□□ -1.24
RTF1-204ENST00000558117 DDX56Q9NY93 547 aaKnown RBP7.31□□□□□ -1.24
RTF1-204ENST00000558117 HECAQ9UBI9 543 aaPredicted RBP7.31□□□□□ -1.24
RTF1-204ENST00000558117 DUOX1Q9NRD9 1551 aa7.3□□□□□ -1.24
RTF1-204ENST00000558117 AKR1B10O60218 316 aa7.3□□□□□ -1.24
RTF1-204ENST00000558117 TLR2O60603 784 aa7.3□□□□□ -1.24
RTF1-204ENST00000558117 GSPT1P15170 499 aaKnown RBP7.3□□□□□ -1.24
RTF1-204ENST00000558117 MAN2A2P49641 1150 aa7.3□□□□□ -1.24
RTF1-204ENST00000558117 FAM214AQ32MH5 1076 aa7.3□□□□□ -1.24
RTF1-204ENST00000558117 MUM1L1Q5H9M0 696 aa7.3□□□□□ -1.24
RTF1-204ENST00000558117 AKNAD1Q5T1N1 836 aa7.3□□□□□ -1.24
RTF1-204ENST00000558117 Q6ZVL8 140 aa7.3□□□□□ -1.24
RTF1-204ENST00000558117 ELOA2Q8IYF1 753 aaPredicted RBP7.3□□□□□ -1.24
RTF1-204ENST00000558117 FAM43AQ8N2R8 423 aa7.3□□□□□ -1.24
RTF1-204ENST00000558117 EXTL1Q92935 676 aa7.3□□□□□ -1.24
RTF1-204ENST00000558117 CSRNP2Q9H175 543 aa7.3□□□□□ -1.24
RTF1-204ENST00000558117 KCNH6Q9H252 994 aa7.3□□□□□ -1.24
RTF1-204ENST00000558117 TUBD1Q9UJT1 453 aa7.3□□□□□ -1.24
RTF1-204ENST00000558117 ABCC4O15439 1325 aa7.29□□□□□ -1.24
RTF1-204ENST00000558117 ADGRA2Q96PE1 1338 aa7.29□□□□□ -1.24
RTF1-204ENST00000558117 NCOR2Q9Y618 2525 aa7.29□□□□□ -1.24
RTF1-204ENST00000558117 KLHL33A6NCF5 533 aa7.29□□□□□ -1.24
RTF1-204ENST00000558117 RNMTO43148 476 aaKnown RBP7.29□□□□□ -1.24
RTF1-204ENST00000558117 XPOTO43592 962 aaKnown RBP7.29□□□□□ -1.24
RTF1-204ENST00000558117 ECE2O60344 883 aa7.29□□□□□ -1.24
RTF1-204ENST00000558117 PHF2O75151 1096 aa7.29□□□□□ -1.24
RTF1-204ENST00000558117 ITGA10O75578 1167 aa7.29□□□□□ -1.24
RTF1-204ENST00000558117 C5AR1P21730 350 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms