RNA–Protein interactions for RNA: ENST00000558093.1

SPG11-206, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 526 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-206ENST00000558093 TAAR9Q96RI9 348 aa4.27□□□□□ -1.73
SPG11-206ENST00000558093 ACO2Q99798 780 aaKnown RBP4.27□□□□□ -1.73
SPG11-206ENST00000558093 MRPS18AQ9NVS2 196 aaKnown RBP4.27□□□□□ -1.73
SPG11-206ENST00000558093 G3BP2Q9UN86 482 aaKnown RBP4.27□□□□□ -1.73
SPG11-206ENST00000558093 EID1Q9Y6B2 187 aa4.27□□□□□ -1.73
SPG11-206ENST00000558093 KAT6AQ92794 2004 aa4.27□□□□□ -1.73
SPG11-206ENST00000558093 SPATA31A6Q5VVP1 1343 aa4.26□□□□□ -1.73
SPG11-206ENST00000558093 A0A1W2PPL8 197 aa4.26□□□□□ -1.73
SPG11-206ENST00000558093 CCDC151A5D8V7 595 aa4.26□□□□□ -1.73
SPG11-206ENST00000558093 OVOL3O00110 214 aa4.26□□□□□ -1.73
SPG11-206ENST00000558093 MYO1CO00159 1063 aa4.26□□□□□ -1.73
SPG11-206ENST00000558093 MPPED1O15442 326 aa4.26□□□□□ -1.73
SPG11-206ENST00000558093 PROM1O43490 865 aa4.26□□□□□ -1.73
SPG11-206ENST00000558093 CTNND1O60716 968 aaKnown RBP4.26□□□□□ -1.73
SPG11-206ENST00000558093 GRPP07492 148 aa4.26□□□□□ -1.73
SPG11-206ENST00000558093 GCLCP48506 637 aaPredicted RBP4.26□□□□□ -1.73
SPG11-206ENST00000558093 NXPH1P58417 271 aa4.26□□□□□ -1.73
SPG11-206ENST00000558093 SIM1P81133 766 aaPredicted RBP4.26□□□□□ -1.73
SPG11-206ENST00000558093 AMOTQ4VCS5 1084 aa4.26□□□□□ -1.73
SPG11-206ENST00000558093 AKNAD1Q5T1N1 836 aa4.26□□□□□ -1.73
SPG11-206ENST00000558093 RBM20Q5T481 1227 aaKnown RBP4.26□□□□□ -1.73
SPG11-206ENST00000558093 EMC10Q5UCC4 262 aa4.26□□□□□ -1.73
SPG11-206ENST00000558093 PPP4R4Q6NUP7 873 aa4.26□□□□□ -1.73
SPG11-206ENST00000558093 EPM2AIP1Q7L775 607 aaPredicted RBP4.26□□□□□ -1.73
SPG11-206ENST00000558093 RD3Q7Z3Z2 195 aa4.26□□□□□ -1.73
SPG11-206ENST00000558093 GRASPQ7Z6J2 395 aaPredicted RBP4.26□□□□□ -1.73
SPG11-206ENST00000558093 PEG10Q86TG7 708 aaKnown RBP4.26□□□□□ -1.73
SPG11-206ENST00000558093 CELF5Q8N6W0 485 aaKnown RBP4.26□□□□□ -1.73
SPG11-206ENST00000558093 SIMC1Q8NDZ2 872 aa4.26□□□□□ -1.73
SPG11-206ENST00000558093 PLBD2Q8NHP8 589 aa4.26□□□□□ -1.73
SPG11-206ENST00000558093 SLC35G2Q8TBE7 412 aa4.26□□□□□ -1.73
SPG11-206ENST00000558093 SLC46A1Q96NT5 459 aa4.26□□□□□ -1.73
SPG11-206ENST00000558093 PUS7Q96PZ0 661 aaKnown RBP4.26□□□□□ -1.73
SPG11-206ENST00000558093 ACTRT3Q9BYD9 372 aa4.26□□□□□ -1.73
SPG11-206ENST00000558093 ANLNQ9NQW6 1124 aa4.26□□□□□ -1.73
SPG11-206ENST00000558093 PIH1D1Q9NWS0 290 aaKnown RBP4.26□□□□□ -1.73
SPG11-206ENST00000558093 HESX1Q9UBX0 185 aa4.26□□□□□ -1.73
SPG11-206ENST00000558093 PLEKHM1Q9Y4G2 1056 aa4.26□□□□□ -1.73
SPG11-206ENST00000558093 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.26□□□□□ -1.73
SPG11-206ENST00000558093 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.26□□□□□ -1.73
SPG11-206ENST00000558093 SPATA31A3Q5VYP0 1347 aa4.25□□□□□ -1.73
SPG11-206ENST00000558093 SALL3Q9BXA9 1300 aa4.25□□□□□ -1.73
SPG11-206ENST00000558093 RHOP08100 348 aa4.25□□□□□ -1.73
SPG11-206ENST00000558093 ATXN1LP0C7T5 689 aaKnown RBP4.25□□□□□ -1.73
SPG11-206ENST00000558093 MAPK10P53779 464 aa4.25□□□□□ -1.73
SPG11-206ENST00000558093 LOXL3P58215 753 aa4.25□□□□□ -1.73
SPG11-206ENST00000558093 EIF2B5Q13144 721 aaKnown RBP4.25□□□□□ -1.73
SPG11-206ENST00000558093 LRRC41Q15345 812 aa4.25□□□□□ -1.73
SPG11-206ENST00000558093 TXNRD1Q16881 649 aa4.25□□□□□ -1.73
SPG11-206ENST00000558093 LONRF3Q496Y0 759 aa4.25□□□□□ -1.73
SPG11-206ENST00000558093 MINDY4Q4G0A6 757 aa4.25□□□□□ -1.73
SPG11-206ENST00000558093 FAM102BQ5T8I3 360 aa4.25□□□□□ -1.73
SPG11-206ENST00000558093 TMEM108Q6UXF1 575 aa4.25□□□□□ -1.73
SPG11-206ENST00000558093 TMPRSS9Q7Z410 1059 aa4.25□□□□□ -1.73
SPG11-206ENST00000558093 PPP1R32Q7Z5V6 425 aa4.25□□□□□ -1.73
SPG11-206ENST00000558093 ARHGEF25Q86VW2 580 aa4.25□□□□□ -1.73
SPG11-206ENST00000558093 ADGRG3Q86Y34 549 aa4.25□□□□□ -1.73
SPG11-206ENST00000558093 BOLLQ8N9W6 283 aaKnown RBP4.25□□□□□ -1.73
SPG11-206ENST00000558093 FKBP10Q96AY3 582 aa4.25□□□□□ -1.73
SPG11-206ENST00000558093 FAM136AQ96C01 138 aa4.25□□□□□ -1.73
SPG11-206ENST00000558093 MOGAT1Q96PD6 335 aa4.25□□□□□ -1.73
SPG11-206ENST00000558093 OSBPL9Q96SU4 736 aa4.25□□□□□ -1.73
SPG11-206ENST00000558093 SYNPO2LQ9H987 977 aa4.25□□□□□ -1.73
SPG11-206ENST00000558093 GABBR1Q9UBS5 961 aa4.25□□□□□ -1.73
SPG11-206ENST00000558093 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.25□□□□□ -1.73
SPG11-206ENST00000558093 ARHGEF17Q96PE2 2063 aaPredicted RBP4.25□□□□□ -1.73
SPG11-206ENST00000558093 A0A088AWK7 358 aa4.24□□□□□ -1.73
SPG11-206ENST00000558093 ADM5C9JUS6 153 aa4.24□□□□□ -1.73
SPG11-206ENST00000558093 MGST3O14880 152 aa4.24□□□□□ -1.73
SPG11-206ENST00000558093 PPM1GO15355 546 aaPredicted RBP4.24□□□□□ -1.73
SPG11-206ENST00000558093 DNAJB5O75953 348 aa4.24□□□□□ -1.73
SPG11-206ENST00000558093 URI1O94763 535 aaPredicted RBP4.24□□□□□ -1.73
SPG11-206ENST00000558093 GRIA3P42263 894 aa4.24□□□□□ -1.73
SPG11-206ENST00000558093 PXNP49023 591 aaPredicted RBP4.24□□□□□ -1.73
SPG11-206ENST00000558093 RARRES1P49788 294 aa4.24□□□□□ -1.73
SPG11-206ENST00000558093 TCF15Q12870 199 aa4.24□□□□□ -1.73
SPG11-206ENST00000558093 MLC1Q15049 377 aa4.24□□□□□ -1.73
SPG11-206ENST00000558093 IQCB1Q15051 598 aa4.24□□□□□ -1.73
SPG11-206ENST00000558093 PTPRRQ15256 657 aa4.24□□□□□ -1.73
SPG11-206ENST00000558093 NFE2Q16621 373 aaPredicted RBP4.24□□□□□ -1.73
SPG11-206ENST00000558093 FAM153CQ494X1 144 aa4.24□□□□□ -1.73
SPG11-206ENST00000558093 ANO6Q4KMQ2 910 aa4.24□□□□□ -1.73
SPG11-206ENST00000558093 ARHGAP29Q52LW3 1261 aa4.24□□□□□ -1.73
SPG11-206ENST00000558093 TEDDM1Q5T9Z0 273 aa4.24□□□□□ -1.73
SPG11-206ENST00000558093 B3GNT9Q6UX72 402 aa4.24□□□□□ -1.73
SPG11-206ENST00000558093 ZNF783Q6ZMS7 281 aa4.24□□□□□ -1.73
SPG11-206ENST00000558093 NELL1Q92832 810 aa4.24□□□□□ -1.73
SPG11-206ENST00000558093 PDLIM2Q96JY6 352 aa4.24□□□□□ -1.73
SPG11-206ENST00000558093 PBKQ96KB5 322 aa4.24□□□□□ -1.73
SPG11-206ENST00000558093 NT5C1BQ96P26 610 aa4.24□□□□□ -1.73
SPG11-206ENST00000558093 P2RX7Q99572 595 aaKnown RBP4.24□□□□□ -1.73
SPG11-206ENST00000558093 ALG8Q9BVK2 526 aa4.24□□□□□ -1.73
SPG11-206ENST00000558093 B3GNT5Q9BYG0 378 aa4.24□□□□□ -1.73
SPG11-206ENST00000558093 FAM204AQ9H8W3 233 aa4.24□□□□□ -1.73
SPG11-206ENST00000558093 KLC4Q9NSK0 619 aa4.24□□□□□ -1.73
SPG11-206ENST00000558093 FOXJ2Q9P0K8 574 aa4.24□□□□□ -1.73
SPG11-206ENST00000558093 PTGFRNQ9P2B2 879 aa4.24□□□□□ -1.73
SPG11-206ENST00000558093 SLC17A6Q9P2U8 582 aa4.24□□□□□ -1.73
SPG11-206ENST00000558093 TMX2Q9Y320 296 aa4.24□□□□□ -1.73
SPG11-206ENST00000558093 CAPN8A6NHC0 703 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms