RNA–Protein interactions for RNA: ENST00000557945.5

CASC4-204, Transcript of cancer susceptibility 4, humanhuman

TSL 1 (best)

Gene CASC4, Length 1,386 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-204ENST00000557945 YWHAEP62258 255 aaKnown RBP22.71■■□□□ 1.23
CASC4-204ENST00000557945 TSPY1Q01534 308 aa22.71■■□□□ 1.23
CASC4-204ENST00000557945 GCNT1Q02742 428 aa22.71■■□□□ 1.23
CASC4-204ENST00000557945 SLC8B1Q6J4K2 584 aa22.71■■□□□ 1.23
CASC4-204ENST00000557945 PALB2Q86YC2 1186 aa22.71■■□□□ 1.23
CASC4-204ENST00000557945 FAM81BQ96LP2 452 aa22.71■■□□□ 1.23
CASC4-204ENST00000557945 ACBD6Q9BR61 282 aa22.71■■□□□ 1.23
CASC4-204ENST00000557945 IGFLR1Q9H665 355 aa22.71■■□□□ 1.23
CASC4-204ENST00000557945 FAM207AQ9NSI2 230 aaPredicted RBP22.71■■□□□ 1.23
CASC4-204ENST00000557945 BARX2Q9UMQ3 279 aaPredicted RBP22.71■■□□□ 1.23
CASC4-204ENST00000557945 SIK3Q9Y2K2 1263 aa22.71■■□□□ 1.23
CASC4-204ENST00000557945 CBFA2T2O43439 604 aa22.7■■□□□ 1.22
CASC4-204ENST00000557945 CLASP2O75122 1294 aaKnown RBP22.7■■□□□ 1.22
CASC4-204ENST00000557945 KLHDC7AQ5VTJ3 777 aa22.7■■□□□ 1.22
CASC4-204ENST00000557945 TTC39CQ8N584 583 aa22.7■■□□□ 1.22
CASC4-204ENST00000557945 NEK11Q8NG66 645 aa22.7■■□□□ 1.22
CASC4-204ENST00000557945 KREMEN1Q96MU8 473 aa22.7■■□□□ 1.22
CASC4-204ENST00000557945 SYT15Q9BQS2 421 aa22.7■■□□□ 1.22
CASC4-204ENST00000557945 XPO4Q9C0E2 1151 aaKnown RBP22.7■■□□□ 1.22
CASC4-204ENST00000557945 ZCWPW1Q9H0M4 648 aa22.7■■□□□ 1.22
CASC4-204ENST00000557945 DNAJC12Q9UKB3 198 aa22.7■■□□□ 1.22
CASC4-204ENST00000557945 CDH9Q9ULB4 789 aa22.7■■□□□ 1.22
CASC4-204ENST00000557945 PRRC2BQ5JSZ5 2229 aaKnown RBP22.69■■□□□ 1.22
CASC4-204ENST00000557945 PSMC1P62191 440 aaKnown RBP22.69■■□□□ 1.22
CASC4-204ENST00000557945 ROR1Q01973 937 aa22.69■■□□□ 1.22
CASC4-204ENST00000557945 INCA1Q0VD86 236 aa22.69■■□□□ 1.22
CASC4-204ENST00000557945 ORC1Q13415 861 aa22.69■■□□□ 1.22
CASC4-204ENST00000557945 RAB33AQ14088 237 aa22.69■■□□□ 1.22
CASC4-204ENST00000557945 DUSP6Q16828 381 aa22.69■■□□□ 1.22
CASC4-204ENST00000557945 ARHGAP44Q17R89 818 aa22.69■■□□□ 1.22
CASC4-204ENST00000557945 ZNF394Q53GI3 561 aa22.69■■□□□ 1.22
CASC4-204ENST00000557945 DPY19L2P1Q6NXN4 242 aa22.69■■□□□ 1.22
CASC4-204ENST00000557945 ENOSF1Q7L5Y1 443 aa22.69■■□□□ 1.22
CASC4-204ENST00000557945 UNC93AQ86WB7 457 aa22.69■■□□□ 1.22
CASC4-204ENST00000557945 DCP1BQ8IZD4 617 aaKnown RBP22.69■■□□□ 1.22
CASC4-204ENST00000557945 PLCB1Q9NQ66 1216 aa22.69■■□□□ 1.22
CASC4-204ENST00000557945 HMGXB4Q9UGU5 601 aa22.69■■□□□ 1.22
CASC4-204ENST00000557945 NME7Q9Y5B8 376 aa22.69■■□□□ 1.22
CASC4-204ENST00000557945 PCDHB4Q9Y5E5 795 aa22.69■■□□□ 1.22
CASC4-204ENST00000557945 ATP2C2O75185 946 aa22.68■■□□□ 1.22
CASC4-204ENST00000557945 CILPO75339 1184 aa22.68■■□□□ 1.22
CASC4-204ENST00000557945 CDR1P51861 262 aa22.68■■□□□ 1.22
CASC4-204ENST00000557945 RAPGEF1Q13905 1077 aa22.68■■□□□ 1.22
CASC4-204ENST00000557945 SLC39A12Q504Y0 691 aa22.68■■□□□ 1.22
CASC4-204ENST00000557945 INTS6LQ5JSJ4 861 aaKnown RBP22.68■■□□□ 1.22
CASC4-204ENST00000557945 IQCEQ6IPM2 695 aa22.68■■□□□ 1.22
CASC4-204ENST00000557945 PPFIBP1Q86W92 1011 aa22.68■■□□□ 1.22
CASC4-204ENST00000557945 TNIP3Q96KP6 325 aa22.68■■□□□ 1.22
CASC4-204ENST00000557945 PGLYRP2Q96PD5 576 aa22.68■■□□□ 1.22
CASC4-204ENST00000557945 CDCA3Q99618 268 aaPredicted RBP22.68■■□□□ 1.22
CASC4-204ENST00000557945 NT5C1AQ9BXI3 368 aa22.68■■□□□ 1.22
CASC4-204ENST00000557945 DNAI2Q9GZS0 605 aa22.68■■□□□ 1.22
CASC4-204ENST00000557945 DPEP3Q9H4B8 488 aa22.68■■□□□ 1.22
CASC4-204ENST00000557945 FHOD1Q9Y613 1164 aa22.68■■□□□ 1.22
CASC4-204ENST00000557945 ATG2AQ2TAZ0 1938 aa22.68■■□□□ 1.22
CASC4-204ENST00000557945 SZT2Q5T011 3432 aa22.67■■□□□ 1.22
CASC4-204ENST00000557945 A0A1W2PQC6 194 aa22.67■■□□□ 1.22
CASC4-204ENST00000557945 WDR27A2RRH5 827 aa22.67■■□□□ 1.22
CASC4-204ENST00000557945 GLUD1P00367 558 aa22.67■■□□□ 1.22
CASC4-204ENST00000557945 UCHL3P15374 230 aa22.67■■□□□ 1.22
CASC4-204ENST00000557945 TRIM21P19474 475 aaKnown RBP22.67■■□□□ 1.22
CASC4-204ENST00000557945 GTF2F1P35269 517 aaKnown RBP eCLIP22.67■■□□□ 1.22
CASC4-204ENST00000557945 POLR2FP61218 127 aaKnown RBP22.67■■□□□ 1.22
CASC4-204ENST00000557945 HYAL1Q12794 435 aa22.67■■□□□ 1.22
CASC4-204ENST00000557945 LLGL2Q6P1M3 1020 aa22.67■■□□□ 1.22
CASC4-204ENST00000557945 ACOT1Q86TX2 421 aa22.67■■□□□ 1.22
CASC4-204ENST00000557945 LRRTM3Q86VH5 581 aa22.67■■□□□ 1.22
CASC4-204ENST00000557945 TWNKQ96RR1 684 aa22.67■■□□□ 1.22
CASC4-204ENST00000557945 ELOVL4Q9GZR5 314 aa22.67■■□□□ 1.22
CASC4-204ENST00000557945 GANQ9H2C0 597 aa22.67■■□□□ 1.22
CASC4-204ENST00000557945 FAM124BQ9H5Z6 455 aaPredicted RBP22.67■■□□□ 1.22
CASC4-204ENST00000557945 AJAP1Q9UKB5 411 aaPredicted RBP22.67■■□□□ 1.22
CASC4-204ENST00000557945 GTF3C4Q9UKN8 822 aa22.67■■□□□ 1.22
CASC4-204ENST00000557945 MYBPHLA2RUH7 354 aa22.66■■□□□ 1.22
CASC4-204ENST00000557945 TGM5O43548 720 aa22.66■■□□□ 1.22
CASC4-204ENST00000557945 SPATA31D3P0C874 917 aa22.66■■□□□ 1.22
CASC4-204ENST00000557945 KRT5P13647 590 aa22.66■■□□□ 1.22
CASC4-204ENST00000557945 PTPN1P18031 435 aaKnown RBP22.66■■□□□ 1.22
CASC4-204ENST00000557945 RFX1P22670 979 aa22.66■■□□□ 1.22
CASC4-204ENST00000557945 USP8P40818 1118 aa22.66■■□□□ 1.22
CASC4-204ENST00000557945 CLCN4P51793 760 aa22.66■■□□□ 1.22
CASC4-204ENST00000557945 GPR17Q13304 367 aa22.66■■□□□ 1.22
CASC4-204ENST00000557945 CCDC85BQ15834 202 aaPredicted RBP22.66■■□□□ 1.22
CASC4-204ENST00000557945 UVSSAQ2YD98 709 aa22.66■■□□□ 1.22
CASC4-204ENST00000557945 MDH1BQ5I0G3 518 aa22.66■■□□□ 1.22
CASC4-204ENST00000557945 TMEM270Q6UE05 265 aa22.66■■□□□ 1.22
CASC4-204ENST00000557945 RNF19BQ6ZMZ0 732 aa22.66■■□□□ 1.22
CASC4-204ENST00000557945 SPATA31D4Q6ZUB0 917 aa22.66■■□□□ 1.22
CASC4-204ENST00000557945 B3GALNT2Q8NCR0 500 aa22.66■■□□□ 1.22
CASC4-204ENST00000557945 WHAMMQ8TF30 809 aa22.66■■□□□ 1.22
CASC4-204ENST00000557945 JAKMIP2Q96AA8 810 aa22.66■■□□□ 1.22
CASC4-204ENST00000557945 LPIN3Q9BQK8 851 aa22.66■■□□□ 1.22
CASC4-204ENST00000557945 TRIM5Q9C035 493 aa22.66■■□□□ 1.22
CASC4-204ENST00000557945 EPHB6O15197 1021 aa22.65■■□□□ 1.22
CASC4-204ENST00000557945 NOL4O94818 638 aa22.65■■□□□ 1.22
CASC4-204ENST00000557945 ACO1P21399 889 aaKnown RBP22.65■■□□□ 1.22
CASC4-204ENST00000557945 CCDC142Q17RM4 750 aa22.65■■□□□ 1.22
CASC4-204ENST00000557945 SARM1Q6SZW1 724 aa22.65■■□□□ 1.22
CASC4-204ENST00000557945 UBR7Q8N806 425 aa22.65■■□□□ 1.22
CASC4-204ENST00000557945 ZNF461Q8TAF7 563 aa22.65■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms