RNA–Protein interactions for RNA: ENST00000557782.1

TDP1-217, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 318 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-217ENST00000557782 GLULP15104 373 aa4.26□□□□□ -1.73
TDP1-217ENST00000557782 TPH1P17752 444 aa4.26□□□□□ -1.73
TDP1-217ENST00000557782 PHKA1P46020 1223 aa4.26□□□□□ -1.73
TDP1-217ENST00000557782 GLRBP48167 497 aa4.26□□□□□ -1.73
TDP1-217ENST00000557782 MCM2P49736 904 aa4.26□□□□□ -1.73
TDP1-217ENST00000557782 HK2P52789 917 aa4.26□□□□□ -1.73
TDP1-217ENST00000557782 KRT83P78385 493 aa4.26□□□□□ -1.73
TDP1-217ENST00000557782 SP140Q13342 867 aa4.26□□□□□ -1.73
TDP1-217ENST00000557782 AMOTQ4VCS5 1084 aa4.26□□□□□ -1.73
TDP1-217ENST00000557782 CCDC92Q53HC0 331 aaPredicted RBP4.26□□□□□ -1.73
TDP1-217ENST00000557782 SLC9C2Q5TAH2 1124 aa4.26□□□□□ -1.73
TDP1-217ENST00000557782 FAXCQ5TGI0 409 aa4.26□□□□□ -1.73
TDP1-217ENST00000557782 TMEM200BQ69YZ2 307 aa4.26□□□□□ -1.73
TDP1-217ENST00000557782 SLC30A6Q6NXT4 461 aa4.26□□□□□ -1.73
TDP1-217ENST00000557782 PRR23CQ6ZRP0 262 aa4.26□□□□□ -1.73
TDP1-217ENST00000557782 TMTC3Q6ZXV5 915 aa4.26□□□□□ -1.73
TDP1-217ENST00000557782 KRT74Q7RTS7 529 aa4.26□□□□□ -1.73
TDP1-217ENST00000557782 NLRX1Q86UT6 975 aa4.26□□□□□ -1.73
TDP1-217ENST00000557782 ALYREFQ86V81 257 aaKnown RBP4.26□□□□□ -1.73
TDP1-217ENST00000557782 ARMC8Q8IUR7 673 aa4.26□□□□□ -1.73
TDP1-217ENST00000557782 CCDC28AQ8IWP9 274 aa4.26□□□□□ -1.73
TDP1-217ENST00000557782 LILRA2Q8N149 483 aa4.26□□□□□ -1.73
TDP1-217ENST00000557782 NGEFQ8N5V2 710 aa4.26□□□□□ -1.73
TDP1-217ENST00000557782 DTX3Q8N9I9 347 aa4.26□□□□□ -1.73
TDP1-217ENST00000557782 USP38Q8NB14 1042 aa4.26□□□□□ -1.73
TDP1-217ENST00000557782 TBC1D22AQ8WUA7 517 aa4.26□□□□□ -1.73
TDP1-217ENST00000557782 C3orf49Q96BT1 292 aa4.26□□□□□ -1.73
TDP1-217ENST00000557782 RADILQ96JH8 1075 aa4.26□□□□□ -1.73
TDP1-217ENST00000557782 TMEM209Q96SK2 561 aa4.26□□□□□ -1.73
TDP1-217ENST00000557782 SLF1Q9BQI6 1058 aa4.26□□□□□ -1.73
TDP1-217ENST00000557782 TACO1Q9BSH4 297 aaKnown RBP4.26□□□□□ -1.73
TDP1-217ENST00000557782 MS4A7Q9GZW8 240 aaPredicted RBP4.26□□□□□ -1.73
TDP1-217ENST00000557782 ELAC1Q9H777 363 aaKnown RBP4.26□□□□□ -1.73
TDP1-217ENST00000557782 ACAD9Q9H845 621 aa4.26□□□□□ -1.73
TDP1-217ENST00000557782 PLSCR4Q9NRQ2 329 aa4.26□□□□□ -1.73
TDP1-217ENST00000557782 ZSCAN32Q9NX65 697 aa4.26□□□□□ -1.73
TDP1-217ENST00000557782 RBPJLQ9UBG7 517 aa4.26□□□□□ -1.73
TDP1-217ENST00000557782 Q9UFV3 132 aa4.26□□□□□ -1.73
TDP1-217ENST00000557782 C19orf53Q9UNZ5 99 aaPredicted RBP4.26□□□□□ -1.73
TDP1-217ENST00000557782 CNPY2Q9Y2B0 182 aa4.26□□□□□ -1.73
TDP1-217ENST00000557782 DERAQ9Y315 318 aa4.26□□□□□ -1.73
TDP1-217ENST00000557782 DTNAQ9Y4J8 743 aa4.26□□□□□ -1.73
TDP1-217ENST00000557782 LOC102723971A0A1B0GUV8 181 aa4.25□□□□□ -1.73
TDP1-217ENST00000557782 NOTOA8MTQ0 251 aa4.25□□□□□ -1.73
TDP1-217ENST00000557782 GTPBP1O00178 669 aaKnown RBP4.25□□□□□ -1.73
TDP1-217ENST00000557782 AP3D1O14617 1153 aa4.25□□□□□ -1.73
TDP1-217ENST00000557782 N4BP3O15049 544 aa4.25□□□□□ -1.73
TDP1-217ENST00000557782 SPTLC2O15270 562 aa4.25□□□□□ -1.73
TDP1-217ENST00000557782 CCP110O43303 1012 aa4.25□□□□□ -1.73
TDP1-217ENST00000557782 DNPH1O43598 174 aa4.25□□□□□ -1.73
TDP1-217ENST00000557782 COBLO75128 1261 aa4.25□□□□□ -1.73
TDP1-217ENST00000557782 ITGA10O75578 1167 aa4.25□□□□□ -1.73
TDP1-217ENST00000557782 ALDH1A2O94788 518 aa4.25□□□□□ -1.73
TDP1-217ENST00000557782 SGPL1O95470 568 aa4.25□□□□□ -1.73
TDP1-217ENST00000557782 GJB1P08034 283 aa4.25□□□□□ -1.73
TDP1-217ENST00000557782 CSF1P09603 554 aa4.25□□□□□ -1.73
TDP1-217ENST00000557782 ACADMP11310 421 aa4.25□□□□□ -1.73
TDP1-217ENST00000557782 GYPEP15421 78 aa4.25□□□□□ -1.73
TDP1-217ENST00000557782 PECAM1P16284 738 aaPredicted RBP4.25□□□□□ -1.73
TDP1-217ENST00000557782 FPR1P21462 350 aa4.25□□□□□ -1.73
TDP1-217ENST00000557782 PSMC2P35998 433 aaKnown RBP4.25□□□□□ -1.73
TDP1-217ENST00000557782 ARL3P36405 182 aa4.25□□□□□ -1.73
TDP1-217ENST00000557782 GMPRP36959 345 aa4.25□□□□□ -1.73
TDP1-217ENST00000557782 UBA7P41226 1012 aa4.25□□□□□ -1.73
TDP1-217ENST00000557782 CPT1AP50416 773 aa4.25□□□□□ -1.73
TDP1-217ENST00000557782 UCP3P55916 312 aa4.25□□□□□ -1.73
TDP1-217ENST00000557782 DLG4P78352 724 aa4.25□□□□□ -1.73
TDP1-217ENST00000557782 DUSP2Q05923 314 aa4.25□□□□□ -1.73
TDP1-217ENST00000557782 ZP2Q05996 745 aa4.25□□□□□ -1.73
TDP1-217ENST00000557782 ARHGEF7Q14155 803 aa4.25□□□□□ -1.73
TDP1-217ENST00000557782 EIF4A2Q14240 407 aaKnown RBP4.25□□□□□ -1.73
TDP1-217ENST00000557782 WTAPQ15007 396 aa4.25□□□□□ -1.73
TDP1-217ENST00000557782 RPS6KA2Q15349 733 aa4.25□□□□□ -1.73
TDP1-217ENST00000557782 GPR68Q15743 365 aa4.25□□□□□ -1.73
TDP1-217ENST00000557782 CR1LQ2VPA4 569 aa4.25□□□□□ -1.73
TDP1-217ENST00000557782 NAA35Q5VZE5 725 aa4.25□□□□□ -1.73
TDP1-217ENST00000557782 RAP1GAP2Q684P5 730 aa4.25□□□□□ -1.73
TDP1-217ENST00000557782 RRAGAQ7L523 313 aa4.25□□□□□ -1.73
TDP1-217ENST00000557782 ZNF572Q7Z3I7 529 aaPredicted RBP4.25□□□□□ -1.73
TDP1-217ENST00000557782 R3HCC1LQ7Z5L2 792 aaKnown RBP4.25□□□□□ -1.73
TDP1-217ENST00000557782 ANKS1BQ7Z6G8 1248 aa4.25□□□□□ -1.73
TDP1-217ENST00000557782 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.25□□□□□ -1.73
TDP1-217ENST00000557782 ZSCAN30Q86W11 494 aa4.25□□□□□ -1.73
TDP1-217ENST00000557782 PDSS2Q86YH6 399 aa4.25□□□□□ -1.73
TDP1-217ENST00000557782 IRF2BP1Q8IU81 584 aa4.25□□□□□ -1.73
TDP1-217ENST00000557782 RASGRP3Q8IV61 690 aa4.25□□□□□ -1.73
TDP1-217ENST00000557782 CHCHD4Q8N4Q1 142 aa4.25□□□□□ -1.73
TDP1-217ENST00000557782 IL17RDQ8NFM7 739 aa4.25□□□□□ -1.73
TDP1-217ENST00000557782 FBXO18Q8NFZ0 1043 aa4.25□□□□□ -1.73
TDP1-217ENST00000557782 OR1N1Q8NGS0 311 aa4.25□□□□□ -1.73
TDP1-217ENST00000557782 CPT1CQ8TCG5 803 aa4.25□□□□□ -1.73
TDP1-217ENST00000557782 CSGALNACT1Q8TDX6 532 aa4.25□□□□□ -1.73
TDP1-217ENST00000557782 STON2Q8WXE9 905 aa4.25□□□□□ -1.73
TDP1-217ENST00000557782 CPT1BQ92523 772 aa4.25□□□□□ -1.73
TDP1-217ENST00000557782 ALG3Q92685 438 aa4.25□□□□□ -1.73
TDP1-217ENST00000557782 NKD2Q969F2 451 aaPredicted RBP4.25□□□□□ -1.73
TDP1-217ENST00000557782 GFM2Q969S9 779 aaKnown RBP4.25□□□□□ -1.73
TDP1-217ENST00000557782 TP53INP1Q96A56 240 aa4.25□□□□□ -1.73
TDP1-217ENST00000557782 NSUN4Q96CB9 384 aaKnown RBP4.25□□□□□ -1.73
TDP1-217ENST00000557782 RNF125Q96EQ8 232 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms